Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.2e-202 708.8 354 100.0
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.1e-169 600.1 354 85.3
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.0e-155 552.7 307 88.6
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 4.9e-154 548.1 307 89.3
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 8.3e-154 547.4 312 86.2
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 6.0e-144 514.6 342 77.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.8e-132 476.5 322 73.3
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 4.0e-132 475.3 303 75.6
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.2e-128 463.8 321 70.7
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.9e-126 456.4 321 68.2
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 4.3e-126 455.3 330 70.3
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 5.6e-126 454.9 327 70.0
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.2e-125 451.4 286 75.2
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 6.2e-125 451.4 319 70.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 8.1e-125 451.1 358 64.0
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 6.9e-124 448.0 324 69.1
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 2.0e-123 446.4 346 64.7
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 3.4e-123 445.7 331 68.3
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 5.8e-123 444.9 285 74.0
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 5.8e-123 444.9 317 70.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 7.6e-123 444.5 282 74.1
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 7.6e-123 444.5 338 66.6
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.3e-122 443.7 313 71.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.2e-122 443.0 356 63.8
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 3.8e-122 442.2 330 66.4
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.4e-122 441.4 356 63.5
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 8.4e-122 441.0 282 73.4
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.9e-121 439.9 332 68.1
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.2e-121 439.1 353 64.6
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 4.2e-121 438.7 337 65.6
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 5.4e-121 438.3 326 66.3
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.2e-120 437.2 349 62.5
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.2e-120 437.2 320 67.5
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.6e-120 436.8 356 62.9
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.0e-119 432.6 348 63.8
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 3.0e-119 432.6 282 73.4
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 3.9e-119 432.2 283 72.8
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 5.1e-119 431.8 282 73.4
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 2.5e-118 429.5 323 66.3
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 4.3e-118 428.7 282 72.3
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 5.6e-118 428.3 336 64.0
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 1.3e-117 427.2 286 71.0
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 2.1e-117 426.4 336 63.4
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 2.8e-117 426.0 283 73.5
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 2.8e-117 426.0 334 63.8
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.1e-116 424.1 285 72.6
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.8e-116 423.3 282 72.7
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 4.0e-116 422.2 283 71.0
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 5.3e-116 421.8 285 70.5
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 6.9e-116 421.4 304 67.4
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 6.9e-116 421.4 305 67.9
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.2e-115 420.6 283 72.4
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 4.5e-115 418.7 313 66.5
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 4.5e-115 418.7 332 63.9
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 5.8e-115 418.3 376 59.6
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.3e-114 417.2 305 67.5
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.7e-114 416.8 321 63.6
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.7e-114 416.8 280 71.1
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.1e-113 414.1 325 64.0
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 5.5e-113 411.8 351 60.7
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 9.3e-113 411.0 309 66.0
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 9.3e-113 411.0 354 61.0
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 6.0e-112 408.3 315 64.4
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.0e-111 407.5 279 70.6
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.0e-111 407.5 279 72.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.8e-111 406.8 279 70.6
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 3.0e-111 406.0 325 64.0
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 5.1e-111 405.2 280 68.9
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 6.7e-111 404.8 279 71.7
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 6.7e-111 404.8 282 71.3
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 6.7e-111 404.8 347 62.5
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.5e-110 403.7 288 68.4
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.6e-109 400.2 242 83.5
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 4.8e-109 398.7 292 66.8
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 9.0e-108 394.4 287 67.2
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.6e-107 392.9 288 67.4
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 7.6e-107 391.3 320 61.2
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 7.6e-107 391.3 287 67.2
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.3e-106 390.6 312 63.1
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 4.9e-106 388.7 281 68.0
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 4.2e-105 385.6 356 57.3
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.6e-104 383.6 208 90.9
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.1e-102 377.5 348 58.9
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 2.4e-100 369.8 268 67.5
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.1e-97 360.9 263 66.9
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.5e-97 359.8 281 63.7
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.0e-95 354.4 283 62.9
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-94 350.9 276 63.8
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 2.5e-94 349.7 281 60.9
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.3e-94 349.0 268 65.7
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.2e-90 336.7 266 60.5
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 2.9e-90 336.3 221 72.9
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-89 334.3 293 59.7
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.9e-88 328.2 272 62.9
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 3.7e-85 319.3 288 60.1
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.2e-74 283.5 246 61.0
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.9e-73 280.4 380 41.3
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 6.8e-63 245.4 170 68.8
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 7.0e-60 235.3 160 71.2
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 2.6e-54 216.9 247 49.0
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.9e-53 212.6 142 71.1
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 6.3e-53 212.2 144 70.1
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.3e-47 193.7 170 57.1
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.0e-42 178.3 246 44.7
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 4.7e-40 169.5 107 71.0
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 6.2e-40 169.1 108 74.1
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.3e-37 158.7 176 51.7
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-36 158.3 176 51.7
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 4.0e-31 139.8 89 73.0
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 6.4e-29 132.5 82 75.6
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 7.1e-28 129.0 82 70.7
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.1e-23 115.2 66 77.3
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 3.5e-19 100.1 144 41.7
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.1e-17 95.1 81 61.7
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.5e-17 94.0 57 77.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.3e-10 70.9 63 54.0
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.6e-10 69.3 56 57.1
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 4.3e-09 66.6 41 70.7
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.6e-08 63.5 37 81.1
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.4e-07 61.6 81 42.0


User provided reference genes

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