Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G14075.1 Capsicum annuum HOM05D000071 ORTHO05D003524 9.7e-69 263.5 143 100.0
CAN.G1433.15 Capsicum annuum HOM05D000071 ORTHO05D003524 3.3e-53 211.8 100 100.0
CAN.G1954.6 Capsicum annuum HOM05D000071 ORTHO05D003524 1.3e-49 199.9 100 95.0
CAN.G1013.18 Capsicum annuum HOM05D000071 ORTHO05D003524 2.9e-49 198.7 100 93.0
PGSC0003DMG400023498 Solanum tuberosum HOM05D000071 ORTHO05D003524 1.0e-41 173.7 99 81.8
CAN.G181.35 Capsicum annuum HOM05D000071 ORTHO05D003524 5.5e-40 167.9 98 78.6
Sopen05g033620 Solanum pennellii HOM05D000071 ORTHO05D003524 1.0e-38 163.7 99 77.8
CAN.G1433.14 Capsicum annuum HOM05D000071 ORTHO05D003524 1.4e-38 163.3 98 78.6
PGSC0003DMG400023396 Solanum tuberosum HOM05D000071 ORTHO05D003524 1.5e-37 159.8 94 77.7
CAN.G1013.17 Capsicum annuum HOM05D000071 ORTHO05D003524 2.0e-37 159.5 98 78.6
Nitab4.5_0013659g0010 Nicotiana tabacum HOM05D000071 ORTHO05D003524 3.4e-37 158.7 96 76.0
Solyc05g055190.1 Solanum lycopersicum HOM05D000071 ORTHO05D003524 7.5e-37 157.5 99 74.7
Nitab4.5_0000687g0250 Nicotiana tabacum HOM05D000071 ORTHO05D003524 1.3e-36 156.8 96 77.1
Nitab4.5_0017347g0010 Nicotiana tabacum HOM05D000071 ORTHO05D003524 2.8e-36 155.6 92 79.3
Nitab4.5_0000687g0240 Nicotiana tabacum HOM05D000071 ORTHO05D003524 4.9e-36 154.8 92 80.4
Peaxi162Scf00519g00043 Petunia axillaris HOM05D000071 ORTHO05D003524 3.5e-34 148.7 96 70.8
CAN.G1954.5 Capsicum annuum HOM05D000071 ORTHO05D003524 1.1e-32 143.7 94 70.2
PSO782G0869 Papaver somniferum HOM05D000071 ORTHO05D003524 3.2e-19 99.0 140 43.6
CAN.G181.33 Capsicum annuum HOM05D000185 ORTHO05D003524 3.5e-18 95.5 67 74.6
Gohir.A02G068202 Gossypium hirsutum HOM05D000071 ORTHO05D003524 3.5e-18 95.5 102 41.2
Dinv12020 Davidia involucrata HOM05D000071 ORTHO05D003524 1.0e-17 94.0 94 47.9
Thecc.08G140600 Theobroma cacao HOM05D000071 ORTHO05D003524 5.0e-17 91.7 134 37.3
CSS0027137 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D003524 5.6e-16 88.2 93 38.7
PSO339G6068 Papaver somniferum HOM05D000071 ORTHO05D003524 5.6e-16 88.2 141 44.0
CAN.G1433.7 Capsicum annuum HOM05D000071 ORTHO05D003524 1.4e-14 83.6 59 67.8
PSO384G2958 Papaver somniferum HOM05D000071 ORTHO05D003524 2.3e-14 82.8 145 33.1
PSO339G3067 Papaver somniferum HOM05D000071 ORTHO05D003524 4.0e-14 82.0 147 42.9
PSO423G0077 Papaver somniferum HOM05D000071 ORTHO05D003524 8.9e-14 80.9 147 43.5
Lj3A918G41 Lonicera japonica HOM05D000071 ORTHO05D003524 1.5e-13 80.1 80 48.8
CAN.G1433.12 Capsicum annuum HOM05D000071 ORTHO05D003524 5.8e-13 78.2 33 100.0
Manes.15G086501 Manihot esculenta HOM05D000071 ORTHO05D003524 5.8e-13 78.2 92 40.2
PSO407G0119 Papaver somniferum HOM05D000071 ORTHO05D003524 5.8e-13 78.2 101 39.6
CSS0024140 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D003524 1.3e-12 77.0 93 40.9
PSO063G2590 Papaver somniferum HOM05D000071 ORTHO05D003524 1.1e-11 73.9 143 44.1
