Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 1.5e-72 276.2 150 100.0
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 8.6e-60 233.8 152 85.5
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 9.5e-59 230.3 152 85.5
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.6e-58 229.6 152 84.9
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.4e-57 225.7 150 81.3
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 4.0e-57 224.9 125 85.6
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.9e-56 220.3 151 80.1
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.3e-55 219.9 125 82.4
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 6.4e-55 217.6 124 83.9
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.4e-54 216.5 150 72.7
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 1.9e-54 216.1 125 79.2
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.4e-54 215.7 124 83.1
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 4.1e-54 214.9 150 78.0
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 9.2e-54 213.8 125 79.2
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 4.6e-53 211.5 147 75.5
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 1.3e-52 209.9 122 81.1
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 5.1e-52 208.0 123 78.0
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 4.3e-51 204.9 124 76.6
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 9.6e-51 203.8 126 76.2
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.6e-50 203.0 124 76.6
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 2.8e-50 202.2 117 81.2
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.8e-50 202.2 126 75.4
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 4.7e-50 201.4 126 75.4
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 8.1e-50 200.7 125 74.4
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.4e-49 199.9 140 75.7
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 2.4e-49 199.1 126 76.2
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 4.0e-49 198.4 126 75.4
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 5.2e-49 198.0 125 74.4
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 5.2e-49 198.0 126 73.0
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 9.0e-49 197.2 125 76.0
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.2e-48 196.8 145 65.5
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 1.2e-48 196.8 126 72.2
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 1.2e-48 196.8 126 73.0
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 2.6e-48 195.7 116 78.4
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 4.4e-48 194.9 151 69.5
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 7.6e-48 194.1 126 71.4
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 9.9e-48 193.7 126 73.8
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.3e-47 193.4 126 72.2
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.3e-47 193.4 126 71.4
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 4.9e-47 191.4 125 72.8
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 8.4e-47 190.7 126 72.2
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.4e-46 189.9 125 72.8
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.9e-46 189.5 128 70.3
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.9e-46 189.5 126 70.6
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.4e-46 189.1 125 69.6
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 4.2e-46 188.3 125 70.4
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 5.4e-46 188.0 126 67.5
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 9.3e-46 187.2 112 75.0
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.2e-45 186.8 117 72.6
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.6e-45 186.4 126 66.7
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 4.6e-45 184.9 126 70.6
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 4.6e-45 184.9 119 72.3
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 4.6e-45 184.9 125 69.6
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 7.8e-45 184.1 100 85.0
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.3e-44 183.3 151 61.6
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-44 183.0 119 69.7
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.3e-44 182.6 138 68.8
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 3.0e-44 182.2 106 79.2
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 8.7e-44 180.6 126 68.3
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 8.7e-44 180.6 119 68.9
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 1.1e-43 180.3 119 68.1
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.1e-43 180.3 119 68.1
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 2.5e-43 179.1 146 65.8
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 3.3e-43 178.7 146 67.8
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 3.3e-43 178.7 125 68.0
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 5.6e-43 177.9 146 59.6
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.3e-42 176.8 167 55.7
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.3e-42 176.8 119 68.9
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 3.6e-42 175.3 118 68.6
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.1e-41 173.7 126 66.7
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.1e-41 173.7 126 65.1
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 4.0e-41 171.8 125 61.6
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 5.3e-41 171.4 118 66.9
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 1.2e-40 170.2 118 66.9
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.5e-40 169.9 117 69.2
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 2.0e-40 169.5 118 66.9
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 3.4e-40 168.7 118 67.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 3.4e-40 168.7 117 68.4
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 3.4e-40 168.7 146 62.3
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 5.8e-40 167.9 145 61.4
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 1.7e-39 166.4 127 64.6
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.2e-39 166.0 127 64.6
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.2e-39 166.0 127 64.6
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.2e-39 166.0 127 64.6
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.2e-39 166.0 127 64.6
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.2e-39 166.0 119 65.5
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 2.9e-39 165.6 145 57.2
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 3.8e-39 165.2 103 72.8
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 4.9e-39 164.9 118 62.7
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 4.9e-39 164.9 122 63.9
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 6.4e-39 164.5 126 61.9
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 8.4e-39 164.1 102 72.5
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 8.4e-39 164.1 102 72.5
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.1e-38 163.7 167 50.9
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.4e-38 163.3 125 60.8
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.4e-38 163.3 118 63.6
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 2.4e-38 162.5 126 62.7
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 3.2e-38 162.2 102 71.6
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 5.4e-38 161.4 127 62.2
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 5.4e-38 161.4 118 64.4
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 9.3e-38 160.6 118 61.9
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.2e-37 160.2 125 58.4
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 4.6e-37 158.3 116 64.7
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 7.9e-37 157.5 104 71.2
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 7.9e-37 157.5 104 71.2
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 7.9e-37 157.5 107 70.1
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 8.7e-36 154.1 120 59.2
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.9e-35 152.9 98 69.4
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.9e-35 152.9 119 58.8
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 8.1e-34 147.5 97 69.1
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 1.1e-33 147.1 126 57.1
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.1e-33 145.6 119 58.8
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.5e-32 143.3 87 77.0
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 2.4e-30 136.0 113 59.3
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 3.2e-30 135.6 84 72.6
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.1e-26 122.9 83 65.1
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 6.2e-26 121.3 101 54.5
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 3.1e-25 119.0 97 50.5
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 9.3e-22 107.5 101 47.5
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 2.7e-21 105.9 97 50.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.8e-20 103.2 61 77.0
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 1.9e-19 99.8 84 59.5
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 9.7e-19 97.4 98 49.0
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 2.8e-18 95.9 61 72.1
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.1e-17 94.0 61 70.5
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 5.3e-17 91.7 66 62.1
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.0e-16 89.7 62 66.1
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.0e-15 87.4 85 49.4
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.3e-15 87.0 61 65.6
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.1e-14 84.0 65 63.1
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.1e-14 84.0 65 63.1
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 3.6e-13 79.0 57 63.2
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 3.9e-12 75.5 52 65.4
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 8.2e-10 67.8 49 65.3
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 1.1e-09 67.4 96 37.5
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.8e-09 66.6 61 54.1
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 3.1e-09 65.9 110 29.1
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 5.0e-07 58.5 34 70.6


User provided reference genes

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