Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.3e-199 699.5 345 100.0
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 2.3e-185 652.1 345 93.9
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 7.5e-184 647.1 345 93.3
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.1e-182 643.3 345 92.8
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.2e-182 641.7 344 92.4
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.5e-168 596.3 316 92.1
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.9e-158 562.8 343 80.2
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.2e-157 560.1 328 83.2
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.1e-157 559.3 338 81.4
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.7e-157 558.9 343 79.9
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 1.7e-156 556.2 345 80.6
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 6.6e-156 554.3 338 78.7
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 6.6e-156 554.3 339 80.8
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 9.6e-155 550.4 323 81.7
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.6e-154 549.7 333 80.8
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 2.8e-154 548.9 339 80.5
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 1.8e-153 546.2 341 78.6
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 5.3e-153 544.7 335 79.1
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 2.0e-152 542.7 326 80.4
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.5e-152 541.6 337 78.6
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 5.8e-152 541.2 326 79.1
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.2e-151 539.3 331 78.9
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 2.2e-151 539.3 330 80.3
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 4.9e-151 538.1 326 80.7
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 6.4e-151 537.7 332 79.5
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.9e-150 536.2 340 78.2
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 2.4e-150 535.8 328 79.0
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 7.1e-150 534.3 343 77.6
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 9.3e-150 533.9 342 77.2
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.6e-149 533.1 322 80.1
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 2.1e-149 532.7 339 77.6
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 2.1e-149 532.7 333 78.4
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.1e-149 532.7 336 77.7
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 2.7e-149 532.3 332 78.6
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 6.0e-149 531.2 321 80.1
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 7.9e-149 530.8 379 71.2
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 1.0e-148 530.4 333 78.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.0e-148 530.4 326 79.1
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.8e-148 529.6 333 78.7
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.3e-148 529.3 351 74.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.1e-148 528.1 315 80.3
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 5.1e-148 528.1 335 78.2
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 6.7e-148 527.7 378 71.2
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.7e-148 527.3 351 74.4
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.5e-147 526.6 351 73.8
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.9e-147 526.2 333 77.2
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.5e-147 525.8 321 80.1
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.3e-147 525.4 342 76.3
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.3e-147 525.0 332 77.4
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 9.6e-147 523.9 343 74.9
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.3e-146 523.5 331 77.9
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.6e-146 523.1 339 76.1
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.6e-146 521.9 351 73.5
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 6.2e-146 521.2 333 76.3
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 6.9e-145 517.7 351 73.5
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 6.9e-145 517.7 341 76.5
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.5e-144 516.5 308 82.8
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.0e-144 516.2 336 74.4
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 4.5e-144 515.0 337 75.4
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 5.8e-144 514.6 338 74.9
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 6.4e-143 511.1 327 77.4
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.4e-142 509.2 374 69.0
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.2e-142 508.8 337 73.6
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 4.2e-142 508.4 316 80.4
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 5.5e-142 508.1 329 76.3
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.6e-141 506.5 327 77.1
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 4.6e-141 505.0 322 76.4
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 4.6e-141 505.0 327 77.1
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 5.1e-140 501.5 343 72.9
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.5e-139 500.0 338 74.0
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.6e-138 496.5 373 69.2
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.1e-138 496.1 337 72.7
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.1e-137 493.8 337 72.4
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 3.1e-137 492.3 328 75.0
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 4.0e-137 491.9 322 75.5
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 2.2e-135 486.1 284 83.8
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-134 483.8 336 71.4
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.2e-134 482.3 322 75.8
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 9.3e-134 480.7 313 76.7
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 6.0e-133 478.0 397 64.2
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 3.9e-132 475.3 293 78.8
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.5e-131 473.4 316 72.8
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 5.7e-131 471.5 332 70.2
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 7.4e-131 471.1 308 77.9
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.1e-130 469.5 359 68.0
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.1e-130 469.5 359 68.0
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.1e-130 469.5 377 65.0
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 8.2e-130 467.6 343 70.6
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 4.1e-129 465.3 326 70.2
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 5.3e-129 464.9 360 67.8
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 4.5e-128 461.8 269 82.5
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 7.2e-126 454.5 326 69.3
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.6e-125 453.4 286 77.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.2e-122 443.0 384 63.3
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 1.0e-119 434.1 301 71.1
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.7e-119 433.3 284 76.1
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.8e-119 432.2 345 65.2
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 5.0e-119 431.8 284 76.1
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 6.7e-116 421.4 265 78.9
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 5.7e-115 418.3 305 68.2
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.6e-112 409.5 322 60.6
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 2.9e-111 406.0 286 69.9
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.3e-108 396.4 321 59.5
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 3.9e-108 395.6 326 63.5
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 7.4e-107 391.3 294 65.6
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 9.1e-105 384.4 236 81.8
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 4.5e-104 382.1 284 68.7
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.7e-103 380.2 325 57.2
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 6.1e-101 371.7 319 57.4
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 2.4e-97 359.8 284 65.8
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 8.5e-95 351.3 237 72.2
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 2.0e-91 340.1 259 66.8
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 2.2e-90 336.7 316 51.6
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 3.6e-85 319.3 231 65.8
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.8e-84 315.1 221 71.5
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.9e-78 297.0 227 66.5
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.3e-71 274.2 366 41.8
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.0e-56 222.2 146 78.8
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 5.6e-54 215.7 328 38.7
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.6e-53 214.2 184 62.5
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.6e-48 196.1 145 67.6
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 2.4e-44 183.7 144 59.7
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 1.2e-43 181.4 131 66.4
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 4.2e-41 172.9 298 37.2
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.4e-33 147.9 97 74.2
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.0e-18 98.6 82 58.5
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 3.2e-17 93.6 73 61.6
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 8.2e-13 79.0 41 82.9
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.1e-12 77.0 119 42.9


User provided reference genes

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