Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1440.18 Capsicum annuum HOM05D000011 ORTHO05D001721 9.4e-98 360.1 177 100.0
CAN.G1440.4 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-70 270.0 211 64.9
CAN.G3968.1 Capsicum annuum HOM05D000011 ORTHO05D001721 4.9e-70 268.1 211 64.5
CAN.G895.19 Capsicum annuum HOM05D000011 ORTHO05D001721 4.9e-70 268.1 212 64.6
CAN.G1449.19 Capsicum annuum HOM05D000011 ORTHO05D001721 4.6e-68 261.5 211 63.5
CAN.G741.39 Capsicum annuum HOM05D000011 ORTHO05D001721 3.9e-67 258.5 212 62.7
CAN.G1926.1 Capsicum annuum HOM05D000011 ORTHO05D001721 5.6e-66 254.6 212 63.7
CAN.G1574.9 Capsicum annuum HOM05D000011 ORTHO05D001721 2.6e-63 245.7 206 62.1
CAN.G895.23 Capsicum annuum HOM05D000011 ORTHO05D001721 4.4e-63 245.0 206 62.1
CAN.G1449.12 Capsicum annuum HOM05D000011 ORTHO05D001721 5.8e-63 244.6 213 59.6
CAN.G1768.11 Capsicum annuum HOM05D000011 ORTHO05D001721 2.2e-62 242.7 193 63.2
CAN.G2179.2 Capsicum annuum HOM05D000011 ORTHO05D001721 2.9e-62 242.3 206 61.2
CAN.G1443.18 Capsicum annuum HOM05D000011 ORTHO05D001721 4.9e-62 241.5 210 59.5
CAN.G741.32 Capsicum annuum HOM05D000011 ORTHO05D001721 8.3e-62 240.7 204 62.7
CAN.G1646.18 Capsicum annuum HOM05D000011 ORTHO05D001721 7.8e-60 234.2 211 59.7
CAN.G941.25 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-59 233.4 208 58.2
CAN.G1449.13 Capsicum annuum HOM05D000011 ORTHO05D001721 8.6e-59 230.7 165 71.5
CAN.G1646.15 Capsicum annuum HOM05D000011 ORTHO05D001721 2.5e-58 229.2 201 58.2
CAN.G1443.5 Capsicum annuum HOM05D000011 ORTHO05D001721 3.3e-58 228.8 196 59.2
CAN.G1443.14 Capsicum annuum HOM05D000011 ORTHO05D001721 7.3e-58 227.6 236 52.5
PGSC0003DMG400020737 Solanum tuberosum HOM05D000011 ORTHO05D001721 3.6e-57 225.3 215 56.7
CAN.G741.16 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-56 223.0 235 53.2
CAN.G869.13 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-56 223.0 201 57.2
CAN.G1343.12 Capsicum annuum HOM05D000011 ORTHO05D001721 5.2e-56 221.5 213 54.9
CAN.G1449.18 Capsicum annuum HOM05D000011 ORTHO05D001721 5.2e-56 221.5 130 78.5
CAN.G1287.6 Capsicum annuum HOM05D000011 ORTHO05D001721 9.9e-55 217.2 211 55.0
PGSC0003DMG400020740 Solanum tuberosum HOM05D000011 ORTHO05D001721 1.3e-54 216.9 204 58.3
CAN.G1440.13 Capsicum annuum HOM05D000011 ORTHO05D001721 1.7e-54 216.5 236 51.7
PGSC0003DMG400002217 Solanum tuberosum HOM05D000011 ORTHO05D001721 8.3e-54 214.2 212 54.7
CAN.G241.8 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-53 213.8 211 54.0
CAN.G538.12 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-53 213.8 211 53.1
PGSC0003DMG400021986 Solanum tuberosum HOM05D000011 ORTHO05D001721 4.1e-53 211.8 212 56.6
PGSC0003DMG400025512 Solanum tuberosum HOM05D000011 ORTHO05D001721 1.6e-52 209.9 194 59.8
Sopen05g026210 Solanum pennellii HOM05D000002 ORTHO05D002065 3.5e-52 208.8 218 53.7
Nitab4.5_0010841g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 6.0e-52 208.0 209 52.2
CAN.G1443.17 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-51 206.8 171 61.4
