Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 2.3e-27 124.8 62 100.0
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 4.6e-23 110.5 62 90.3
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 1.6e-20 102.1 59 84.7
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 7.5e-18 93.2 55 81.8
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 1.7e-17 92.0 55 81.8
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 1.7e-17 92.0 55 81.8
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 1.7e-17 92.0 55 81.8
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 1.7e-17 92.0 55 81.8
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 2.2e-17 91.7 55 81.8
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 6.4e-17 90.1 55 80.0
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 6.4e-17 90.1 55 80.0
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 1.1e-16 89.4 55 80.0
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 1.1e-16 89.4 55 80.0
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 1.4e-16 89.0 55 80.0
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 1.9e-16 88.6 56 80.4
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 3.2e-16 87.8 59 76.3
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 3.2e-16 87.8 59 69.5
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 5.4e-16 87.0 55 78.2
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 1.2e-15 85.9 55 76.4
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 1.2e-15 85.9 55 76.4
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.0e-15 85.1 59 69.5
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 2.7e-15 84.7 55 74.5
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 2.7e-15 84.7 59 71.2
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 2.7e-15 84.7 61 70.5
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 3.5e-15 84.3 56 73.2
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 4.6e-15 84.0 62 69.4
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 4.6e-15 84.0 54 74.1
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 7.8e-15 83.2 59 72.9
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 7.8e-15 83.2 59 69.5
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 7.8e-15 83.2 54 74.1
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 1.0e-14 82.8 57 71.9
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 3.9e-14 80.9 54 70.4
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 6.6e-14 80.1 61 67.2
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 6.6e-14 80.1 54 74.1
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 6.6e-14 80.1 54 70.4
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 8.6e-14 79.7 51 76.5
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.1e-13 79.3 51 72.5
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.1e-13 79.3 51 72.5
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 1.1e-13 79.3 59 69.5
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 1.5e-13 79.0 51 74.5
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 1.5e-13 79.0 49 81.6
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.9e-13 78.6 59 67.8
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 1.9e-13 78.6 48 79.2
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 2.5e-13 78.2 51 74.5
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 2.5e-13 78.2 59 64.4
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 3.3e-13 77.8 59 67.8
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 3.3e-13 77.8 41 92.7
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 3.3e-13 77.8 61 68.9
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 4.3e-13 77.4 48 77.1
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 4.3e-13 77.4 58 67.2
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 4.3e-13 77.4 58 67.2
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 4.3e-13 77.4 60 66.7
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 5.6e-13 77.0 45 80.0
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 9.5e-13 76.3 59 64.4
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 9.5e-13 76.3 53 71.7
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.2e-12 75.9 59 66.1
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 1.2e-12 75.9 59 62.7
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 1.2e-12 75.9 57 68.4
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.6e-12 75.5 59 62.7
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.6e-12 75.5 59 64.4
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 2.1e-12 75.1 48 72.9
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 2.1e-12 75.1 48 72.9
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 3.6e-12 74.3 61 65.6
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 3.6e-12 74.3 56 67.9
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 4.7e-12 73.9 59 62.7
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 8.1e-12 73.2 55 69.1
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 8.1e-12 73.2 55 65.5
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 1.1e-11 72.8 59 59.3
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 2.3e-11 71.6 48 70.8
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 2.3e-11 71.6 55 60.0
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 3.1e-11 71.2 59 62.7
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 4.0e-11 70.9 48 68.8
CiPaw.14G095500 Carya illinoinensis HOM05D007758 ORTHO05D009788 4.0e-11 70.9 59 59.3
CiPaw.02G038300 Carya illinoinensis HOM05D007758 ORTHO05D009788 5.2e-11 70.5 59 59.3
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 5.2e-11 70.5 45 75.6
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 5.2e-11 70.5 51 70.6
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 5.2e-11 70.5 54 64.8
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 6.8e-11 70.1 59 59.3
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 1.2e-10 69.3 48 70.8
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 2.0e-10 68.6 41 78.0
unitig_744.g24437 Utricularia gibba HOM05D007758 ORTHO05D009788 2.0e-10 68.6 89 46.1
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 3.4e-10 67.8 37 86.5
CiPaw.14G095700 Carya illinoinensis HOM05D007758 ORTHO05D009788 5.8e-10 67.0 59 55.9
Potri.003G085400 Populus trichocarpa HOM05D007758 ORTHO05D009788 4.9e-09 63.9 76 48.7
RcHm_v2.0_Chr7g0205921 Rosa chinensis HOM05D007758 ORTHO05D009788 1.4e-08 62.4 61 55.7
SGA_v2.0_scaffold7G03834 Striga asiatica HOM05D007758 ORTHO05D009788 1.0e-06 56.2 39 74.4


User provided reference genes

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