Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1445.15 Capsicum annuum HOM05D002953 ORTHO05D003249 1.0e-143 513.5 279 100.0
Sopen04g001490 Solanum pennellii HOM05D002953 ORTHO05D003249 1.5e-73 280.4 236 70.8
Nitab4.5_0000014g0320 Nicotiana tabacum HOM05D002953 ORTHO05D003249 1.3e-69 267.3 241 66.4
Solyc04g005470.3 Solanum lycopersicum HOM05D002953 ORTHO05D003249 5.5e-68 261.9 263 63.5
Peaxi162Scf00187g01311 Petunia axillaris HOM05D002953 ORTHO05D003249 2.8e-64 249.6 262 59.2
Nitab4.5_0002806g0030 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.1e-63 247.7 247 61.5
Sopen05g007380 Solanum pennellii HOM05D002953 ORTHO05D003249 7.3e-36 155.2 324 36.7
Peaxi162Scf00314g00019 Petunia axillaris HOM05D002953 ORTHO05D003249 1.2e-35 154.5 273 40.7
Nitab4.5_0000334g0300 Nicotiana tabacum HOM05D000954 ORTHO05D000822 1.3e-29 134.4 280 38.2
Oeu016226.1 Olea europaea HOM05D002953 ORTHO05D003249 4.6e-22 109.4 275 34.2
Nitab4.5_0004304g0070 Nicotiana tabacum HOM05D000954 ORTHO05D000822 6.6e-21 105.5 241 36.5
Atru.chr11.1683 Acer truncatum HOM05D002953 ORTHO05D003249 7.3e-20 102.1 287 30.7
Actinidia19918 Actinidia chinensis HOM05D002953 ORTHO05D003249 4.7e-19 99.4 237 33.8
MD13G1065400 Malus domestica HOM05D002953 ORTHO05D003249 4.7e-19 99.4 240 35.4
CAN.G1340.5 Capsicum annuum HOM05D002953 ORTHO05D003249 3.1e-18 96.7 250 32.8
TAR622G0728 Trochodendron aralioides HOM05D002953 ORTHO05D003249 2.2e-16 90.5 235 31.1
Solyc05g012550.4 Solanum lycopersicum HOM05D002953 ORTHO05D003249 2.9e-16 90.1 107 49.5
TAR371G0440 Trochodendron aralioides HOM05D002953 ORTHO05D003249 2.9e-16 90.1 234 32.1
FAN07G2390 Fragaria x ananassa HOM05D000954 ORTHO05D000822 6.4e-16 89.0 264 32.2
TAR629G0224 Trochodendron aralioides HOM05D002953 ORTHO05D003249 6.4e-16 89.0 227 31.7
CSS0004001 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 4.1e-15 86.3 144 38.2
Lj6C782G17 Lonicera japonica HOM05D002953 ORTHO05D003249 1.2e-14 84.7 259 31.7
Ciclev10033969m.g Citrus clementina HOM05D002953 ORTHO05D003249 3.5e-14 83.2 110 45.5
Rhsim12G0076400 Rhododendron simsii HOM05D002953 ORTHO05D003249 4.6e-14 82.8 298 26.5
QL03p071046 Quercus lobata HOM05D002953 ORTHO05D003249 6.0e-14 82.4 261 28.0
CiPaw.05G127400 Carya illinoinensis HOM05D002953 ORTHO05D003249 7.8e-14 82.0 270 31.1
FAN22G1160 Fragaria x ananassa HOM05D000954 ORTHO05D003249 1.3e-13 81.3 262 31.3
FvH4_4g30432 Fragaria vesca HOM05D002953 ORTHO05D003249 2.3e-13 80.5 256 29.7
PGR102G2110 Punica granatum HOM05D002953 ORTHO05D003249 6.6e-13 79.0 88 50.0
Lalb_Chr17g0341061 Lupinus albus HOM05D002953 ORTHO05D003249 1.9e-12 77.4 263 33.1
TWI75G0656 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 2.5e-12 77.0 253 31.2