Nitab4.5_0003288g0060 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.3e-51 206.1 210 51.9
CAN.G1287.5 Capsicum annuum HOM05D000011 ORTHO05D001721 3.9e-51 205.3 157 65.0
CAN.G941.22 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-50 203.8 203 54.7
Nitab4.5_0010653g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.1e-49 199.5 210 51.9
CAN.G1440.11 Capsicum annuum HOM05D000011 ORTHO05D001721 2.8e-49 199.1 141 67.4
Nitab4.5_0007518g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.8e-49 199.1 206 52.4
PGSC0003DMG400010895 Solanum tuberosum HOM05D000011 ORTHO05D001721 3.6e-49 198.7 212 53.3
CAN.G741.37 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-48 197.2 216 50.9
Nitab4.5_0002727g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.0e-48 195.3 195 55.4
CAN.G1443.4 Capsicum annuum HOM05D000011 ORTHO05D001721 5.8e-47 191.4 210 52.9
Nitab4.5_0005485g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.3e-45 184.1 195 51.8
CAN.G1440.2 Capsicum annuum HOM05D000011 ORTHO05D001721 1.2e-44 183.7 211 50.2
PGSC0003DMG400020732 Solanum tuberosum HOM05D000011 ORTHO05D001721 3.5e-44 182.2 201 52.2
Nitab4.5_0002977g0140 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.6e-44 181.8 195 50.8
CAN.G741.7 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-43 180.3 166 59.0
Sopen06g003570 Solanum pennellii HOM05D000011 ORTHO05D001721 1.3e-43 180.3 209 50.2
CAN.G1287.1 Capsicum annuum HOM05D000011 ORTHO05D001721 3.0e-43 179.1 245 46.1
Solyc06g008785.1 Solanum lycopersicum HOM05D000011 ORTHO05D001721 5.1e-43 178.3 209 49.3
Sopen06g003240 Solanum pennellii HOM05D000011 ORTHO05D001721 8.7e-43 177.6 209 49.3
Solyc06g008765.1 Solanum lycopersicum HOM05D000011 ORTHO05D001721 3.3e-42 175.6 208 49.0
Nitab4.5_0003180g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.1e-40 170.6 195 47.7
CAN.G538.11 Capsicum annuum HOM05D000011 ORTHO05D001721 1.4e-40 170.2 126 63.5
Nitab4.5_0005135g0060 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.4e-40 169.5 210 45.7
Nitab4.5_0001735g0160 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.1e-40 169.1 210 45.7
Sopen06g003230 Solanum pennellii HOM05D000011 ORTHO05D001721 4.0e-40 168.7 192 51.6
CAN.G1440.16 Capsicum annuum HOM05D000011 ORTHO05D001721 5.3e-40 168.3 107 72.9
Nitab4.5_0002977g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 5.3e-40 168.3 195 47.2
Nitab4.5_0002616g0130 Nicotiana tabacum HOM05D000011 ORTHO05D001721 6.9e-40 167.9 135 61.5
CAN.G1926.12 Capsicum annuum HOM05D000011 ORTHO05D001721 3.4e-39 165.6 106 70.8
CAN.G241.15 Capsicum annuum HOM05D000011 ORTHO05D001721 1.4e-37 160.2 106 69.8
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 7.1e-37 157.9 196 45.4
Nitab4.5_0004406g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.0e-35 154.1 210 42.9
Nitab4.5_0000777g0120 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.6e-34 147.5 209 41.6
Nitab4.5_0007572g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.3e-33 147.1 198 42.4
CAN.G449.2 Capsicum annuum HOM05D000011 ORTHO05D001721 2.1e-33 146.4 194 43.8