PSO339G6435 Papaver somniferum HOM05D000071 ORTHO05D003524 3.2e-11 72.4 138 29.7
PSO732G0467 Papaver somniferum HOM05D000071 ORTHO05D003524 3.2e-11 72.4 99 37.4
Dinv12034 Davidia involucrata HOM05D000071 ORTHO05D003524 4.1e-11 72.0 78 44.9
PSO478G2766 Papaver somniferum HOM05D000071 ORTHO05D003524 4.1e-11 72.0 93 40.9
PSO339G0383 Papaver somniferum HOM05D000071 ORTHO05D003524 9.2e-11 70.9 99 39.4
PSO421G0031 Papaver somniferum HOM05D000071 ORTHO05D003524 9.2e-11 70.9 145 37.2
PGR042G1029 Punica granatum HOM05D000071 ORTHO05D003524 9.2e-11 70.9 92 37.0
PSO339G1128 Papaver somniferum HOM05D000071 ORTHO05D003524 1.2e-10 70.5 100 34.0
PSO063G1763 Papaver somniferum HOM05D000071 ORTHO05D003524 1.6e-10 70.1 101 39.6
PSO782G2904 Papaver somniferum HOM05D000071 ORTHO05D003524 1.6e-10 70.1 93 39.8
Medtr2g046780 Medicago truncatula HOM05D000071 ORTHO05D000029 2.1e-10 69.7 133 42.1
PSO832G4561 Papaver somniferum HOM05D000071 ORTHO05D003524 2.1e-10 69.7 96 39.6
FAN09G1237 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.5e-10 68.9 130 43.1
PSO104G0125 Papaver somniferum HOM05D000071 ORTHO05D003524 3.5e-10 68.9 101 33.7
PSO457G0001 Papaver somniferum HOM05D000071 ORTHO05D003524 3.5e-10 68.9 127 42.5
Gohir.D11G300706 Gossypium hirsutum HOM05D000071 ORTHO05D000029 4.6e-10 68.6 136 41.9
PSO339G5281 Papaver somniferum HOM05D000071 ORTHO05D003524 4.6e-10 68.6 105 33.3
PSO423G0044 Papaver somniferum HOM05D000071 ORTHO05D003524 4.6e-10 68.6 102 36.3
PSO421G0155 Papaver somniferum HOM05D000071 ORTHO05D003524 6.0e-10 68.2 97 40.2
PSO423G0132 Papaver somniferum HOM05D000071 ORTHO05D003524 7.8e-10 67.8 99 35.4
PSO421G0638 Papaver somniferum HOM05D000071 ORTHO05D003524 1.0e-09 67.4 101 36.6
PSO423G0082 Papaver somniferum HOM05D000071 ORTHO05D003524 1.0e-09 67.4 103 34.0
PSO541G5158 Papaver somniferum HOM05D000071 ORTHO05D003524 1.0e-09 67.4 101 32.7
PSO421G0275 Papaver somniferum HOM05D000071 ORTHO05D003524 1.3e-09 67.0 100 35.0
PSO339G5923 Papaver somniferum HOM05D000071 ORTHO05D003524 1.7e-09 66.6 101 33.7
PSO423G0131 Papaver somniferum HOM05D000071 ORTHO05D003524 1.7e-09 66.6 107 33.6
PSO063G5150 Papaver somniferum HOM05D000071 ORTHO05D003524 2.3e-09 66.2 102 32.4
PSO384G2684 Papaver somniferum HOM05D000071 ORTHO05D003524 2.3e-09 66.2 100 35.0
Peaxi162Scf00053g00197 Petunia axillaris HOM05D000053 ORTHO05D017487 2.3e-09 66.2 139 41.0
PSO782G2967 Papaver somniferum HOM05D000071 ORTHO05D003524 3.0e-09 65.9 99 34.3
Duzib106G0214 Durio zibethinus HOM05D000071 ORTHO05D000029 3.9e-09 65.5 136 44.9
PSO063G1443 Papaver somniferum HOM05D000071 ORTHO05D003524 3.9e-09 65.5 102 33.3
PSO063G4950 Papaver somniferum HOM05D000071 ORTHO05D003524 3.9e-09 65.5 96 39.6
PSO596G0032 Papaver somniferum HOM05D000071 ORTHO05D003524 3.9e-09 65.5 102 36.3
Duzib106G1041 Durio zibethinus HOM05D000071 ORTHO05D000029 5.1e-09 65.1 140 40.0
PSO339G6635 Papaver somniferum HOM05D000071 ORTHO05D003524 5.1e-09 65.1 103 33.0
