Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 0.0e+00 1283.9 671 100.0
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 0.0e+00 1146.7 669 90.1
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 0.0e+00 1137.5 669 89.5
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 0.0e+00 1130.2 669 89.2
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 0.0e+00 1082.8 676 85.7
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 0.0e+00 1082.0 666 85.6
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 5.5e-311 1070.5 671 85.1
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.1e-239 833.6 662 67.8
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.1e-238 829.3 669 67.9
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 3.5e-238 828.6 672 67.6
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 5.9e-233 811.2 668 65.9
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 2.5e-231 805.8 670 66.4
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 9.4e-231 803.9 672 66.7
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 8.8e-229 797.3 674 65.1
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 9.1e-226 787.3 673 64.6
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 5.0e-224 781.6 669 64.7
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 8.5e-224 780.8 669 64.4
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 6.1e-222 774.6 677 63.7
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 3.0e-221 772.3 666 63.7
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 6.7e-221 771.2 671 63.0
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 8.8e-221 770.8 663 64.4
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 8.8e-221 770.8 662 64.0
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 8.8e-221 770.8 682 63.2
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 4.4e-220 768.5 670 62.7
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 9.7e-220 767.3 662 63.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 5.9e-217 758.1 668 62.9
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 2.9e-216 755.7 700 61.4
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.1e-215 753.8 698 61.7
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 5.5e-215 751.5 674 62.3
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 6.1e-214 748.0 669 62.2
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.4e-213 746.9 673 62.4
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 2.3e-213 746.1 671 61.4
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 6.7e-213 744.6 674 62.6
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.0e-212 743.0 663 62.3
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 2.0e-212 743.0 677 61.7
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.6e-212 742.7 661 62.5
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 5.7e-212 741.5 671 62.4
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 7.4e-212 741.1 664 62.8
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.8e-211 738.4 661 62.2
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.1e-210 737.3 697 60.8
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.8e-210 736.5 667 61.2
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.4e-210 736.1 663 62.4
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.6e-209 732.6 671 61.7
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 7.7e-209 731.1 657 60.1
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.0e-208 730.7 688 61.2
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 6.5e-208 728.0 674 61.6
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 1.1e-207 727.2 672 61.3
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.5e-207 726.9 669 61.6
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 3.2e-207 725.7 675 60.7
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 5.5e-207 724.9 670 61.3
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 3.6e-206 722.2 688 60.8
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 3.6e-206 722.2 668 61.4
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 4.7e-206 721.8 671 61.4
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 1.8e-205 719.9 689 61.0
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 3.0e-205 719.2 659 59.8
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 6.7e-205 718.0 686 59.8
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 8.8e-205 717.6 684 59.9
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 4.4e-204 715.3 673 60.0
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 5.7e-204 714.9 663 60.5
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 2.2e-203 713.0 661 59.5
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 2.8e-203 712.6 671 59.9
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.5e-201 705.7 663 60.0
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.8e-200 702.2 663 60.5
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 1.1e-199 700.7 679 58.6
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 3.0e-197 692.6 667 60.1
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 6.8e-197 691.4 673 60.0
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 6.8e-197 691.4 663 59.1
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 7.5e-196 688.0 655 60.9
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.7e-195 686.8 674 59.2
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 3.5e-193 679.1 678 58.8
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 4.5e-193 678.7 667 57.9
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 2.3e-192 676.4 621 61.4
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 8.6e-192 674.5 599 62.6
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 5.5e-191 671.8 658 58.4
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 2.1e-190 669.8 669 56.4
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 4.7e-190 668.7 684 57.0
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 6.1e-190 668.3 668 57.9
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 3.0e-189 666.0 676 58.1
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 4.0e-189 665.6 657 55.6
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 8.3e-187 657.9 656 58.7
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 4.0e-181 639.0 661 55.4
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 4.0e-181 639.0 674 56.2
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 1.7e-179 633.6 689 56.7
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.0e-176 624.4 668 54.3
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 5.0e-176 622.1 653 55.7
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 6.6e-176 621.7 658 55.6
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.5e-175 620.5 675 52.6
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 3.6e-174 615.9 676 52.7
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 4.7e-174 615.5 672 53.1
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.8e-173 613.6 667 52.9
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 3.1e-173 612.8 642 56.2
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.4e-172 609.4 469 67.6
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 2.1e-166 590.1 678 50.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 3.6e-166 589.3 676 51.0
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 8.1e-166 588.2 671 52.2
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 8.1e-166 588.2 671 52.0
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.1e-165 587.8 677 51.0
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 2.3e-165 586.6 671 52.0
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.2e-164 584.3 671 51.6
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.2e-138 496.5 700 44.7
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.8e-133 480.7 677 44.0
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 5.8e-132 475.7 628 47.5
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 3.8e-131 473.0 351 72.9
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 5.6e-127 459.1 669 44.5
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 5.6e-127 459.1 695 41.0
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 4.2e-122 443.0 559 47.0
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 5.3e-117 426.0 665 40.8
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 2.7e-113 413.7 307 71.7
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 2.8e-102 377.1 334 59.0
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 8.8e-96 355.5 354 57.6
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 2.8e-94 350.5 310 61.0
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 2.5e-74 284.3 247 62.3
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 8.9e-72 275.8 628 32.6
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 9.8e-55 219.2 246 52.0
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 9.2e-45 186.0 330 40.9
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 5.1e-43 180.3 267 45.7
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.4e-39 167.2 221 42.1
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 8.1e-25 119.8 356 30.1
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.9e-14 84.0 178 34.8
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 7.1e-13 80.1 121 42.1
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 1.3e-11 75.9 87 48.3
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 5.8e-07 60.5 203 29.1


User provided reference genes

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