Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1480.6 Capsicum annuum HOM05D004886 ORTHO05D005868 2.7e-61 238.4 115 100.0
CAN.G74.36 Capsicum annuum HOM05D004886 ORTHO05D005868 3.4e-56 221.5 113 95.6
Nitab4.5_0001476g0110 Nicotiana tabacum HOM05D004886 ORTHO05D005868 7.1e-54 213.8 113 91.2
Nitab4.5_0004264g0010 Nicotiana tabacum HOM05D004886 ORTHO05D005868 1.6e-53 212.6 113 90.3
Solyc01g088350.4 Solanum lycopersicum HOM05D004886 ORTHO05D005868 2.3e-52 208.8 112 91.1
Sopen01g035180 Solanum pennellii HOM05D004886 ORTHO05D005868 2.3e-52 208.8 112 91.1
Peaxi162Scf01124g00012 Petunia axillaris HOM05D004886 ORTHO05D005868 5.1e-52 207.6 111 89.2
Sed0007303 Sechium edule HOM05D004886 ORTHO05D005868 5.3e-49 197.6 113 82.3
Ciclev10022551m.g Citrus clementina HOM05D004886 ORTHO05D005868 9.0e-49 196.8 113 81.4
MELO3C022467.2 Cucumis melo HOM05D004886 ORTHO05D005868 2.0e-48 195.7 113 80.5
MSTRG.28124 Avicennia marina HOM05D004886 ORTHO05D005868 2.6e-48 195.3 113 82.3
Oeu002885.1 Olea europaea HOM05D004886 ORTHO05D005868 2.6e-48 195.3 113 80.5
Prupe.2G110500 Prunus persica HOM05D004886 ORTHO05D005868 2.6e-48 195.3 113 81.4
Hund26556 Selenicereus undatus HOM05D004886 ORTHO05D005868 3.4e-48 194.9 113 79.6
CiPaw.13G020500 Carya illinoinensis HOM05D004886 ORTHO05D005868 1.3e-47 193.0 113 79.6
Cc02_g25880 Coffea canephora HOM05D004886 ORTHO05D005868 1.7e-47 192.6 113 79.6
CsaV3_6G004620 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.7e-47 192.6 113 79.6
Gohir.D04G073000 Gossypium hirsutum HOM05D004886 ORTHO05D005868 2.9e-47 191.8 113 77.9
Gorai.012G082000 Gossypium raimondii HOM05D004886 ORTHO05D005868 2.9e-47 191.8 113 77.9
Potri.014G179500 Populus trichocarpa HOM05D004886 ORTHO05D005868 2.9e-47 191.8 113 78.8
CsaV3_6G021750 Cucumis sativus L. HOM05D004886 ORTHO05D005868 4.9e-47 191.0 113 78.8
CsaV3_6G037000 Cucumis sativus L. HOM05D004886 ORTHO05D005868 4.9e-47 191.0 113 78.8
SalBow4G2359 Salvia bowleyana HOM05D004886 ORTHO05D005868 4.9e-47 191.0 111 79.3
EL10Ac8g19580 Beta vulgaris HOM05D004886 ORTHO05D005868 8.4e-47 190.3 113 78.8
Gohir.A05G333500 Gossypium hirsutum HOM05D004886 ORTHO05D005868 8.4e-47 190.3 113 76.1
Hma1.2p1_0021F.1_g014430 Hydrangea macrophylla HOM05D004886 ORTHO05D005868 8.4e-47 190.3 110 78.2
Glyma.03G100700 Glycine max HOM05D004886 ORTHO05D005868 1.1e-46 189.9 113 78.8
Psat4g216480 Pisum sativum HOM05D004886 ORTHO05D005868 1.1e-46 189.9 113 77.9
Atru.chr5.18 Acer truncatum HOM05D004886 ORTHO05D005868 1.4e-46 189.5 113 77.9
CsaV3_6G006530 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.4e-46 189.5 113 78.8
QL04p024857 Quercus lobata HOM05D004886 ORTHO05D005868 1.4e-46 189.5 112 77.7
Duzib128G0726 Durio zibethinus HOM05D004886 ORTHO05D005868 1.9e-46 189.1 113 78.8
Lalb_Chr07g0194931 Lupinus albus HOM05D004886 ORTHO05D005868 1.9e-46 189.1 113 74.3
PGR044G2350 Punica granatum HOM05D004886 ORTHO05D005868 1.9e-46 189.1 113 78.8
TPR.G17348 Trifolium pratense HOM05D004886 ORTHO05D005868 1.9e-46 189.1 113 77.0
FAN23G1419 Fragaria x ananassa HOM05D004886 ORTHO05D005868 2.4e-46 188.7 109 78.0
Medtr8g009670 Medicago truncatula HOM05D004886 ORTHO05D005868 2.4e-46 188.7 113 78.8