CAN.G305.66 Capsicum annuum HOM05D000011 ORTHO05D013051 3.6e-33 145.6 210 41.9
CAN.G1744.9 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-32 143.3 196 42.3
Nitab4.5_0004406g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.0e-32 142.1 199 42.2
Nitab4.5_0002727g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.3e-32 141.7 89 70.8
Nitab4.5_0005135g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.5e-31 140.2 134 54.5
CAN.G1696.2 Capsicum annuum HOM05D000011 ORTHO05D001721 2.0e-31 139.8 200 43.0
Nitab4.5_0000777g0180 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.0e-31 139.8 194 43.8
CAN.G1440.21 Capsicum annuum HOM05D000011 ORTHO05D013051 9.9e-31 137.5 81 76.5
PGSC0003DMG400031878 Solanum tuberosum HOM05D000011 ORTHO05D001721 1.3e-30 137.1 96 65.6
Peaxi162Scf00152g00826 Petunia axillaris HOM05D000011 ORTHO05D001721 1.4e-29 133.7 204 42.6
Peaxi162Scf00034g01612 Petunia axillaris HOM05D000011 ORTHO05D001721 5.4e-29 131.7 185 43.8
CAN.G1744.8 Capsicum annuum HOM05D000011 ORTHO05D013051 7.1e-29 131.3 221 40.7
Nitab4.5_0003671g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 7.1e-29 131.3 210 37.6
Nitab4.5_0009187g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 7.1e-29 131.3 194 39.7
CAN.G186.40 Capsicum annuum HOM05D000011 ORTHO05D001721 2.1e-28 129.8 196 40.3
Nitab4.5_0007518g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.1e-28 129.8 158 47.5
Sopen05g026830 Solanum pennellii HOM05D000011 ORTHO05D001721 2.1e-28 129.8 206 40.8
Sopen05g026680 Solanum pennellii HOM05D000011 ORTHO05D013051 2.7e-28 129.4 193 44.6
CAN.G2014.1 Capsicum annuum HOM05D000011 ORTHO05D013051 3.5e-28 129.0 195 41.0
CAN.G449.53 Capsicum annuum HOM05D000011 ORTHO05D013051 3.5e-28 129.0 195 41.0
Nitab4.5_0011460g0010 Nicotiana tabacum HOM05D000011 ORTHO05D013051 7.9e-28 127.9 182 44.0
Nitab4.5_0000295g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.0e-27 127.5 160 46.2
Sopen05g032470 Solanum pennellii HOM05D000011 ORTHO05D001721 1.0e-27 127.5 190 41.1
CAN.G203.1 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-27 126.7 190 40.5
Nitab4.5_0003288g0050 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.9e-27 125.6 158 46.8
CAN.G1447.12 Capsicum annuum HOM05D000011 ORTHO05D001721 5.1e-27 125.2 128 52.3
CAN.G1744.6 Capsicum annuum HOM05D000011 ORTHO05D001721 6.7e-27 124.8 211 38.4
Nitab4.5_0009433g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 8.7e-27 124.4 157 46.5
Sopen05g032490 Solanum pennellii HOM05D000011 ORTHO05D013051 8.7e-27 124.4 195 42.1
CAN.G449.6 Capsicum annuum HOM05D000011 ORTHO05D013051 1.1e-26 124.0 189 41.8
Nitab4.5_0000295g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.3e-26 122.5 158 44.3
Nitab4.5_0003671g0050 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.1e-25 119.8 137 47.4
CAN.G1953.3 Capsicum annuum HOM05D000011 ORTHO05D001721 2.8e-25 119.4 176 44.3
Nitab4.5_0005485g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.8e-25 119.4 158 44.3
Nitab4.5_0015135g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.7e-25 119.0 158 43.7