PSO421G0381 Papaver somniferum HOM05D000071 ORTHO05D003524 5.1e-09 65.1 93 37.6
PSO210G5374 Papaver somniferum HOM05D000071 ORTHO05D003524 6.6e-09 64.7 99 34.3
PSO339G2161 Papaver somniferum HOM05D000071 ORTHO05D003524 6.6e-09 64.7 96 33.3
Glyma.16G186250 Glycine max HOM05D000071 ORTHO05D000029 1.1e-08 63.9 137 32.1
HanXRQChr07g0205271 Helianthus annuus HOM05D000071 ORTHO05D000029 1.1e-08 63.9 142 31.7
PSO513G0203 Papaver somniferum HOM05D000071 ORTHO05D003524 1.1e-08 63.9 102 33.3
PSO566G0174 Papaver somniferum HOM05D000071 ORTHO05D003524 1.1e-08 63.9 101 32.7
PSO104G0206 Papaver somniferum HOM05D000071 ORTHO05D003524 1.5e-08 63.5 101 32.7
PSO339G2567 Papaver somniferum HOM05D000071 ORTHO05D003524 1.5e-08 63.5 99 32.3
PSO832G4229 Papaver somniferum HOM05D000071 ORTHO05D003524 1.5e-08 63.5 100 37.0
PSO339G0535 Papaver somniferum HOM05D000071 ORTHO05D003524 1.9e-08 63.2 94 35.1
PSO339G4611 Papaver somniferum HOM05D000071 ORTHO05D003524 1.9e-08 63.2 95 36.8
Sed0008361 Sechium edule HOM05D000071 ORTHO05D000029 1.9e-08 63.2 144 32.6
PSO017G6809 Papaver somniferum HOM05D000071 ORTHO05D003524 2.5e-08 62.8 100 34.0
PSO421G0516 Papaver somniferum HOM05D000071 ORTHO05D003524 2.5e-08 62.8 101 36.6
TPR.G29245 Trifolium pratense HOM05D000071 ORTHO05D000029 2.5e-08 62.8 134 32.1
PSO104G0094 Papaver somniferum HOM05D000071 ORTHO05D003524 3.3e-08 62.4 97 34.0
PSO339G6059 Papaver somniferum HOM05D000071 ORTHO05D003524 3.3e-08 62.4 103 31.1
PSO421G0371 Papaver somniferum HOM05D000071 ORTHO05D003524 3.3e-08 62.4 100 33.0
PSO513G0018 Papaver somniferum HOM05D000071 ORTHO05D003524 3.3e-08 62.4 99 33.3
PSO541G0776 Papaver somniferum HOM05D000071 ORTHO05D003524 3.3e-08 62.4 101 34.7
PSO832G3553 Papaver somniferum HOM05D000071 ORTHO05D003524 3.3e-08 62.4 105 39.0
arahy.Tifrunner.gnm1.ann1.FT8TT0 Arachis hypogaea HOM05D000071 ORTHO05D000029 4.3e-08 62.0 127 38.6
DCAR_003858 Daucus carota HOM05D000071 ORTHO05D003524 4.3e-08 62.0 94 34.0
PSO104G0216 Papaver somniferum HOM05D000071 ORTHO05D003524 4.3e-08 62.0 98 36.7
PSO339G4999 Papaver somniferum HOM05D000071 ORTHO05D003524 4.3e-08 62.0 103 31.1
PSO675G2331 Papaver somniferum HOM05D000071 ORTHO05D003524 5.6e-08 61.6 98 31.6
PSO339G6165 Papaver somniferum HOM05D000071 ORTHO05D003524 7.3e-08 61.2 93 34.4
RhsimUnG0134000 Rhododendron simsii HOM05D008944 ORTHO05D012715 7.3e-08 61.2 141 32.6
PSO325G0015 Papaver somniferum HOM05D000071 ORTHO05D003524 9.5e-08 60.8 97 36.1
QL08p008585 Quercus lobata HOM05D000053 ORTHO05D000035 9.5e-08 60.8 73 63.0
PSO104G0035 Papaver somniferum HOM05D000071 ORTHO05D003524 1.2e-07 60.5 91 31.9
RhsimUnG0143600 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.2e-07 60.5 141 32.6
PSO063G4317 Papaver somniferum HOM05D000071 ORTHO05D003524 1.6e-07 60.1 89 37.1
RcHm_v2.0_Chr5g0039781 Rosa chinensis HOM05D000053 ORTHO05D000448 1.6e-07 60.1 138 39.9
Gorai.005G083800 Gossypium raimondii HOM05D000071 ORTHO05D003524 2.8e-07 59.3 49 51.0