Potri.015G049700 Populus trichocarpa HOM05D002953 ORTHO05D003249 4.3e-12 76.3 231 32.9
Lsat_1_v5_gn_4_12001 Lactuca sativa HOM05D002953 ORTHO05D003249 5.6e-12 75.9 230 30.9
Nn4g23349 Nelumbo nucifera HOM05D002953 ORTHO05D003249 5.6e-12 75.9 256 28.5
GSVIVG01007915001 Vitis vinifera HOM05D002953 ORTHO05D003249 9.5e-12 75.1 227 29.1
DCAR_030027 Daucus carota HOM05D002953 ORTHO05D003249 1.2e-11 74.7 232 30.2
HanXRQChr02g0035641 Helianthus annuus HOM05D002953 ORTHO05D003249 1.6e-11 74.3 89 43.8
Lsat_1_v5_gn_3_56140 Lactuca sativa HOM05D002953 ORTHO05D003249 2.1e-11 73.9 185 31.4
ClCG04G011980 Citrullus lanatus HOM05D002953 ORTHO05D003249 2.8e-11 73.6 227 28.2
COL.COLO4_27923 Corchorus olitorius HOM05D002953 ORTHO05D003249 3.6e-11 73.2 314 27.4
Eucgr.B03177 Eucalyptus grandis HOM05D002953 ORTHO05D003249 3.6e-11 73.2 267 29.2
CDE10G0450 Ceratophyllum demersum HOM05D002953 ORTHO05D003249 4.7e-11 72.8 239 29.7
CsaV3_1G005800 Cucumis sativus L. HOM05D002953 ORTHO05D003249 8.1e-11 72.0 228 28.1
MELO3C002011.2 Cucumis melo HOM05D002953 ORTHO05D003249 1.4e-10 71.2 226 29.2
ECA246G1271 Erigeron canadensis HOM05D000773 ORTHO05D000588 1.4e-10 71.2 143 35.7
Aqoxy3G00465 Aquilegia oxysepala HOM05D002953 ORTHO05D003249 2.4e-10 70.5 224 30.4
Potri.010G160900 Populus trichocarpa HOM05D002953 ORTHO05D003249 2.4e-10 70.5 254 29.1
Rhsim12G0152800 Rhododendron simsii HOM05D002953 ORTHO05D003249 2.4e-10 70.5 235 25.5
Sabra10G0122400 Salix brachista HOM05D002953 ORTHO05D003249 2.4e-10 70.5 234 28.6
Atru.chr9.285 Acer truncatum HOM05D002953 ORTHO05D003249 4.0e-10 69.7 230 28.3
Manes.14G083400 Manihot esculenta HOM05D002953 ORTHO05D003249 4.0e-10 69.7 217 26.7
DCAR_026019 Daucus carota HOM05D002953 ORTHO05D003249 5.2e-10 69.3 240 26.7
MD16G1063900 Malus domestica HOM05D002953 ORTHO05D003249 5.2e-10 69.3 269 28.3
Ah.03g139130 Amaranthus hybridus HOM05D002953 ORTHO05D003249 6.8e-10 68.9 87 43.7
Glyma.20G027100 Glycine max HOM05D002953 ORTHO05D003249 6.8e-10 68.9 97 42.3
CANSAT64G0943 Cannabis sativa HOM05D002953 ORTHO05D003249 8.9e-10 68.6 273 28.2
Gohir.D02G128400 Gossypium hirsutum HOM05D002953 ORTHO05D003249 8.9e-10 68.6 95 42.1
Gorai.005G144100 Gossypium raimondii HOM05D002953 ORTHO05D003249 8.9e-10 68.6 95 42.1
CANSAT80G2766 Cannabis sativa HOM05D002953 ORTHO05D003249 1.2e-09 68.2 227 29.5
FAN12G1055 Fragaria x ananassa HOM05D002953 ORTHO05D003249 1.2e-09 68.2 267 28.1
Gohir.A03G103200 Gossypium hirsutum HOM05D002953 ORTHO05D003249 1.2e-09 68.2 95 42.1
Sed0013431 Sechium edule HOM05D002953 ORTHO05D003249 1.5e-09 67.8 232 29.7
BolC8t49262H Brassica oleracea HOM05D002953 ORTHO05D003249 2.6e-09 67.0 89 47.2
Rhsim12G0152900 Rhododendron simsii HOM05D002953 ORTHO05D003249 2.6e-09 67.0 235 25.1