ECA246G0884 Erigeron canadensis HOM05D004886 ORTHO05D005868 3.2e-46 188.3 113 77.9
Manes.05G060800 Manihot esculenta HOM05D004886 ORTHO05D005868 3.2e-46 188.3 113 77.9
VMungo0331G0020 Vigna mungo HOM05D004886 ORTHO05D005868 3.2e-46 188.3 113 76.1
COL.COLO4_20817 Corchorus olitorius HOM05D004886 ORTHO05D005868 4.2e-46 188.0 113 77.9
FAN28G1372 Fragaria x ananassa HOM05D004886 ORTHO05D005868 4.2e-46 188.0 109 77.1
HanXRQChr05g0162431 Helianthus annuus HOM05D004886 ORTHO05D005868 4.2e-46 188.0 113 77.9
Rhsim07G0040800 Rhododendron simsii HOM05D004886 ORTHO05D005868 4.2e-46 188.0 113 76.1
Rhsim07G0041300 Rhododendron simsii HOM05D004886 ORTHO05D005868 4.2e-46 188.0 113 76.1
RhsimUnG0113600 Rhododendron simsii HOM05D004886 ORTHO05D005868 4.2e-46 188.0 113 76.1
CiPaw.14G014400 Carya illinoinensis HOM05D004886 ORTHO05D005868 5.4e-46 187.6 113 77.0
Aqoxy3G02476 Aquilegia oxysepala HOM05D004886 ORTHO05D005868 7.1e-46 187.2 113 76.1
FvH4_1g27010 Fragaria vesca HOM05D004886 ORTHO05D005868 7.1e-46 187.2 109 76.1
MD07G1082600 Malus domestica HOM05D004886 ORTHO05D005868 7.1e-46 187.2 113 77.0
Nn1g07674 Nelumbo nucifera HOM05D004886 ORTHO05D005868 7.1e-46 187.2 113 78.8
TWI59G0909 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 7.1e-46 187.2 113 77.0
vmacro13553 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 7.1e-46 187.2 113 76.1
Phvul.010G040200 Phaseolus vulgaris HOM05D004886 ORTHO05D005868 9.3e-46 186.8 113 76.1
RcHm_v2.0_Chr3g0487321 Rosa chinensis HOM05D004886 ORTHO05D005868 9.3e-46 186.8 109 76.1
GSVIVG01018384001 Vitis vinifera HOM05D004886 ORTHO05D005868 9.3e-46 186.8 110 77.3
Actinidia05803 Actinidia chinensis HOM05D004886 ORTHO05D005868 1.6e-45 186.0 113 76.1
Migut.N01703 Erythranthe guttata HOM05D004886 ORTHO05D005868 1.6e-45 186.0 113 77.0
THA.LOC104817165 Tarenaya hassleriana HOM05D004886 ORTHO05D005868 1.6e-45 186.0 113 76.1
Actinidia30969 Actinidia chinensis HOM05D004886 ORTHO05D005868 2.1e-45 185.7 113 76.1
Eucgr.D01136 Eucalyptus grandis HOM05D004886 ORTHO05D005868 2.1e-45 185.7 113 77.0
Sp5g03060 Schrenkiella parvula HOM05D004886 ORTHO05D005868 2.7e-45 185.3 113 74.3
Lsat_1_v5_gn_6_101400 Lactuca sativa HOM05D004886 ORTHO05D005868 3.5e-45 184.9 113 74.3
unitig_85.g27219 Utricularia gibba HOM05D004886 ORTHO05D005868 6.0e-45 184.1 113 73.5
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 7.9e-45 183.7 109 78.0
Lj3g0025670 Lotus japonicus HOM05D004886 ORTHO05D005868 7.9e-45 183.7 113 76.1
CSS0044670 Camellia sinensis var. sinensis HOM05D004886 ORTHO05D005868 1.0e-44 183.3 113 75.2
CANSAT21G0345 Cannabis sativa HOM05D004886 ORTHO05D005868 1.0e-44 183.3 113 76.1
AUR62034033 Chenopodium quinoa HOM05D004886 ORTHO05D005868 1.0e-44 183.3 109 75.2
FAN26G2919 Fragaria x ananassa HOM05D004886 ORTHO05D005868 1.3e-44 183.0 109 76.1
BcaC02g12300 Brassica carinata HOM05D004886 ORTHO05D005868 2.3e-44 182.2 113 73.5
C04p05420 Brassica napus HOM05D004886 ORTHO05D005868 2.3e-44 182.2 113 73.5
BolC4t22182H Brassica oleracea HOM05D004886 ORTHO05D005868 3.0e-44 181.8 113 73.5
Carub.0005s2688 Capsella rubella HOM05D004886 ORTHO05D005868 3.0e-44 181.8 113 73.5
BcaB02g08829 Brassica carinata HOM05D004886 ORTHO05D005868 6.6e-44 180.6 113 72.6
