Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.5e-273 945.7 490 100.0
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 5.8e-222 774.2 492 84.8
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 2.2e-221 772.3 507 82.6
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 2.1e-211 739.2 569 73.3
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 4.6e-195 684.9 539 70.7
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.0e-181 640.6 479 73.1
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 8.5e-181 637.5 500 71.0
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 4.0e-154 548.9 514 59.7
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 8.9e-138 494.6 505 54.7
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 3.4e-137 492.7 505 55.2
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 5.7e-137 491.9 523 53.5
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 1.3e-136 490.7 516 54.5
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 3.7e-136 489.2 512 55.5
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 4.1e-135 485.7 514 53.7
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 7.0e-135 485.0 511 53.2
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 9.2e-135 484.6 515 53.6
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.2e-134 484.2 488 53.9
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 2.7e-134 483.0 511 52.4
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.3e-133 480.7 536 50.7
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.3e-133 480.7 519 54.3
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 8.6e-133 478.0 507 52.9
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.9e-132 476.9 502 52.2
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 7.3e-132 474.9 489 54.4
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 9.5e-132 474.6 493 53.1
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 6.2e-131 471.9 507 51.7
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.4e-130 470.7 533 52.5
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 6.8e-130 468.4 484 53.1
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 8.9e-130 468.0 516 53.1
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.2e-129 467.6 520 51.5
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.2e-129 467.6 514 50.8
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 4.4e-129 465.7 495 53.3
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 4.4e-129 465.7 485 53.4
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 7.5e-129 464.9 498 54.4
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 9.8e-129 464.5 485 53.4
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 9.8e-129 464.5 493 52.7
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.7e-128 463.8 502 52.6
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.2e-128 463.4 533 51.4
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.4e-127 460.7 504 53.8
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 4.1e-127 459.1 507 50.9
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 5.4e-127 458.8 468 54.9
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 5.4e-127 458.8 498 52.4
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.2e-126 457.6 477 54.3
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 2.0e-126 456.8 562 49.5
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 4.6e-126 455.7 464 54.5
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 6.0e-126 455.3 455 55.2
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 7.8e-126 454.9 491 53.8
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 3.0e-125 453.0 509 51.7
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 8.6e-125 451.4 484 53.1
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 9.5e-124 448.0 514 52.5
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 8.1e-123 444.9 502 50.8
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 8.1e-123 444.9 498 52.4
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 2.2e-120 436.8 473 52.2
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 1.1e-119 434.5 492 48.4
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 4.1e-119 432.6 492 51.0
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 2.1e-118 430.3 460 52.8
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 3.5e-118 429.5 475 51.6
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 3.5e-118 429.5 445 52.8
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 4.6e-118 429.1 508 49.2
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 1.3e-117 427.6 511 48.7
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 5.1e-117 425.6 523 47.0
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 3.6e-115 419.5 408 55.4
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.4e-114 417.5 517 46.8
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 1.8e-114 417.2 472 51.9
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 4.0e-114 416.0 505 47.9
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 6.8e-114 415.2 562 45.0
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.6e-113 413.3 420 56.4
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.6e-113 413.3 420 56.4
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 4.4e-113 412.5 481 55.3
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 2.9e-112 409.8 499 47.5
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 6.4e-112 408.7 505 46.7
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 8.4e-112 408.3 566 44.7
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 8.4e-112 408.3 508 47.4
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 4.1e-111 406.0 525 48.2
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 9.2e-111 404.8 497 46.7
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 5.1e-109 399.1 457 50.8
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 2.8e-107 393.3 489 45.8
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 4.7e-107 392.5 495 45.7
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.4e-106 390.2 440 50.9
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 6.8e-106 388.7 497 47.1
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.2e-105 387.9 497 47.1
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 1.3e-104 384.4 529 45.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 9.3e-103 378.3 373 59.0
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 2.1e-102 377.1 500 45.8
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 6.0e-102 375.6 406 52.5
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.3e-101 374.4 517 42.7
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 1.5e-100 370.9 517 44.5
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.9e-100 370.5 525 42.9
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 7.3e-100 368.6 425 49.6
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 3.6e-99 366.3 517 43.7
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.7e-96 357.5 472 47.2
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 5.4e-95 352.4 549 40.8
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 7.1e-95 352.1 350 57.1
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 3.8e-88 329.7 432 44.4
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.0e-81 307.4 518 39.4
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.0e-80 305.1 518 38.6
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 6.7e-77 292.4 359 47.6
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 2.8e-75 287.0 437 42.8
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 2.2e-72 277.3 474 39.2
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 9.0e-66 255.4 351 41.6
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 2.6e-65 253.8 379 40.4
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 2.9e-64 250.4 370 39.7
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 2.1e-62 244.2 377 42.2
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 2.7e-62 243.8 198 65.2
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 1.7e-59 234.6 334 41.3
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.7e-48 198.0 190 56.8
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 4.0e-45 186.8 228 48.2
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 2.2e-43 181.0 200 50.5
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 1.1e-42 178.7 195 49.2
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 8.0e-38 162.5 197 47.2
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 1.8e-37 161.4 210 48.1
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 7.0e-34 149.4 161 51.6
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 2.3e-29 134.4 252 36.5
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 3.4e-20 104.0 485 25.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 4.6e-17 93.6 74 54.1
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.5e-15 88.6 137 42.3
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 8.9e-13 79.3 70 54.3
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 2.9e-11 74.3 94 42.6
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 4.1e-10 70.5 126 34.1
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 4.6e-09 67.0 56 58.9
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 2.5e-07 61.2 83 41.0
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.6e-06 58.5 89 40.4
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 2.1e-06 58.2 81 39.5
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 2.1e-06 58.2 81 39.5


User provided reference genes

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