VMungo0251G2769 Vigna mungo HOM05D002953 ORTHO05D003249 2.6e-09 67.0 98 41.8
Ciclev10024374m.g Citrus clementina HOM05D002953 ORTHO05D003249 3.4e-09 66.6 234 32.5
Prupe.5G200200 Prunus persica HOM05D002953 ORTHO05D003249 3.4e-09 66.6 229 30.1
Sed0010847 Sechium edule HOM05D002953 ORTHO05D003249 3.4e-09 66.6 222 28.8
MD06G1199500 Malus domestica HOM05D002953 ORTHO05D003249 4.4e-09 66.2 237 28.3
SalBow2G1905 Salvia bowleyana HOM05D002953 ORTHO05D003249 4.4e-09 66.2 254 28.3
SalBow2G2783 Salvia bowleyana HOM05D002953 ORTHO05D003249 4.4e-09 66.2 254 28.3
HPP92_013438 Vanilla planifolia HOM05D002953 ORTHO05D003249 5.8e-09 65.9 233 29.2
Zm00001eb008420 Zea mays HOM05D002953 ORTHO05D003249 5.8e-09 65.9 102 38.2
Actinidia19011 Actinidia chinensis HOM05D002953 ORTHO05D003249 7.6e-09 65.5 225 29.3
Nn3g17381 Nelumbo nucifera HOM05D002953 ORTHO05D003249 9.9e-09 65.1 253 26.5
DCAR_007182 Daucus carota HOM05D002953 ORTHO05D003249 1.3e-08 64.7 214 30.8
Glyma.02G114300 Glycine max HOM05D002953 ORTHO05D003249 1.3e-08 64.7 229 33.2
Potri.008G093300 Populus trichocarpa HOM05D002953 ORTHO05D003249 1.3e-08 64.7 279 27.6
ECA232G4309 Erigeron canadensis HOM05D002953 ORTHO05D003249 2.2e-08 63.9 129 34.9
CARHR014290 Cardamine hirsuta HOM05D002953 ORTHO05D003249 2.9e-08 63.5 269 26.4
Thhalv10009533m.g Eutrema salsugineum HOM05D002953 ORTHO05D003249 2.9e-08 63.5 88 46.6
PGR083G0095 Punica granatum HOM05D002953 ORTHO05D003249 2.9e-08 63.5 229 28.4
QL10p018596 Quercus lobata HOM05D002953 ORTHO05D003249 2.9e-08 63.5 228 30.3
Duzib068G0795 Durio zibethinus HOM05D002953 ORTHO05D003249 4.9e-08 62.8 89 36.0
Gohir.D12G183000 Gossypium hirsutum HOM05D002953 ORTHO05D003249 4.9e-08 62.8 221 28.5
RcHm_v2.0_Chr7g0182351 Rosa chinensis HOM05D002953 ORTHO05D003249 6.4e-08 62.4 228 28.1
A08p32200 Brassica napus HOM05D002953 ORTHO05D003249 8.4e-08 62.0 270 29.3
C08p16380 Brassica napus HOM05D002953 ORTHO05D003249 8.4e-08 62.0 271 29.5
BraA08t35143Z Brassica rapa HOM05D002953 ORTHO05D003249 8.4e-08 62.0 270 29.3
Thecc.02G335300 Theobroma cacao HOM05D002953 ORTHO05D003249 8.4e-08 62.0 86 43.0
Glyma.01G056000 Glycine max HOM05D002953 ORTHO05D003249 1.1e-07 61.6 229 31.0
Gorai.008G196300 Gossypium raimondii HOM05D002953 ORTHO05D003249 1.1e-07 61.6 221 28.1
TPR.G34076 Trifolium pratense HOM05D002953 ORTHO05D003249 1.1e-07 61.6 94 41.5
unitig_8.g3188 Utricularia gibba HOM05D002953 ORTHO05D003249 1.1e-07 61.6 278 28.1
BcaC07g38708 Brassica carinata HOM05D002953 ORTHO05D003249 1.4e-07 61.2 271 29.5
ECA234G3661 Erigeron canadensis HOM05D002953 ORTHO05D003249 1.4e-07 61.2 232 28.9
Dinv16709 Davidia involucrata HOM05D002953 ORTHO05D003249 1.9e-07 60.8 174 34.5
Psat7g135400 Pisum sativum HOM05D002953 ORTHO05D003249 1.9e-07 60.8 95 37.9