Solyc05g043420.2 Solanum lycopersicum HOM05D000011 ORTHO05D001721 4.8e-25 118.6 129 50.4
Nitab4.5_0000295g0060 Nicotiana tabacum HOM05D000011 ORTHO05D001721 8.1e-25 117.9 176 42.6
Nitab4.5_0009433g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.4e-24 117.1 160 41.9
Nitab4.5_0027320g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.4e-24 117.1 158 43.0
Nitab4.5_0003836g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.4e-24 116.3 200 37.5
Nitab4.5_0002977g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.1e-24 115.9 158 44.9
Nitab4.5_0012015g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.1e-24 115.9 157 44.6
Nitab4.5_0001881g0080 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.0e-24 114.4 76 71.1
Nitab4.5_0007572g0070 Nicotiana tabacum HOM05D000011 ORTHO05D013051 1.2e-23 114.0 192 41.7
Nitab4.5_0000488g0160 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.4e-23 112.5 134 46.3
CAN.G1646.17 Capsicum annuum HOM05D000011 ORTHO05D001721 4.5e-23 112.1 75 69.3
Nitab4.5_0010841g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.5e-23 112.1 73 67.1
CAN.G1768.14 Capsicum annuum HOM05D000011 ORTHO05D115065 1.9e-21 106.7 66 69.7
CAN.G1447.7 Capsicum annuum HOM05D000011 ORTHO05D001721 5.5e-21 105.1 87 59.8
CAN.G1798.1 Capsicum annuum HOM05D000011 ORTHO05D001721 1.2e-20 104.0 210 35.7
CAN.G1590.3 Capsicum annuum HOM05D000011 ORTHO05D001721 2.1e-20 103.2 211 34.1
Peaxi162Scf01079g00221 Petunia axillaris HOM05D000011 ORTHO05D001721 2.7e-20 102.8 194 38.7
Peaxi162Scf00034g00176 Petunia axillaris HOM05D000011 ORTHO05D001721 4.6e-20 102.1 170 41.8
CAN.G1268.1 Capsicum annuum HOM05D000011 ORTHO05D001721 6.0e-20 101.7 129 44.2
CAN.G449.3 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-19 100.1 202 36.1
Nitab4.5_0003836g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.8e-19 100.1 137 41.6
CAN.G1926.4 Capsicum annuum HOM05D000011 ORTHO05D013051 2.3e-19 99.8 118 50.0
Nitab4.5_0005485g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.5e-18 97.1 88 50.0
Nitab4.5_0007572g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.1e-17 93.2 79 59.5
PGSC0003DMG400018954 Solanum tuberosum HOM05D000011 ORTHO05D001721 2.8e-17 92.8 204 31.9
Nitab4.5_0007572g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.7e-17 92.4 76 57.9
Nitab4.5_0001512g0030 Nicotiana tabacum HOM05D000011 ORTHO05D013051 1.4e-16 90.5 161 35.4
CAN.G1617.9 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-16 90.1 106 46.2
CAN.G869.10 Capsicum annuum HOM05D000011 ORTHO05D001721 5.3e-16 88.6 53 71.7
CAN.G1768.3 Capsicum annuum HOM05D000011 ORTHO05D001721 9.0e-16 87.8 53 69.8
CAN.G449.1 Capsicum annuum HOM05D000011 ORTHO05D001721 9.0e-16 87.8 82 52.4
PGSC0003DMG400020739 Solanum tuberosum HOM05D000011 ORTHO05D398615 1.5e-15 87.0 123 43.1
Nitab4.5_0021935g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.0e-15 86.7 51 72.5
Peaxi162Scf00034g01613 Petunia axillaris HOM05D000011 ORTHO05D001721 2.0e-15 86.7 199 34.2
Sopen05g032510 Solanum pennellii HOM05D000011 ORTHO05D001721 2.0e-15 86.7 206 35.9
