Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1438.1 Capsicum annuum HOM05D000002 ORTHO05D000001 8.9e-31 136.3 71 100.0
CSS0013769 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-15 84.7 70 64.3
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-15 84.3 70 62.9
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-15 84.3 70 62.9
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-14 82.4 70 61.4
Atru.chr4.1540 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-14 82.0 70 60.0
Atru.chr5.2716 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-14 82.0 70 61.4
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.8e-14 80.5 70 60.0
RhsimUnG0178000 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.8e-14 80.5 70 60.0
CSS0010947 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-14 80.1 70 58.6
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.5e-14 80.1 70 60.0
Rhsim02G0093500 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.9e-14 79.7 70 60.0
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 9.9e-14 79.7 70 60.0
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.9e-14 79.7 70 60.0
RhsimUnG0182300 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.9e-14 79.7 70 60.0
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 9.9e-14 79.7 70 55.7
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 9.9e-14 79.7 70 55.7
CSS0016567 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-13 79.3 70 61.4
Manes.10G112229 Manihot esculenta HOM05D000002 ORTHO05D000001 1.3e-13 79.3 70 54.3
Nn1g04729 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.4e-13 77.0 69 59.4
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.3e-13 76.6 70 57.1
Nn2g13324 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.3e-13 76.6 69 58.0
EL10Ac8g19578 Beta vulgaris HOM05D000002 ORTHO05D000001 1.1e-12 76.3 70 54.3
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-12 76.3 70 57.1
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-12 76.3 70 57.1
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-12 76.3 70 57.1
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-12 76.3 70 57.1
Hma1.2p1_0414F.1_g147800 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-12 75.5 70 55.7
Nn1g06669 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-12 75.1 70 60.0
CANSAT01G2627 Cannabis sativa HOM05D000002 ORTHO05D000001 3.2e-12 74.7 70 55.7
RcHm_v2.0_Chr4g0409151 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-12 74.7 70 57.1
Ciclev10013956m.g Citrus clementina HOM05D000002 ORTHO05D000001 4.1e-12 74.3 70 57.1
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-12 73.9 70 55.7
CSS0041440 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-12 73.9 70 57.1
CSS0002244 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-12 73.6 70 57.1
Hma1.2p1_0176F.1_g077340 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-12 73.6 70 57.1
Hma1.2p1_0820F.1_g223995 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-12 73.6 70 55.7
Hma1.2p1_0820F.1_g224020 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-12 73.6 70 55.7
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 9.2e-12 73.2 70 52.9
CSS0005068 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-11 72.8 70 54.3
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-11 72.8 70 55.7
CSS0003655 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 72.4 70 54.3
CSS0015826 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 72.4 68 55.9
CSS0024481 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 72.4 70 54.3
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 1.6e-11 72.4 70 55.7
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-11 72.4 71 57.7
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-11 72.0 70 54.3
CSS0044856 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-11 72.0 70 54.3
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-11 72.0 70 55.7
Nn2g12419 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.1e-11 72.0 70 54.3
Nn4g24384 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.1e-11 72.0 70 52.9
Nn4g26285 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.1e-11 72.0 70 54.3
Nn1g06976 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.7e-11 71.6 70 54.3
CSS0037972 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-11 71.2 70 52.9
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 3.5e-11 71.2 70 57.1
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-11 71.2 70 57.1
CSS0025880 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-11 70.9 63 60.3
CSS0040283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-11 70.9 70 52.9
CSS0047274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-11 70.9 70 54.3
Sopen01g009120 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-11 70.9 70 57.1
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 54.3
Hma1.2p1_0184F.1_g081330 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 50.0
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 50.0
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-11 70.5 71 56.3
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 52.9
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 52.9
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 52.9
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 52.9
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 52.9
