Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1452.1 Capsicum annuum HOM05D008695 ORTHO05D006375 3.7e-105 385.2 238 100.0
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 2.9e-57 226.1 234 52.1
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-57 226.1 234 52.1
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 3.7e-57 225.7 234 52.1
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-56 223.4 234 51.7
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-56 223.4 234 51.7
Sopen06g005030 Solanum pennellii HOM05D008695 ORTHO05D001422 3.2e-56 222.6 234 51.7
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-55 220.7 234 51.3
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 2.7e-55 219.5 234 50.9
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-54 217.2 234 50.9
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.5e-53 213.8 234 50.4
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 4.3e-53 212.2 234 49.6
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 1.1e-48 197.6 222 49.5
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 6.6e-46 188.3 234 56.4
Sopen01g011600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.6e-44 183.7 234 45.3
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-44 182.2 133 66.2
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-43 181.0 188 50.0
Sopen01g018140 Solanum pennellii HOM05D008695 ORTHO05D001422 6.8e-43 178.3 233 44.6
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 2.2e-41 173.3 234 45.7
Sopen09g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-38 164.1 180 48.9
Sopen01g010260 Solanum pennellii HOM05D000047 ORTHO05D000044 2.8e-36 156.4 124 61.3
Sopen01g027720 Solanum pennellii HOM05D008695 ORTHO05D001422 3.8e-33 146.0 233 39.9
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 2.1e-31 140.2 130 56.9
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 8.7e-30 134.8 87 70.1
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-29 134.4 170 45.3
Sopen05g019090 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-28 131.0 130 53.8
Sopen01g011610 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-26 124.4 191 56.5
Sopen07g017450 Solanum pennellii HOM05D008695 ORTHO05D001422 2.6e-26 123.2 171 43.3
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 5.8e-26 122.1 166 44.6
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 7.6e-26 121.7 170 42.9
Sopen12g025930 Solanum pennellii HOM05D008695 ORTHO05D001422 9.3e-24 114.8 172 41.3
Nitab4.5_0008949g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 5.1e-22 109.0 112 51.8
Nitab4.5_0015285g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 6.6e-22 108.6 126 43.7
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-20 103.6 150 37.3
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-19 100.5 147 42.9
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-19 100.1 153 36.6
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-19 99.8 151 37.7
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.9e-19 98.6 153 37.3
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.2e-18 97.8 224 29.5
Nitab4.5_0024891g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.4e-18 96.3 224 29.0
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-18 96.3 149 36.2
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-18 95.5 236 30.9
Nitab4.5_0000109g0590 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.6e-18 95.1 214 30.8
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.6e-18 95.1 224 28.1
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 9.9e-18 94.7 224 29.0
Sopen01g017210 Solanum pennellii HOM05D000047 ORTHO05D001422 1.3e-17 94.4 152 40.1
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-17 92.4 116 42.2
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-17 92.4 119 40.3
Nitab4.5_0003972g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.4e-17 91.7 115 43.5
Nitab4.5_0000235g0100 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.1e-16 91.3 224 29.0
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-16 91.3 151 34.4
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 1.4e-16 90.9 117 41.0
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.9e-16 90.5 130 33.8
Sopen07g017290 Solanum pennellii HOM05D000047 ORTHO05D000589 1.9e-16 90.5 134 43.3
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-16 90.1 117 41.0
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-16 90.1 117 40.2
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-16 89.7 124 38.7
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 3.2e-16 89.7 117 41.0
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-16 89.4 98 44.9
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-16 89.4 115 41.7
Nitab4.5_0000157g0030 Nicotiana tabacum HOM05D008440 ORTHO05D011334 5.4e-16 89.0 224 27.7
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.3e-16 88.2 151 34.4
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-15 87.4 149 34.2
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-15 87.0 143 35.0
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 2.1e-15 87.0 102 42.2
Sopen12g016390 Solanum pennellii HOM05D008695 ORTHO05D001422 4.6e-15 85.9 69 68.1
Nitab4.5_0000926g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-14 84.3 90 46.7
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-14 84.0 139 34.5
Nitab4.5_0000372g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-14 84.0 152 33.6
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-14 83.6 124 37.9
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-14 83.2 116 38.8
Nitab4.5_0005614g0050 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.0e-14 83.2 202 31.7
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-14 82.0 116 41.4
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.7e-14 81.6 143 35.0
Nitab4.5_0000637g0010 Nicotiana tabacum HOM05D008440 ORTHO05D000292 4.3e-13 79.3 170 32.4
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.3e-13 79.3 116 38.8
