Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 6.5e-240 833.6 396 100.0
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.2e-206 723.0 401 86.0
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.0e-205 719.9 401 84.8
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.2e-204 716.5 401 84.3
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 8.6e-200 700.3 402 83.6
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 5.4e-194 681.0 397 81.6
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 2.3e-192 675.6 401 81.5
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 2.5e-191 672.2 371 85.2
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 3.7e-187 658.3 357 85.2
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.4e-181 639.8 405 73.8
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.8e-181 639.4 398 73.4
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 6.8e-181 637.5 403 73.0
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 3.2e-178 628.6 398 72.6
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 9.2e-178 627.1 402 72.1
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 9.2e-178 627.1 398 73.1
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 1.2e-177 626.7 399 72.2
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 2.7e-177 625.5 400 73.0
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 4.6e-177 624.8 398 72.1
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 2.3e-176 622.5 399 72.4
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 6.6e-176 620.9 397 71.0
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 9.6e-175 617.1 398 70.9
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.2e-174 616.7 398 70.4
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 6.2e-174 614.4 399 70.4
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.1e-174 614.0 400 71.2
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.4e-173 613.2 397 69.8
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-173 612.1 400 71.0
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 3.1e-173 612.1 399 70.4
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-173 611.7 400 71.0
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.2e-173 611.3 400 71.2
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 6.9e-173 610.9 394 71.3
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.0e-173 610.5 400 71.2
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 9.0e-173 610.5 398 70.6
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 1.2e-172 610.1 401 69.6
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 1.5e-172 609.8 400 70.0
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 1.5e-172 609.8 403 69.5
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.5e-172 609.8 402 70.1
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-172 609.4 400 71.0
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-172 609.4 400 71.0
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-172 609.0 400 71.0
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-172 609.0 400 71.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.6e-172 609.0 400 71.0
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.6e-172 609.0 401 69.8
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.4e-172 608.2 400 70.5
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 7.6e-172 607.4 398 69.8
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 9.9e-172 607.1 402 70.4
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.7e-171 606.3 400 70.8
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.2e-171 605.9 400 69.8
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.8e-171 605.1 400 70.8
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.4e-170 603.2 394 70.8
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.4e-170 602.4 400 68.5
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 3.2e-170 602.1 399 70.4
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 9.3e-170 600.5 399 70.2
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 2.1e-169 599.4 398 69.8
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 2.1e-169 599.4 406 69.0
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 3.5e-169 598.6 397 70.8
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 3.5e-169 598.6 393 69.7
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.0e-168 597.0 399 69.2
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.3e-168 596.7 399 68.9
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.7e-168 596.3 387 70.8
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 3.9e-168 595.1 394 70.1
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 5.1e-168 594.7 406 69.0
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 6.6e-168 594.3 398 69.1
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 8.7e-168 594.0 399 68.2
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.1e-167 593.6 400 69.2
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 1.5e-167 593.2 408 63.7
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 2.5e-167 592.4 404 68.3
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 2.5e-167 592.4 394 69.3
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 3.6e-166 588.6 398 67.1
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 4.8e-166 588.2 400 68.2
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 6.9e-165 584.3 397 67.5
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.2e-164 583.6 394 68.0
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 2.0e-164 582.8 399 67.9
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 3.4e-164 582.0 400 66.8
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 1.7e-163 579.7 401 68.8
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 1.7e-163 579.7 374 70.9
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 2.9e-163 578.9 401 67.6
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 6.4e-163 577.8 401 67.1
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 3.2e-162 575.5 396 67.9
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 4.2e-162 575.1 353 73.4
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 8.7e-160 567.4 408 62.7
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 1.1e-159 567.0 367 69.8
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 3.8e-155 552.0 399 63.7
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.6e-150 536.6 397 62.7
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 8.2e-150 534.3 357 69.7
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.4e-149 533.5 400 64.2
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 1.5e-148 530.0 349 68.8
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 3.2e-146 522.3 397 62.7
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 7.1e-146 521.2 405 61.2
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 9.7e-143 510.8 411 59.9
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 6.9e-141 504.6 397 62.0
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 1.5e-135 486.9 408 57.1
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 2.8e-134 482.6 395 59.0
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 9.7e-127 457.6 402 56.0
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 5.0e-123 445.3 288 71.2
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 6.1e-113 411.8 351 59.0
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 4.0e-112 409.1 325 61.5
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 4.2e-98 362.5 402 48.0
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.3e-91 340.9 208 74.5
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.3e-91 340.1 293 57.3
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.1e-85 321.2 427 42.9
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.2e-78 297.0 432 40.0
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 1.3e-70 271.2 459 37.7
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.8e-64 250.8 299 45.5
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 5.1e-59 232.6 395 35.9
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.9e-58 230.7 158 65.8
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 4.9e-38 162.9 119 62.2
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.2e-37 160.2 306 33.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 3.4e-31 140.2 297 33.0
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 3.2e-29 133.7 89 71.9
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 4.8e-25 119.8 328 29.6
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.1e-20 104.4 67 74.6
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 2.0e-15 87.8 59 67.8
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 5.9e-07 59.7 76 44.7


User provided reference genes

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