Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.4e-60 236.1 122 100.0
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 5.2e-47 191.0 122 85.2
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.2e-46 189.9 122 84.4
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.1e-41 173.3 122 77.9
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.2e-40 169.9 122 76.2
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 1.1e-39 166.8 122 77.9
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 1.9e-28 129.4 129 55.8
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 4.2e-28 128.3 86 74.4
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 9.3e-28 127.1 124 58.1
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 9.3e-28 127.1 100 68.0
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 3.5e-27 125.2 125 53.6
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 4.6e-27 124.8 90 68.9
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.0e-26 123.6 132 56.1
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 1.3e-26 123.2 94 69.1
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.7e-26 122.9 90 72.2
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 3.9e-26 121.7 126 50.0
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.9e-26 121.7 122 59.0
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 6.6e-26 120.9 94 66.0
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.6e-26 120.9 127 50.4
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.6e-26 120.9 127 50.4
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 6.6e-26 120.9 132 52.3
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 6.6e-26 120.9 90 68.9
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 1.1e-25 120.2 86 67.4
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.5e-25 119.8 86 67.4
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.9e-25 119.4 117 57.3
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.5e-25 119.0 90 63.3
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 2.5e-25 119.0 123 52.8
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 3.3e-25 118.6 125 57.6
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 7.3e-25 117.5 128 56.2
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 1.3e-24 116.7 131 54.2
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.3e-24 116.7 90 62.2
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 2.8e-24 115.5 126 56.3
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 3.6e-24 115.2 116 55.2
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 3.6e-24 115.2 110 60.0
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 6.2e-24 114.4 125 51.2
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 6.2e-24 114.4 126 56.3
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 6.2e-24 114.4 94 64.9
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 8.1e-24 114.0 126 55.6
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 8.1e-24 114.0 127 52.8
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 8.1e-24 114.0 168 44.0
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 1.4e-23 113.2 96 63.5
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.8e-23 112.8 96 61.5
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 1.8e-23 112.8 126 54.8
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 3.1e-23 112.1 109 59.6
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 3.1e-23 112.1 87 66.7
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 4.0e-23 111.7 129 51.2
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 5.3e-23 111.3 83 67.5
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 5.3e-23 111.3 83 67.5
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 5.3e-23 111.3 86 67.4
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 6.9e-23 110.9 97 58.8
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 9.0e-23 110.5 87 66.7
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 2.0e-22 109.4 133 50.4
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 2.6e-22 109.0 103 61.2
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 3.4e-22 108.6 125 48.8
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 4.4e-22 108.2 124 51.6
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 5.8e-22 107.8 124 51.6
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 7.6e-22 107.5 124 51.6
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 9.9e-22 107.1 91 61.5
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 9.9e-22 107.1 91 61.5
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 9.9e-22 107.1 123 49.6
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 9.9e-22 107.1 73 68.5
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.7e-21 106.3 105 54.3
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.7e-21 106.3 127 51.2
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 2.2e-21 105.9 127 51.2
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 2.2e-21 105.9 123 49.6
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 3.8e-21 105.1 92 62.0
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 4.9e-21 104.8 126 50.8
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 4.9e-21 104.8 94 58.5
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 3.2e-20 102.1 124 48.4
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 7.1e-20 100.9 71 74.6
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 9.3e-20 100.5 66 80.3
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.2e-19 100.1 89 55.1
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-19 99.8 73 64.4
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 2.1e-19 99.4 129 49.6
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 4.6e-19 98.2 91 57.1
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 6.0e-19 97.8 114 50.9
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.7e-18 96.3 89 60.7
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.7e-18 96.3 89 60.7
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.3e-18 95.9 91 56.0
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 3.9e-18 95.1 116 47.4
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.1e-17 93.6 122 45.1
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 1.5e-17 93.2 124 46.0
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 1.5e-17 93.2 124 46.0
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 2.5e-17 92.4 124 46.0
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 3.3e-17 92.0 67 67.2
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 4.3e-17 91.7 124 44.4
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 1.6e-16 89.7 87 58.6
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 2.1e-16 89.4 59 78.0
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 1.4e-15 86.7 61 70.5
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 2.4e-15 85.9 80 56.2
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 7.6e-14 80.9 67 65.7
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 2.2e-13 79.3 151 36.4
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 3.8e-13 78.6 68 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 2.4e-12 75.9 67 55.2
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.6e-11 73.2 46 76.1
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.8e-08 62.4 68 47.1
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 5.3e-07 58.2 77 54.5


User provided reference genes

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