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 4.3e-13 79.3 133 34.6
Nitab4.5_0000342g0240 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.6e-13 79.0 83 39.8
Sopen09g014930 Solanum pennellii HOM05D008695 ORTHO05D001422 5.6e-13 79.0 69 62.3
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-12 77.0 153 32.7
Nitab4.5_0016905g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-12 77.0 113 37.2
Sopen12g012670 Solanum pennellii HOM05D000047 ORTHO05D000589 4.8e-12 75.9 132 36.4
Nitab4.5_0000235g0090 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.1e-11 73.2 102 34.3
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 4.0e-11 72.8 97 39.2
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 5.3e-11 72.4 137 34.3
Nitab4.5_0002851g0010 Nicotiana tabacum HOM05D008440 ORTHO05D011334 6.9e-11 72.0 99 33.3
Nitab4.5_0001544g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 9.0e-11 71.6 80 43.8
Nitab4.5_0006504g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 1.2e-10 71.2 103 35.9
Nitab4.5_0000308g0170 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-10 70.9 68 48.5
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 1.5e-10 70.9 103 36.9
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-10 70.5 68 45.6
Nitab4.5_0000858g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.5e-10 69.3 159 32.1
Nitab4.5_0005513g0020 Nicotiana tabacum HOM05D008440 ORTHO05D006375 5.8e-10 68.9 77 40.3
Nitab4.5_0004478g0070 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.0e-09 68.2 70 47.1
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-09 67.4 124 33.1
Nitab4.5_0010681g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-09 67.4 100 39.0
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-09 67.0 134 32.8
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.9e-09 66.6 65 46.2
Sopen10g020210 Solanum pennellii HOM05D008695 ORTHO05D001422 2.9e-09 66.6 64 54.7
Nitab4.5_0001239g0190 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.8e-09 66.2 73 39.7
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 6.4e-09 65.5 58 51.7
Nitab4.5_0000359g0150 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.4e-09 65.1 93 37.6
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-08 62.8 122 32.0
Nitab4.5_0007526g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-08 62.8 147 29.9
Nitab4.5_0000421g0090 Nicotiana tabacum HOM05D008440 ORTHO05D006375 5.5e-08 62.4 80 40.0
Nitab4.5_0007657g0090 Nicotiana tabacum HOM05D008440 ORTHO05D006375 7.1e-08 62.0 67 46.3
Nitab4.5_0000032g0170 Nicotiana tabacum HOM05D008440 ORTHO05D001422 9.3e-08 61.6 76 42.1
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-07 60.8 184 27.2
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 1.6e-07 60.8 134 32.1
Sopen10g014800 Solanum pennellii HOM05D007487 ORTHO05D008561 1.6e-07 60.8 133 32.3
Nitab4.5_0001850g0050 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.1e-07 60.5 130 27.7
Sopen04g012750 Solanum pennellii HOM05D007487 ORTHO05D008561 2.1e-07 60.5 134 32.8
Sopen06g009410 Solanum pennellii HOM05D007487 ORTHO05D008561 2.7e-07 60.1 134 32.1
Sopen05g015790 Solanum pennellii HOM05D002047 ORTHO05D001422 3.5e-07 59.7 52 55.8
Nitab4.5_0004122g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.6e-07 59.3 146 26.7
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 6.0e-07 58.9 95 35.8
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 6.0e-07 58.9 34 73.5
Sopen01g005980 Solanum pennellii HOM05D002047 ORTHO05D001422 7.9e-07 58.5 53 56.6
Sopen01g005990 Solanum pennellii HOM05D002047 ORTHO05D001422 7.9e-07 58.5 53 56.6
Sopen03g024880 Solanum pennellii HOM05D007487 ORTHO05D008561 7.9e-07 58.5 134 31.3
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-07 58.5 52 50.0
Sopen01g006870 Solanum pennellii HOM05D002047 ORTHO05D001422 1.0e-06 58.2 53 56.6
Sopen12g014280 Solanum pennellii HOM05D000182 ORTHO05D001422 1.0e-06 58.2 53 54.7
Sopen01g015240 Solanum pennellii HOM05D007487 ORTHO05D008561 1.3e-06 57.8 134 32.1
Sopen01g019640 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-06 57.8 138 29.7
Sopen04g022380 Solanum pennellii HOM05D007487 ORTHO05D008561 1.3e-06 57.8 134 32.1
Sopen05g014630 Solanum pennellii HOM05D007487 ORTHO05D008561 1.3e-06 57.8 138 29.0
Sopen06g007040 Solanum pennellii HOM05D002047 ORTHO05D001422 1.8e-06 57.4 53 54.7
Sopen10g010870 Solanum pennellii HOM05D010031 ORTHO05D012898 1.8e-06 57.4 123 35.8
Nitab4.5_0001955g0140 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.3e-06 57.0 182 25.3
Sopen12g017850 Solanum pennellii HOM05D007487 ORTHO05D008561 2.3e-06 57.0 138 28.3
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 3.0e-06 56.6 95 34.7
Sopen08g018560 Solanum pennellii HOM05D000047 ORTHO05D000044 3.0e-06 56.6 58 50.0
Nitab4.5_0000902g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-06 56.2 93 34.4
Sopen07g015780 Solanum pennellii HOM05D007487 ORTHO05D008561 3.9e-06 56.2 134 31.3
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.1e-06 55.8 136 30.1
Nitab4.5_0009292g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.1e-06 55.8 64 40.6
Sopen05g012170 Solanum pennellii HOM05D002047 ORTHO05D001422 5.1e-06 55.8 53 52.8
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 5.1e-06 55.8 95 34.7
Nitab4.5_0001663g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.7e-06 55.5 79 34.2
Sopen01g015110 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-06 55.5 134 31.3
Sopen03g019350 Solanum pennellii HOM05D002047 ORTHO05D001422 6.7e-06 55.5 95 33.7
Sopen08g013060 Solanum pennellii HOM05D002047 ORTHO05D001422 6.7e-06 55.5 95 33.7
PGSC0003DMG400032786 Solanum tuberosum HOM05D002047 ORTHO05D001422 6.7e-06 55.5 95 34.7
Nitab4.5_0003684g0020 Nicotiana tabacum HOM05D008695 ORTHO05D001422 8.7e-06 55.1 44 54.5
Sopen08g008690 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-06 55.1 95 34.7


User provided reference genes

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