Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1481.2 Capsicum annuum HOM05D006994 ORTHO05D008229 0.0e+00 2144.4 1075 100.0
CAN.G1332.1 Capsicum annuum HOM05D006994 ORTHO05D008229 0.0e+00 1923.7 1082 90.8
CAN.G585.58 Capsicum annuum HOM05D006994 ORTHO05D008229 0.0e+00 1768.4 1087 83.9
PGSC0003DMG400017294 Solanum tuberosum HOM05D006994 ORTHO05D008229 0.0e+00 1413.7 1117 69.0
Sopen07g029270 Solanum pennellii HOM05D006994 ORTHO05D008229 0.0e+00 1393.6 1113 68.8
Nitab4.5_0007153g0010 Nicotiana tabacum HOM05D006994 ORTHO05D008229 0.0e+00 1248.4 1116 62.5
Solyc07g055910.4 Solanum lycopersicum HOM05D006994 ORTHO05D008229 0.0e+00 1219.1 1001 67.5
Nitab4.5_0001121g0180 Nicotiana tabacum HOM05D006994 ORTHO05D008229 1.2e-309 1066.6 1150 54.3
Peaxi162Scf00154g00620 Petunia axillaris HOM05D006994 ORTHO05D008229 3.8e-274 948.7 937 58.8
Sopen06g004440 Solanum pennellii HOM05D006994 ORTHO05D008229 7.9e-232 808.1 923 53.6
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 5.9e-102 376.7 1264 29.9
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 5.7e-97 360.1 1250 30.8
Cc05_g09220 Coffea canephora HOM05D006994 ORTHO05D008229 1.7e-88 332.0 1223 28.5
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 3.7e-80 304.3 1013 30.0
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 5.6e-68 263.8 1189 27.9
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 1.2e-59 236.1 982 28.0
Solyc06g009803.1 Solanum lycopersicum HOM05D006994 ORTHO05D008229 9.9e-57 226.5 144 81.2
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 3.6e-51 208.0 1132 27.1
Oeu041607.1 Olea europaea HOM05D006994 ORTHO05D008229 9.3e-47 193.4 651 27.5
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 3.9e-45 188.0 982 25.1
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 5.1e-45 187.6 1286 23.8
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 5.1e-45 187.6 1156 25.0
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 4.0e-42 177.9 1148 25.6
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 5.3e-42 177.6 917 25.2
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 6.9e-42 177.2 1197 25.1
MSTRG.15058 Avicennia marina HOM05D006994 ORTHO05D008229 2.4e-39 168.7 1189 24.2
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 9.3e-39 166.8 1286 24.0
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 5.1e-37 161.0 894 24.7
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 4.3e-36 157.9 1135 24.3
Nn6g34417 Nelumbo nucifera HOM05D006994 ORTHO05D008229 2.8e-35 155.2 1288 24.4
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 5.3e-34 151.0 1150 24.3
SalBow7G4498 Salvia bowleyana HOM05D006994 ORTHO05D008229 9.0e-34 150.2 1169 24.7
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 1.5e-33 149.4 1094 23.7
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 3.4e-33 148.3 747 25.2
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 6.4e-32 144.1 1183 24.8
Actinidia11193 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.4e-31 142.9 1058 25.5
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 7.1e-31 140.6 1267 24.0
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 1.2e-30 139.8 834 25.1
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 1.2e-30 139.8 1264 23.3
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 4.6e-30 137.9 1269 23.5
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 1.0e-29 136.7 1264 23.3
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 5.1e-29 134.4 1272 23.6
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 1.3e-27 129.8 1272 23.7
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 2.1e-27 129.0 1168 23.7
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 6.2e-27 127.5 1020 23.9
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 8.2e-27 127.1 1285 23.1
DCAR_021306 Daucus carota HOM05D006994 ORTHO05D008229 1.0e-24 120.2 722 25.5
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 9.3e-23 113.6 1213 23.2
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 3.3e-20 105.1 1126 23.7
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 5.7e-20 104.4 1127 23.3
PGR042G2686 Punica granatum HOM05D006994 ORTHO05D008229 9.7e-20 103.6 1210 24.2
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 1.3e-19 103.2 1191 22.4
MELO3C014460.2 Cucumis melo HOM05D006994 ORTHO05D008229 2.0e-17 95.9 1189 21.5
Gohir.A09G006700 Gossypium hirsutum HOM05D006994 ORTHO05D008229 3.4e-17 95.1 1173 22.3
PSO541G2047 Papaver somniferum HOM05D006994 ORTHO05D008229 1.1e-15 90.1 710 23.5
MSTRG.6762 Avicennia marina HOM05D006994 ORTHO05D008229 1.4e-15 89.7 1109 22.7
Sed0021960 Sechium edule HOM05D006994 ORTHO05D008229 7.2e-15 87.4 1219 22.7
Sed0007753 Sechium edule HOM05D006994 ORTHO05D008229 2.1e-14 85.9 1136 22.7
vmacro12443 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 2.7e-14 85.5 276 32.6
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 1.8e-13 82.8 1161 22.4
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 3.9e-13 81.6 1240 22.4
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 2.5e-12 79.0 1169 22.3
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 5.7e-12 77.8 698 22.1
PSO675G3324 Papaver somniferum HOM05D006994 ORTHO05D008229 7.4e-12 77.4 354 26.3
ClCG09G022300 Citrullus lanatus HOM05D006994 ORTHO05D008229 9.7e-12 77.0 1120 22.0
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 1.8e-10 72.8 863 22.6
Cfa022556 Carpinus fangiana HOM05D006994 ORTHO05D008229 1.4e-07 63.2 148 33.8
Cpa.g.sc50.70 Carica papaya HOM05D006994 ORTHO05D008229 1.9e-07 62.8 118 39.0
Oeu014262.1 Olea europaea HOM05D006994 ORTHO05D008229 1.9e-07 62.8 187 32.6
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 5.5e-07 61.2 781 21.4
CDE02G3923 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 3.6e-06 58.5 1110 21.7
Atru.chr6.1475 Acer truncatum HOM05D006994 ORTHO05D008229 6.1e-06 57.8 100 39.0


User provided reference genes

Program Settings