Migut.L01214 Erythranthe guttata HOM05D002953 ORTHO05D003249 2.4e-07 60.5 253 30.4
Cpa.g.sc1.99 Carica papaya HOM05D002953 ORTHO05D003249 3.2e-07 60.1 258 26.4
FAN08G1545 Fragaria x ananassa HOM05D002953 ORTHO05D000365 3.2e-07 60.1 236 28.4
Glyma.07G226700 Glycine max HOM05D002953 ORTHO05D003249 3.2e-07 60.1 270 28.9
TPR.G24432 Trifolium pratense HOM05D002953 ORTHO05D003249 3.2e-07 60.1 253 30.0
Medtr5g043690 Medicago truncatula HOM05D002953 ORTHO05D003249 5.4e-07 59.3 265 27.5
Prupe.1G282700 Prunus persica HOM05D002953 ORTHO05D003249 5.4e-07 59.3 212 27.8
Sabra08G0070100 Salix brachista HOM05D002953 ORTHO05D003249 7.1e-07 58.9 281 26.7
Migut.E00059 Erythranthe guttata HOM05D002953 ORTHO05D003249 9.2e-07 58.5 296 26.7
CARHR062210 Cardamine hirsuta HOM05D002953 ORTHO05D003249 1.2e-06 58.2 84 42.9
Cc11_g12310 Coffea canephora HOM05D002953 ORTHO05D003249 1.2e-06 58.2 206 27.7
Gohir.A12G180300 Gossypium hirsutum HOM05D002953 ORTHO05D003249 1.2e-06 58.2 221 27.6
Lj4g0014446 Lotus japonicus HOM05D002953 ORTHO05D003249 1.2e-06 58.2 107 36.4
BcaC05g25290 Brassica carinata HOM05D002953 ORTHO05D003249 1.6e-06 57.8 242 27.7
AUR62007948 Chenopodium quinoa HOM05D002953 ORTHO05D003249 1.6e-06 57.8 319 26.3
Eucgr.B00564 Eucalyptus grandis HOM05D002953 ORTHO05D003249 1.6e-06 57.8 230 26.5
CDE10G0453 Ceratophyllum demersum HOM05D002953 ORTHO05D003249 2.1e-06 57.4 271 25.5
Hma1.2p1_0357F.1_g134470 Hydrangea macrophylla HOM05D002953 ORTHO05D003249 2.1e-06 57.4 180 30.6
Sp1g12040 Schrenkiella parvula HOM05D002953 ORTHO05D003249 2.1e-06 57.4 276 26.8
SGA_v2.0_scaffold16G07764 Striga asiatica HOM05D002953 ORTHO05D003249 2.1e-06 57.4 106 39.6
Zm00001eb233330 Zea mays HOM05D002953 ORTHO05D003249 2.1e-06 57.4 169 29.0
Gohir.D07G074100 Gossypium hirsutum HOM05D002953 ORTHO05D003249 2.7e-06 57.0 230 28.3
Sabra15G0078200 Salix brachista HOM05D002953 ORTHO05D003249 2.7e-06 57.0 227 26.0
THA.LOC104807117 Tarenaya hassleriana HOM05D002953 ORTHO05D003249 2.7e-06 57.0 89 41.6
Duzib205G1659 Durio zibethinus HOM05D002953 ORTHO05D003249 3.5e-06 56.6 229 29.7
Thecc.03G096500 Theobroma cacao HOM05D002953 ORTHO05D003249 3.5e-06 56.6 217 24.9
AUR62003129 Chenopodium quinoa HOM05D002953 ORTHO05D003249 4.6e-06 56.2 319 25.7
Cc00_g02220 Coffea canephora HOM05D002953 ORTHO05D003249 4.6e-06 56.2 223 27.8
FvH4_5g14350 Fragaria vesca HOM05D002953 ORTHO05D003249 4.6e-06 56.2 238 27.3
Haze_11930 Corylus avellana HOM05D002953 ORTHO05D003249 7.8e-06 55.5 245 27.8
Gorai.001G078300 Gossypium raimondii HOM05D002953 ORTHO05D003249 7.8e-06 55.5 230 27.8
HanXRQChr12g0375351 Helianthus annuus HOM05D002953 ORTHO05D003249 7.8e-06 55.5 261 29.1


User provided reference genes

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