Prupe.3G009000 Prunus persica HOM05D004886 ORTHO05D005868 6.6e-44 180.6 109 78.0
AL4G43550 Arabidopsis lyrata HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 73.5
AT2G44525 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 73.5
A04p01810 Brassica napus HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 72.6
A05p04680 Brassica napus HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 71.7
BraA04t15905Z Brassica rapa HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 72.6
BraA05t19444Z Brassica rapa HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 71.7
CARHR139740 Cardamine hirsuta HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 73.5
PSO063G1771 Papaver somniferum HOM05D004886 ORTHO05D005868 8.7e-44 180.3 113 72.6
BcaC02g10116 Brassica carinata HOM05D004886 ORTHO05D005868 1.1e-43 179.9 113 72.6
C04p32550 Brassica napus HOM05D004886 ORTHO05D005868 1.1e-43 179.9 113 72.6
BolC4t24818H Brassica oleracea HOM05D004886 ORTHO05D005868 1.1e-43 179.9 113 72.6
PSO782G3769 Papaver somniferum HOM05D004886 ORTHO05D005868 1.1e-43 179.9 113 72.6
Aa31LG1G26120 Aethionema arabicum HOM05D004886 ORTHO05D005868 1.5e-43 179.5 113 71.7
arahy.Tifrunner.gnm1.ann1.FT2T1Y Arachis hypogaea HOM05D004886 ORTHO05D005868 1.9e-43 179.1 118 71.2
Thhalv10001659m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 1.9e-43 179.1 113 72.6
Sp4g26620 Schrenkiella parvula HOM05D004886 ORTHO05D005868 1.9e-43 179.1 109 74.3
TWI14G0309 Tripterygium wilfordii HOM05D004886 ORTHO05D005868 1.9e-43 179.1 113 72.6
Thhalv10006276m.g Eutrema salsugineum HOM05D004886 ORTHO05D005868 3.3e-43 178.3 113 72.6
AT3G60150 Arabidopsis thaliana HOM05D004886 ORTHO05D005868 4.3e-43 177.9 113 71.7
Carub.0004s2709 Capsella rubella HOM05D004886 ORTHO05D005868 5.6e-43 177.6 113 71.7
FAN19G1058 Fragaria x ananassa HOM05D004886 ORTHO05D005868 9.6e-43 176.8 109 74.3
MBI04_g13864_MAGBIO Magnolia biondii HOM05D004886 ORTHO05D005868 1.3e-42 176.4 110 72.7
BcaB02g08189 Brassica carinata HOM05D004886 ORTHO05D005868 3.6e-42 174.9 110 70.9
arahy.Tifrunner.gnm1.ann1.U68WY7 Arachis hypogaea HOM05D004886 ORTHO05D005868 6.2e-42 174.1 118 70.3
DCAR_015764 Daucus carota HOM05D004886 ORTHO05D005868 2.4e-41 172.2 146 58.9
Zm00001eb024270 Zea mays HOM05D004886 ORTHO05D005868 5.3e-41 171.0 110 70.9
Zm00001eb390620 Zea mays HOM05D004886 ORTHO05D005868 5.3e-41 171.0 110 70.0
MD09G1285000 Malus domestica HOM05D004886 ORTHO05D005868 6.9e-41 170.6 121 68.6
Thecc.10G000600 Theobroma cacao HOM05D004886 ORTHO05D005868 9.0e-41 170.2 137 62.8
HPP92_003514 Vanilla planifolia HOM05D004886 ORTHO05D005868 2.6e-40 168.7 113 70.8
HPP92_003510 Vanilla planifolia HOM05D004886 ORTHO05D005868 7.6e-40 167.2 113 69.9
TAR375G0952 Trochodendron aralioides HOM05D004886 ORTHO05D005868 3.8e-39 164.9 99 74.7
SGA_v2.0_scaffold95G28731 Striga asiatica HOM05D004886 ORTHO05D005868 3.2e-38 161.8 113 67.3
CsaV3_UNG176370 Cucumis sativus L. HOM05D004886 ORTHO05D005868 5.5e-38 161.0 122 66.4
Lj9C547T8 Lonicera japonica HOM05D004886 ORTHO05D005868 7.9e-37 157.1 117 65.0
SGA_v2.0_scaffold77G25231 Striga asiatica HOM05D000012 ORTHO05D001060 7.9e-37 157.1 167 50.3