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 52.9
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-11 70.5 70 52.9
CSS0017329 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-11 70.1 70 52.9
CSS0021106 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-11 70.1 70 52.9
Nn2g14659 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.8e-11 70.1 70 50.0
Sopen11g022020 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-11 70.1 70 52.9
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-10 69.7 70 52.9
Sopen10g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-10 69.7 70 57.1
Nn1g07710 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-10 69.3 70 52.9
CSS0042530 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-10 68.9 70 54.3
CSS0048686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-10 68.6 63 58.7
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-10 68.6 70 47.1
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-10 68.6 70 52.9
MSTRG.3250 Avicennia marina HOM05D000002 ORTHO05D000001 3.0e-10 68.2 70 51.4
CSS0000038 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-10 68.2 70 55.7
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-10 68.2 70 51.4
Lalb_Chr23g0274091 Lupinus albus HOM05D000002 ORTHO05D000001 3.0e-10 68.2 70 52.9
Nn4g26209 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.9e-10 67.8 70 52.9
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-10 67.4 70 51.4
Nn7g37206 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.6e-10 67.0 70 51.4
Sopen07g012350 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-10 67.0 70 51.4
Nn1g04728 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.6e-10 66.6 61 59.0
BolC4t26198H Brassica oleracea HOM05D000002 ORTHO05D000001 1.1e-09 66.2 70 51.4
Sopen10g012380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-09 66.2 70 54.3
Atru.chr10.1094 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 50.0
CSS0020765 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 48.6
FvH4_6g43841 Fragaria vesca HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 51.4
Manes.09G095934 Manihot esculenta HOM05D000002 ORTHO05D000001 1.9e-09 65.5 70 50.0
Sopen01g013490 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-09 65.1 70 51.4
Sopen07g005890 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-09 65.1 70 51.4
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-09 63.9 70 52.9
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-09 63.5 70 45.7
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-09 63.5 70 50.0
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-09 63.5 70 48.6
SHI52580 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 62.4 70 50.0
SHI53128 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 62.4 70 50.0
Sopen03g020180 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-08 62.0 70 51.4
ECA234G4791 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-08 61.6 70 42.9
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-08 60.5 66 48.5
Sopen01g011890 Solanum pennellii HOM05D000002 ORTHO05D000001 6.2e-08 60.5 70 48.6
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.1e-08 60.1 70 50.0
C03p36830 Brassica napus HOM05D000002 ORTHO05D000001 1.1e-07 59.7 70 44.3
Nn5g26837 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-07 59.7 68 50.0
VMungo1309G0289 Vigna mungo HOM05D002892 ORTHO05D003224 1.1e-07 59.7 69 44.9
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 1.8e-07 58.9 70 45.7
ECA248G1474 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-07 58.5 68 45.6
CSS0046990 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-07 58.2 70 51.4
ECA246G0354 Erigeron canadensis HOM05D000230 ORTHO05D000176 3.1e-07 58.2 70 44.3
Nn2g15368 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.1e-07 58.2 70 50.0
CSS0019043 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-07 57.8 70 50.0
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.0e-07 57.8 70 45.7
ECA240G1585 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-07 57.4 70 42.9
Nn8g40241 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.2e-07 57.4 70 52.9
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 5.2e-07 57.4 70 44.3
VMungo0331G0698 Vigna mungo HOM05D000092 ORTHO05D000042 5.2e-07 57.4 56 50.0
ECA232G4093 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-07 57.0 70 44.3
Nn1g02200 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.8e-07 57.0 70 41.4
CSS0034655 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-07 56.6 70 48.6
CSS0044932 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-07 56.6 63 50.8
ECA234G3833 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-07 56.6 70 42.9
ECA240G2252 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-07 56.6 63 44.4
Sopen01g013110 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 70 47.1
CSS0013581 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-06 55.5 59 54.2
ECA238G0437 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-06 55.5 70 41.4
Ciclev10013585m.g Citrus clementina HOM05D000002 ORTHO05D000001 2.6e-06 55.1 70 44.3
PSO541G3208 Papaver somniferum HOM05D000002 ORTHO05D000001 5.8e-06 53.9 73 42.5
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-06 53.5 70 40.0


User provided reference genes

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