Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.7e-111 406.0 198 100.0
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.8e-98 362.1 202 86.1
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 1.9e-83 312.8 194 74.7
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.1e-75 287.0 197 68.5
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 6.2e-74 281.2 194 67.0
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.4e-73 280.0 209 62.2
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 5.3e-73 278.1 195 69.2
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 6.9e-73 277.7 196 68.4
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.5e-72 276.6 217 61.8
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.3e-71 273.5 197 67.5
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.7e-71 273.1 208 63.5
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.7e-71 273.1 199 66.8
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.2e-70 268.9 194 64.4
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 5.5e-70 268.1 204 61.3
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 5.5e-70 268.1 194 64.9
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 5.5e-70 268.1 194 64.9
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 3.5e-69 265.4 196 61.7
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 4.6e-69 265.0 194 64.4
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 6.0e-69 264.6 207 62.8
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 7.9e-69 264.2 197 65.0
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 3.9e-68 261.9 204 59.8
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 3.9e-68 261.9 199 62.8
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 5.1e-68 261.5 200 62.0
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 5.1e-68 261.5 196 62.8
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 6.7e-68 261.2 211 62.6
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 8.7e-68 260.8 194 62.4
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.4e-67 257.7 194 62.4
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 9.6e-67 257.3 201 61.2
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.3e-66 256.9 194 62.4
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-66 256.9 194 62.4
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.3e-66 256.9 203 65.5
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.1e-66 256.1 201 61.7
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.8e-66 255.0 226 58.4
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 6.2e-66 254.6 198 61.6
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.8e-65 253.1 194 60.3
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.8e-65 253.1 199 63.3
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.1e-65 252.3 180 64.4
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 4.0e-65 251.9 194 61.9
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 4.0e-65 251.9 199 63.8
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 6.9e-65 251.1 196 59.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 1.2e-64 250.4 205 59.5
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 2.0e-64 249.6 194 60.3
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.6e-64 249.2 195 62.6
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 3.4e-64 248.8 186 64.5
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 5.8e-64 248.1 194 60.3
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 7.6e-64 247.7 197 64.0
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 1.0e-63 247.3 234 51.7
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.3e-63 246.9 202 59.9
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 2.2e-63 246.1 198 60.1
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 2.2e-63 246.1 199 60.3
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 2.9e-63 245.7 198 58.6
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 2.9e-63 245.7 196 60.7
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 3.8e-63 245.4 199 59.3
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 3.8e-63 245.4 201 58.7
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 3.8e-63 245.4 203 59.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.9e-63 245.0 195 59.5
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 4.9e-63 245.0 195 62.1
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 8.4e-63 244.2 199 59.8
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.1e-62 243.8 198 59.6
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.4e-62 243.4 198 59.6
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 2.5e-62 242.7 194 59.8
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 3.2e-62 242.3 201 58.7
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 3.2e-62 242.3 201 58.7
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 3.2e-62 242.3 195 60.5
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.6e-61 240.0 194 58.2
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.6e-61 240.0 199 58.3
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 4.6e-61 238.4 196 58.2
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 4.6e-61 238.4 197 61.4
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 7.9e-61 237.7 198 54.5
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.3e-60 236.9 195 60.0
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 3.0e-60 235.7 190 58.9
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 3.0e-60 235.7 203 57.6
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 3.0e-60 235.7 195 57.4
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 3.0e-60 235.7 195 57.9
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 3.9e-60 235.3 199 58.8
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 3.3e-59 232.3 195 59.0
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 4.3e-59 231.9 202 56.4
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 6.3e-58 228.0 196 57.1
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 1.4e-57 226.9 196 55.1
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.4e-57 226.9 177 61.0
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 6.9e-57 224.6 195 59.0
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 9.0e-57 224.2 196 54.6
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 2.0e-56 223.0 195 56.4
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 7.2e-54 214.5 203 53.7
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 1.3e-47 193.7 165 54.5
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.9e-47 192.6 138 62.3
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 3.8e-47 192.2 148 62.2
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.7e-45 186.0 142 59.2
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 6.1e-45 184.9 170 51.8
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.7e-43 177.6 208 49.5
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 5.3e-41 171.8 148 59.5
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 1.2e-37 160.6 190 47.4
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 7.9e-37 157.9 162 50.0
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.3e-36 156.4 135 57.8
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 5.1e-36 155.2 190 46.3
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 5.3e-33 145.2 168 50.0
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 5.9e-32 141.7 101 72.3
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.7e-29 132.9 129 48.8
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 5.3e-25 118.6 106 51.9
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 5.9e-24 115.2 98 60.2
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 3.8e-23 112.5 113 46.9
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 2.5e-22 109.8 162 35.2
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 3.2e-22 109.4 62 74.2
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.7e-18 97.1 164 36.0
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.1e-17 94.4 72 63.9
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 1.8e-17 93.6 51 78.4
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 1.2e-16 90.9 186 30.6
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.0e-15 87.8 206 37.9
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 2.5e-14 83.2 86 53.5
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 5.7e-11 72.0 85 47.1
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 9.8e-11 71.2 49 57.1
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.3e-10 70.9 38 84.2
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 1.7e-10 70.5 211 30.3
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 5.9e-08 62.0 58 58.6
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 1.0e-07 61.2 45 64.4


User provided reference genes

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