Sed0018381 Sechium edule HOM05D004886 ORTHO05D005868 1.0e-36 156.8 130 65.4
CDE11G0764 Ceratophyllum demersum HOM05D004886 ORTHO05D005868 3.9e-36 154.8 113 63.7
vmacro21096 Vaccinium macrocarpon HOM05D004886 ORTHO05D005868 3.9e-36 154.8 160 52.5
Haze_02935 Corylus avellana HOM05D004886 ORTHO05D005868 6.7e-36 154.1 117 66.7
Sabra14G0137800 Salix brachista HOM05D004886 ORTHO05D005868 9.6e-35 150.2 206 42.7
Ah.09g232340 Amaranthus hybridus HOM05D004886 ORTHO05D005868 1.7e-31 139.4 113 61.1
Dinv44001 Davidia involucrata HOM05D004886 ORTHO05D005868 6.5e-31 137.5 84 70.2
Mapoly0033s0133 Marchantia polymorpha HOM05D004886 ORTHO05D005868 6.5e-31 137.5 106 57.5
Pp3c12_4990 Physcomitrium patens HOM05D004886 ORTHO05D005868 8.4e-31 137.1 109 54.1
ClCG06G000740 Citrullus lanatus HOM05D004886 ORTHO05D005868 1.0e-28 130.2 89 74.2
SHI13674 Sapria himalayana HOM05D004886 ORTHO05D005868 3.3e-27 125.2 86 66.3
BraA05t19447Z Brassica rapa HOM05D004886 ORTHO05D005868 1.8e-25 119.4 81 69.1
BraA05t19448Z Brassica rapa HOM05D004886 ORTHO05D005868 1.8e-25 119.4 81 69.1
Sabra14G0139800 Salix brachista HOM05D004886 ORTHO05D005868 2.5e-22 109.0 63 82.5
AagrBONN_evm.TU.Sc2ySwM_344.1568 Anthoceros agrestis HOM05D004886 ORTHO05D005868 5.5e-22 107.8 84 50.0
Cre12.g496800 Chlamydomonas reinhardtii HOM05D004886 ORTHO05D005868 6.1e-21 104.4 102 43.1
Os03g0590700 Oryza sativa ssp. japonica HOM05D004886 ORTHO05D005868 7.9e-21 104.0 64 78.1
Cpa.g.c35192.2 Carica papaya HOM05D004886 ORTHO05D005868 2.3e-20 102.4 74 68.9
SMO364G0857 Selaginella moellendorffii HOM05D004886 ORTHO05D005868 8.7e-20 100.5 106 43.4
A05p04700 Brassica napus HOM05D004886 ORTHO05D005868 2.2e-18 95.9 65 67.7
ATR0049G020 Amborella trichopoda HOM05D004886 ORTHO05D005868 1.4e-17 93.2 63 69.8
MCO06G183 Micromonas commoda HOM05D004886 ORTHO05D005868 2.6e-16 89.0 106 38.7
Sc23g0004110 Simmondsia chinensis HOM05D004886 ORTHO05D005868 3.4e-16 88.6 53 69.8
Sabra14G0139700 Salix brachista HOM05D004886 ORTHO05D005868 1.3e-15 86.7 52 69.2
Nn1g07677 Nelumbo nucifera HOM05D004886 ORTHO05D005868 6.5e-15 84.3 50 72.0
Cc04_g01570 Coffea canephora HOM05D004886 ORTHO05D005868 3.6e-13 78.6 47 78.7
FAN10G0867 Fragaria x ananassa HOM05D004886 ORTHO05D005868 1.0e-12 77.0 104 45.2
Cpa.g.sc587.3 Carica papaya HOM05D004886 ORTHO05D005868 2.3e-12 75.9 49 67.3
PRCOL_00001209 Prasinoderma coloniale HOM05D004886 ORTHO05D005868 5.1e-12 74.7 114 37.7
MD04G1140000 Malus domestica HOM05D004886 ORTHO05D005868 8.8e-12 73.9 44 70.5
Aa31LG10G14300 Aethionema arabicum HOM05D004886 ORTHO05D005868 4.3e-11 71.6 58 62.1
Dinv43568 Davidia involucrata HOM05D004886 ORTHO05D005868 1.7e-10 69.7 38 73.7
Os10g0571100 Oryza sativa ssp. japonica HOM05D004886 ORTHO05D005868 2.2e-10 69.3 50 58.0
AUR62038597 Chenopodium quinoa HOM05D004886 ORTHO05D005868 2.8e-10 68.9 38 73.7
CsaV3_3G022410 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.1e-09 67.0 38 73.7
CsaV3_5G024660 Cucumis sativus L. HOM05D004886 ORTHO05D005868 1.1e-09 67.0 38 73.7
SalBow2G0716 Salvia bowleyana HOM05D000282 ORTHO05D000272 2.9e-07 58.9 35 77.1
SEGI_24442 Sequoiadendron giganteum HOM05D004886 ORTHO05D005868 1.9e-06 56.2 36 58.3


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