Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 4.1e-62 241.1 113 100.0
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 3.1e-38 161.8 77 97.4
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 9.1e-38 160.2 77 94.8
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 2.7e-37 158.7 76 94.7
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 2.7e-37 158.7 77 93.5
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 3.2e-35 151.8 72 95.8
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 8.0e-34 147.1 76 90.8
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 9.2e-30 133.7 74 79.7
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 1.6e-29 132.9 76 76.3
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 2.7e-29 132.1 74 78.4
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 2.7e-29 132.1 74 78.4
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 3.5e-29 131.7 74 78.4
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 4.5e-29 131.3 79 74.7
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 7.8e-29 130.6 84 70.2
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 1.0e-28 130.2 79 73.4
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 1.0e-28 130.2 76 76.3
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 1.7e-28 129.4 78 74.4
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 2.9e-28 128.6 81 70.4
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 2.9e-28 128.6 76 76.3
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 6.6e-28 127.5 79 72.2
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 8.6e-28 127.1 74 75.7
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 8.6e-28 127.1 74 75.7
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 1.9e-27 125.9 74 75.7
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 4.3e-27 124.8 68 79.4
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 5.6e-27 124.4 77 74.0
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 5.6e-27 124.4 74 74.3
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 5.6e-27 124.4 76 73.7
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 7.3e-27 124.0 89 64.0
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 9.5e-27 123.6 78 71.8
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 9.5e-27 123.6 79 69.6
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 9.5e-27 123.6 78 71.8
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 1.2e-26 123.2 76 75.0
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 1.6e-26 122.9 72 79.2
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 1.6e-26 122.9 72 79.2
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 2.1e-26 122.5 78 71.8
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.8e-26 122.1 93 62.4
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 2.8e-26 122.1 80 67.5
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 3.6e-26 121.7 79 67.1
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 4.7e-26 121.3 79 64.6
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 8.0e-26 120.6 74 73.0
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 1.0e-25 120.2 101 59.4
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 1.4e-25 119.8 78 65.4
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 1.4e-25 119.8 78 71.8
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.4e-25 119.8 74 73.0
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 2.3e-25 119.0 76 72.4
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 3.0e-25 118.6 79 65.8
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 4.0e-25 118.2 78 67.9
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 6.8e-25 117.5 78 65.4
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 8.9e-25 117.1 76 67.1
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 8.9e-25 117.1 76 71.1
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 1.2e-24 116.7 78 66.7
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 1.5e-24 116.3 77 68.8
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.0e-24 115.9 71 73.2
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 2.0e-24 115.9 79 68.4
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.6e-24 115.5 71 73.2
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 2.6e-24 115.5 76 65.8
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 2.6e-24 115.5 76 65.8
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 4.4e-24 114.8 85 65.9
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 4.4e-24 114.8 83 63.9
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 4.4e-24 114.8 74 66.2
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 7.5e-24 114.0 79 65.8
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 7.5e-24 114.0 79 67.1
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 7.5e-24 114.0 74 68.9
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 9.8e-24 113.6 79 64.6
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 1.3e-23 113.2 78 67.9
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 1.7e-23 112.8 79 63.3
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 2.2e-23 112.5 76 65.8
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 2.9e-23 112.1 71 71.8
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 3.7e-23 111.7 70 70.0
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 8.3e-23 110.5 71 69.0
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 8.3e-23 110.5 74 66.2
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 1.1e-22 110.2 79 67.1
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 4.1e-22 108.2 73 67.1
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 9.2e-22 107.1 74 68.9
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 3.5e-21 105.1 74 63.5
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 3.5e-21 105.1 74 66.2
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 3.3e-19 98.6 76 59.2
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 3.3e-19 98.6 73 58.9
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 1.2e-18 96.7 73 57.5
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.2e-18 96.7 71 59.2
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 1.6e-18 96.3 64 68.8
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 2.8e-18 95.5 76 57.9
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.1e-17 93.6 83 50.6
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.1e-17 93.6 83 50.6
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 3.1e-17 92.0 74 54.1
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 2.0e-16 89.4 64 64.1
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 4.4e-16 88.2 66 60.6
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 4.4e-16 88.2 91 46.2
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.3e-15 86.7 91 46.2
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 1.9e-14 82.8 75 48.0
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 1.2e-10 70.1 64 50.0
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 4.4e-08 61.6 62 45.2
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 6.4e-07 57.8 35 68.6
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 1.4e-06 56.6 53 47.2


User provided reference genes

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