PGSC0003DMG400032281 Solanum tuberosum HOM05D000011 ORTHO05D001721 2.0e-15 86.7 227 30.4
Sopen05g027950 Solanum pennellii HOM05D000011 ORTHO05D001721 2.6e-15 86.3 194 32.0
Nitab4.5_0001740g0130 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.4e-15 85.9 49 75.5
CAN.G1696.3 Capsicum annuum HOM05D000011 ORTHO05D013051 4.5e-15 85.5 174 35.6
CAN.G241.11 Capsicum annuum HOM05D000011 ORTHO05D001721 5.8e-15 85.1 51 68.6
Peaxi162Scf01385g00030 Petunia axillaris HOM05D000011 ORTHO05D001721 5.8e-15 85.1 107 43.0
Nitab4.5_0009910g0030 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.3e-14 84.0 139 39.6
CAN.G941.19 Capsicum annuum HOM05D000011 ORTHO05D001721 3.8e-14 82.4 53 67.9
CAN.G2072.4 Capsicum annuum HOM05D000011 ORTHO05D013051 1.4e-13 80.5 139 38.8
Nitab4.5_0002803g0010 Nicotiana tabacum HOM05D000011 ORTHO05D012346 1.6e-12 77.0 152 32.2
Sopen05g032810 Solanum pennellii HOM05D000011 ORTHO05D001721 1.6e-12 77.0 117 47.0
CAN.G1440.20 Capsicum annuum HOM05D000011 ORTHO05D001721 2.1e-12 76.6 44 70.5
CAN.G74.34 Capsicum annuum HOM05D000011 ORTHO05D012346 2.1e-12 76.6 136 30.9
CAN.G203.23 Capsicum annuum HOM05D000002 ORTHO05D000001 2.7e-12 76.3 185 30.3
Peaxi162Scf00008g00316 Petunia axillaris HOM05D000011 ORTHO05D001721 3.5e-12 75.9 148 37.8
CAN.G741.8 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-11 73.9 52 57.7
Nitab4.5_0000916g0030 Nicotiana tabacum HOM05D000011 ORTHO05D012346 1.8e-11 73.6 152 33.6
Nitab4.5_0003836g0090 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.9e-10 70.1 163 32.5
CAN.G1646.20 Capsicum annuum HOM05D000011 ORTHO05D001721 2.5e-10 69.7 44 65.9
CAN.G1676.3 Capsicum annuum HOM05D000011 ORTHO05D001721 4.3e-10 68.9 102 41.2
PGSC0003DMG400020735 Solanum tuberosum HOM05D000011 ORTHO05D001721 9.7e-10 67.8 39 69.2
CAN.G1268.5 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-09 67.4 47 66.0
CAN.G1492.1 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-09 67.4 40 67.5
CAN.G2072.1 Capsicum annuum HOM05D000011 ORTHO05D001721 3.7e-09 65.9 54 59.3
CAN.G941.20 Capsicum annuum HOM05D000011 ORTHO05D013051 4.8e-09 65.5 101 39.6
CAN.G1287.8 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-08 64.3 43 65.1
CAN.G1703.19 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-08 64.3 39 71.8
CAN.G941.24 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-08 64.3 54 61.1
Solyc05g054340.4 Solanum lycopersicum HOM05D000011 ORTHO05D001721 1.4e-08 63.9 101 46.5
Sopen05g032480 Solanum pennellii HOM05D000011 ORTHO05D001721 2.4e-08 63.2 74 50.0
CAN.G895.20 Capsicum annuum HOM05D000011 ORTHO05D001721 3.1e-08 62.8 39 69.2
Sopen04g003290 Solanum pennellii HOM05D000011 ORTHO05D012346 4.1e-08 62.4 115 33.0
CAN.G241.10 Capsicum annuum HOM05D000011 ORTHO05D001721 1.2e-07 60.8 106 35.8
Sopen05g032500 Solanum pennellii HOM05D000011 ORTHO05D001721 5.9e-07 58.5 143 32.2
Sopen04g003300 Solanum pennellii HOM05D000011 ORTHO05D012346 1.3e-06 57.4 124 28.2
Nitab4.5_0000777g0130 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.2e-06 56.6 91 38.5


User provided reference genes

Program Settings