Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 9.3e-220 766.9 494 100.0
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 6.0e-110 402.1 287 67.2
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 5.9e-97 359.0 185 93.0
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.6e-94 350.9 185 91.4
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 6.1e-94 349.0 185 90.8
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 3.9e-93 346.3 349 81.4
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 5.1e-93 345.9 185 88.1
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 7.4e-92 342.0 185 87.0
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 3.7e-91 339.7 185 87.6
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 9.4e-79 298.5 185 71.4
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.3e-77 293.9 185 71.9
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 5.2e-77 292.7 184 69.6
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 5.2e-77 292.7 185 70.8
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 3.3e-76 290.0 344 47.4
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 9.7e-76 288.5 185 69.2
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.7e-75 286.6 185 69.7
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 4.8e-75 286.2 185 69.2
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 2.4e-74 283.9 185 69.7
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 3.1e-74 283.5 185 68.6
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 5.3e-74 282.7 188 69.7
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 5.3e-74 282.7 188 69.7
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 5.3e-74 282.7 185 69.2
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 9.1e-74 282.0 185 70.3
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 2.0e-73 280.8 187 67.4
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 3.5e-73 280.0 185 70.3
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 4.5e-73 279.6 191 66.5
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 4.5e-73 279.6 185 69.2
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 5.9e-73 279.3 185 67.0
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 1.3e-72 278.1 185 65.9
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 2.2e-72 277.3 185 67.6
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 2.2e-72 277.3 185 67.0
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 3.8e-72 276.6 185 65.9
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 6.5e-72 275.8 185 67.0
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 8.5e-72 275.4 185 67.6
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 8.5e-72 275.4 185 68.6
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 8.5e-72 275.4 185 68.6
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.1e-71 275.0 185 68.1
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 1.5e-71 274.6 185 66.5
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.5e-71 274.6 185 67.6
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 3.2e-71 273.5 185 66.5
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 3.2e-71 273.5 185 64.3
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 5.5e-71 272.7 185 66.5
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 5.5e-71 272.7 186 68.8
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 7.2e-71 272.3 185 63.2
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 1.2e-70 271.6 185 63.2
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 4.7e-70 269.6 185 61.6
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 4.7e-70 269.6 185 62.2
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 8.0e-70 268.9 186 66.1
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 8.0e-70 268.9 202 62.4
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.4e-69 268.1 187 65.8
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.4e-69 268.1 185 65.9
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 1.8e-69 267.7 185 62.7
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.3e-69 267.3 185 66.5
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 2.3e-69 267.3 187 62.0
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 5.2e-69 266.2 190 64.7
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 6.7e-69 265.8 186 68.3
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 8.8e-69 265.4 186 68.3
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 1.2e-68 265.0 187 67.4
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.5e-68 264.6 184 64.7
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 7.5e-68 262.3 193 60.1
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 9.7e-68 261.9 184 63.0
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.3e-67 261.5 188 64.4
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 1.7e-67 261.2 201 62.7
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 1.7e-67 261.2 186 64.5
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 1.7e-67 261.2 184 63.6
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.7e-67 261.2 188 64.4
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 2.8e-67 260.4 187 64.2
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 2.8e-67 260.4 186 65.6
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 8.3e-67 258.8 199 58.3
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 1.1e-66 258.5 188 63.3
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 1.1e-66 258.5 185 62.2
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 1.4e-66 258.1 199 58.3
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.8e-66 257.7 205 56.6
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 5.3e-66 256.1 188 62.2
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 5.3e-66 256.1 185 65.4
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 2.7e-65 253.8 185 63.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 7.7e-65 252.3 231 53.7
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 7.7e-65 252.3 185 64.9
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 4.2e-63 246.5 185 59.5
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 5.5e-63 246.1 185 63.2
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 4.8e-59 233.0 185 61.1
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 5.4e-58 229.6 185 60.5
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 5.4e-58 229.6 162 66.0
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 3.5e-57 226.9 147 69.4
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 2.3e-56 224.2 204 57.8
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 6.6e-56 222.6 185 58.9
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 2.5e-55 220.7 187 57.2
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.6e-54 218.0 186 54.3
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 4.7e-54 216.5 164 62.8
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 1.0e-53 215.3 162 56.8
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.4e-53 214.9 185 58.4
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 4.0e-53 213.4 145 68.3
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 6.8e-53 212.6 164 64.0
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 9.8e-52 208.8 157 58.0
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 5.0e-48 196.4 185 49.2
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 7.3e-47 192.6 130 68.5
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 2.8e-46 190.7 207 49.3
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 5.2e-45 186.4 166 50.6
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 9.8e-44 182.2 186 47.8
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.7e-41 174.1 106 71.7
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 6.6e-40 169.5 163 49.7
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 4.7e-38 163.3 200 41.5
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.2e-27 127.9 163 45.4
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.0e-24 119.0 81 69.1
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 2.3e-24 117.9 98 59.2
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 8.4e-19 99.4 64 59.4
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.1e-18 99.0 95 43.2
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 5.3e-13 80.1 79 49.4
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 3.2e-10 70.9 92 40.2
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.1e-06 56.2 59 49.2


User provided reference genes

Program Settings