Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 2.4e-93 345.5 178 100.0
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 4.9e-86 321.2 178 92.1
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.6e-84 316.2 178 91.6
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 2.7e-84 315.5 178 91.0
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 1.3e-83 313.2 178 89.9
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 6.0e-76 287.7 162 90.1
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.3e-70 270.0 185 80.5
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 2.8e-65 252.3 182 74.2
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 4.7e-65 251.5 182 73.6
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 1.3e-62 243.4 157 78.3
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 1.7e-62 243.0 158 78.5
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 8.4e-62 240.7 155 79.4
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 2.4e-61 239.2 178 75.3
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 4.2e-61 238.4 177 72.9
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 9.3e-61 237.3 158 75.9
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 2.1e-60 236.1 159 74.8
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 3.5e-60 235.3 152 79.6
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 4.6e-60 235.0 158 76.6
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 6.0e-60 234.6 174 70.7
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 5.1e-59 231.5 158 74.7
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 1.5e-58 229.9 169 71.6
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 1.9e-58 229.6 152 77.6
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 2.5e-58 229.2 158 74.7
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 2.5e-58 229.2 158 74.1
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 2.5e-58 229.2 141 83.0
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 4.3e-58 228.4 161 72.0
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 5.6e-58 228.0 177 67.8
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 5.6e-58 228.0 151 77.5
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 9.6e-58 227.3 150 76.7
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 9.6e-58 227.3 166 69.9
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 1.3e-57 226.9 158 74.7
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 1.6e-57 226.5 141 81.6
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 2.1e-57 226.1 141 80.1
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 2.1e-57 226.1 166 69.9
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 2.8e-57 225.7 170 70.0
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 2.8e-57 225.7 141 80.9
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 2.8e-57 225.7 141 80.9
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 2.8e-57 225.7 148 83.1
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 4.8e-57 224.9 163 71.8
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 8.1e-57 224.2 158 74.1
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 1.4e-56 223.4 139 81.3
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 1.4e-56 223.4 139 81.3
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 2.4e-56 222.6 141 79.4
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 3.1e-56 222.2 158 71.5
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 3.1e-56 222.2 158 72.8
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 4.0e-56 221.9 158 73.4
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 5.3e-56 221.5 156 73.7
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 6.9e-56 221.1 158 69.6
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 1.2e-55 220.3 162 71.0
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 1.5e-55 219.9 159 69.8
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 2.6e-55 219.2 177 65.0
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 3.4e-55 218.8 158 70.9
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 3.4e-55 218.8 156 72.4
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 5.8e-55 218.0 148 73.0
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 7.6e-55 217.6 158 72.2
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.3e-54 216.9 152 71.7
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 2.2e-54 216.1 156 69.2
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 2.9e-54 215.7 147 74.1
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 2.9e-54 215.7 141 75.9
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 3.8e-54 215.3 146 73.3
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 3.8e-54 215.3 146 74.0
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 4.9e-54 214.9 158 70.9
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 1.4e-53 213.4 153 71.2
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 1.4e-53 213.4 137 80.3
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 1.4e-53 213.4 151 72.2
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 7.1e-53 211.1 156 67.9
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 1.6e-52 209.9 146 75.3
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 2.1e-52 209.5 153 69.9
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 2.7e-52 209.1 145 75.9
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 2.7e-52 209.1 129 82.2
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 3.5e-52 208.8 170 66.5
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 3.9e-51 205.3 154 68.8
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 3.9e-51 205.3 155 69.7
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 5.1e-51 204.9 123 80.5
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 6.7e-51 204.5 153 68.0
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 1.1e-50 203.8 140 72.9
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 2.5e-50 202.6 141 73.0
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 2.5e-50 202.6 141 73.0
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 3.3e-50 202.2 168 64.9
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 4.3e-50 201.8 138 73.2
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 9.6e-50 200.7 141 71.6
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 2.1e-49 199.5 141 70.9
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 3.7e-49 198.7 137 73.0
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 4.8e-49 198.4 146 71.2
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 1.4e-48 196.8 148 68.9
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 2.4e-48 196.1 137 73.7
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 3.1e-48 195.7 137 74.5
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 3.1e-48 195.7 137 73.7
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 5.3e-48 194.9 123 76.4
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 2.0e-47 193.0 140 72.9
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 3.4e-47 192.2 135 74.1
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 7.6e-47 191.0 136 68.4
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 9.9e-47 190.7 142 71.1
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 9.9e-47 190.7 142 71.1
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 1.3e-46 190.3 140 72.1
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 1.3e-46 190.3 140 72.1
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.3e-46 190.3 150 64.7
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 2.2e-46 189.5 135 73.3
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 3.8e-46 188.7 142 69.7
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 3.8e-46 188.7 142 69.7
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 4.9e-46 188.3 132 75.0
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 8.4e-46 187.6 142 69.7
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 8.4e-46 187.6 141 69.5
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 2.4e-45 186.0 151 62.9
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 4.6e-44 181.8 173 57.8
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 1.9e-42 176.4 126 74.6
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 5.6e-42 174.9 130 66.9
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 7.4e-42 174.5 105 82.9
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 1.3e-41 173.7 126 73.8
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 2.8e-41 172.6 112 78.6
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 1.1e-40 170.6 105 81.9
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 3.1e-40 169.1 120 66.7
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 9.0e-40 167.5 101 80.2
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 2.6e-39 166.0 99 83.8
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 4.2e-37 158.7 110 72.7
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 3.0e-35 152.5 118 63.6
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 3.9e-35 152.1 126 64.3
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 5.1e-35 151.8 101 79.2
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 5.7e-34 148.3 123 54.5
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 3.7e-33 145.6 99 74.7
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.8e-32 143.3 144 53.5
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 1.7e-30 136.7 110 64.5
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 1.3e-27 127.1 83 74.7
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 2.5e-26 122.9 77 79.2
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 2.0e-23 113.2 74 78.4
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 1.6e-20 103.6 129 43.4
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 2.3e-19 99.8 118 50.8
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 5.1e-19 98.6 129 45.0
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 6.3e-17 91.7 125 41.6
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 2.4e-16 89.7 95 52.6
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 9.1e-16 87.8 146 44.5
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 4.5e-15 85.5 74 58.1
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 5.9e-15 85.1 51 76.5
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 4.4e-10 68.9 47 68.1
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 1.2e-07 60.8 48 62.5
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 1.2e-07 60.8 48 62.5
Prupe.5G038700 Prunus persica HOM05D005569 ORTHO05D007052 6.5e-06 55.1 39 66.7


User provided reference genes

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