Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 7.0e-125 450.7 233 100.0
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.9e-106 389.4 221 88.7
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 4.6e-100 368.2 218 85.3
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 8.6e-99 364.0 218 85.3
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.8e-81 305.8 226 71.2
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.1e-80 303.9 224 69.2
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.4e-80 303.5 226 68.6
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 1.4e-80 303.5 225 68.9
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 4.0e-80 302.0 226 68.1
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 4.0e-80 302.0 223 68.2
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 8.9e-80 300.8 226 67.3
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.2e-79 300.4 226 68.1
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 2.0e-79 299.7 226 68.1
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 2.0e-79 299.7 223 67.7
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 2.0e-79 299.7 218 70.6
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 3.4e-79 298.9 229 67.2
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 4.4e-79 298.5 229 66.8
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 5.8e-79 298.1 223 67.7
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 9.9e-79 297.4 238 65.1
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.2e-78 296.2 221 68.3
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 2.2e-78 296.2 226 67.7
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 2.9e-78 295.8 223 66.4
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 3.8e-78 295.4 225 65.8
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.9e-78 295.0 221 68.3
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 8.4e-78 294.3 213 69.5
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 1.1e-77 293.9 221 68.3
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 4.1e-77 292.0 224 66.1
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 9.2e-77 290.8 224 67.9
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.6e-76 290.0 226 66.4
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 2.1e-76 289.7 225 64.0
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 3.5e-76 288.9 224 64.7
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 3.5e-76 288.9 215 66.5
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 6.0e-76 288.1 226 66.4
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 6.0e-76 288.1 223 63.7
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 7.8e-76 287.7 213 67.6
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 1.0e-75 287.3 227 65.6
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.3e-75 287.0 213 67.6
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.3e-75 287.0 227 64.8
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 1.3e-75 287.0 217 66.8
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 1.7e-75 286.6 226 63.3
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 3.0e-75 285.8 225 62.7
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.0e-75 285.8 227 64.8
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 3.9e-75 285.4 227 63.9
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 5.1e-75 285.0 226 65.5
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 5.1e-75 285.0 227 64.3
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.9e-74 283.1 227 64.3
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 4.3e-74 282.0 226 62.8
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 5.6e-74 281.6 213 66.7
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 7.3e-74 281.2 213 66.2
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 9.6e-74 280.8 213 66.2
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 4.7e-73 278.5 223 64.6
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 4.7e-73 278.5 215 66.5
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 6.2e-73 278.1 225 63.1
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.1e-72 277.3 212 64.2
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 1.1e-72 277.3 226 61.5
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.4e-72 276.9 243 60.1
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 5.2e-72 275.0 215 65.6
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 6.9e-72 274.6 226 62.4
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.2e-71 273.9 213 64.3
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 2.6e-71 272.7 202 70.3
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 3.4e-71 272.3 213 63.8
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 3.4e-71 272.3 203 67.5
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 5.8e-71 271.6 220 63.2
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 7.6e-71 271.2 225 61.3
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 3.2e-69 265.8 230 60.9
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 3.2e-69 265.8 227 60.4
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 5.4e-69 265.0 220 60.5
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 1.2e-68 263.8 218 63.8
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 2.7e-68 262.7 219 59.8
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 3.5e-68 262.3 224 61.2
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 4.6e-68 261.9 213 61.0
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 6.0e-68 261.5 216 62.0
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 3.0e-67 259.2 225 58.7
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 5.1e-67 258.5 222 60.8
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 6.6e-67 258.1 215 60.5
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 6.6e-67 258.1 213 62.0
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 1.9e-66 256.5 216 60.2
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 5.6e-66 255.0 225 57.8
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 2.1e-65 253.1 227 57.7
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 8.1e-65 251.1 225 56.9
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.1e-64 250.8 225 56.9
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 1.1e-64 250.8 216 61.6
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.4e-64 250.4 225 57.3
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.4e-64 250.4 225 57.3
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.4e-64 250.4 208 61.5
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.8e-64 250.0 224 58.0
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 1.8e-64 250.0 227 55.9
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 1.8e-64 250.0 251 53.0
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 3.1e-64 249.2 216 58.3
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 6.9e-64 248.1 227 57.3
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 1.5e-63 246.9 228 56.6
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 1.5e-63 246.9 224 58.9
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 3.4e-63 245.7 139 87.1
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 7.6e-63 244.6 221 57.5
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 8.4e-54 214.5 191 57.1
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 3.5e-52 209.1 222 51.8
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 4.6e-52 208.8 177 65.0
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 5.6e-50 201.8 158 63.9
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 4.9e-46 188.7 165 61.2
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 1.6e-44 183.7 141 68.1
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 3.3e-42 176.0 212 43.9
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 2.7e-36 156.4 195 44.1
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 6.1e-36 155.2 158 51.9
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.3e-35 154.1 149 52.3
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.9e-34 150.2 210 41.9
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 3.3e-34 149.4 213 38.0
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.7e-33 147.1 205 43.9
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 1.1e-32 144.4 211 37.0
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 5.9e-31 138.7 219 34.2
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.4e-24 116.7 92 67.4
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 2.0e-23 113.6 118 50.0
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 3.8e-22 109.4 110 55.5
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.1e-20 103.6 86 59.3
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 3.6e-20 102.8 208 32.7
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 1.2e-07 61.2 43 65.1
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 6.5e-06 55.5 43 53.5


User provided reference genes

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