MBI11_g13132_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D003524 2.8e-07 59.3 92 35.9
PSO063G7443 Papaver somniferum HOM05D000071 ORTHO05D003524 2.8e-07 59.3 105 30.5
PSO339G2230 Papaver somniferum HOM05D000071 ORTHO05D003524 2.8e-07 59.3 98 31.6
PSO782G1313 Papaver somniferum HOM05D000132 ORTHO05D000058 2.8e-07 59.3 142 31.0
Atru.chr5.2917 Acer truncatum HOM05D000071 ORTHO05D000029 3.6e-07 58.9 138 39.9
Gohir.1Z050031 Gossypium hirsutum HOM05D000071 ORTHO05D003524 3.6e-07 58.9 49 51.0
PSO421G0702 Papaver somniferum HOM05D000132 ORTHO05D000058 3.6e-07 58.9 144 31.2
PSO423G0259 Papaver somniferum HOM05D000071 ORTHO05D003524 3.6e-07 58.9 105 37.1
Gohir.D02G074400 Gossypium hirsutum HOM05D000071 ORTHO05D003524 4.7e-07 58.5 65 41.5
PSO063G1083 Papaver somniferum HOM05D000071 ORTHO05D003524 4.7e-07 58.5 100 34.0
PSO423G0214 Papaver somniferum HOM05D000071 ORTHO05D003524 4.7e-07 58.5 93 33.3
CAN.G1433.13 Capsicum annuum HOM05D000071 ORTHO05D003524 6.2e-07 58.2 28 82.1
DCAR_012607 Daucus carota HOM05D000053 ORTHO05D000035 6.2e-07 58.2 130 43.1
Lsat_1_v5_gn_8_137921 Lactuca sativa HOM05D000071 ORTHO05D000029 6.2e-07 58.2 96 39.6
Lsat_1_v5_gn_8_140821 Lactuca sativa HOM05D000071 ORTHO05D000029 6.2e-07 58.2 97 39.2
Os12g0155400 Oryza sativa ssp. japonica HOM05D000071 ORTHO05D000029 6.2e-07 58.2 128 32.0
PSO104G0046 Papaver somniferum HOM05D000071 ORTHO05D003524 6.2e-07 58.2 97 35.1
PSO339G2320 Papaver somniferum HOM05D000071 ORTHO05D003524 6.2e-07 58.2 100 35.0
PSO104G0112 Papaver somniferum HOM05D000071 ORTHO05D003524 8.1e-07 57.8 97 30.9
PSO151G0118 Papaver somniferum HOM05D000071 ORTHO05D003524 8.1e-07 57.8 99 33.3
FAN25G1354 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.1e-06 57.4 138 30.4
PSO017G0569 Papaver somniferum HOM05D000132 ORTHO05D000058 1.1e-06 57.4 97 37.1
Peaxi162Scf00983g00032 Petunia axillaris HOM05D000071 ORTHO05D000029 1.1e-06 57.4 142 39.4
RcHm_v2.0_Chr7g0206751 Rosa chinensis HOM05D000071 ORTHO05D000029 1.1e-06 57.4 132 42.4
Duzib120G0002 Durio zibethinus HOM05D000071 ORTHO05D000029 1.8e-06 56.6 140 32.1
Lsat_1_v5_gn_8_132500 Lactuca sativa HOM05D000071 ORTHO05D000029 1.8e-06 56.6 106 36.8
PSO104G0245 Papaver somniferum HOM05D000071 ORTHO05D003524 1.8e-06 56.6 100 31.0
Cfa012621 Carpinus fangiana HOM05D000071 ORTHO05D000029 2.4e-06 56.2 135 34.8
Lsat_1_v5_gn_8_138040 Lactuca sativa HOM05D000071 ORTHO05D000029 2.4e-06 56.2 99 35.4
Lsat_1_v5_gn_0_39741 Lactuca sativa HOM05D000071 ORTHO05D000029 4.0e-06 55.5 98 34.7
Medtr1g101250 Medicago truncatula HOM05D000071 ORTHO05D000029 4.0e-06 55.5 95 40.0
PSO063G3339 Papaver somniferum HOM05D000132 ORTHO05D000058 4.0e-06 55.5 162 37.0
PSO063G3852 Papaver somniferum HOM05D000132 ORTHO05D000058 4.0e-06 55.5 162 37.0
PSO421G0084 Papaver somniferum HOM05D000071 ORTHO05D003524 4.0e-06 55.5 107 34.6
Lsat_1_v5_gn_8_138180 Lactuca sativa HOM05D000071 ORTHO05D000029 6.8e-06 54.7 97 34.0
Lsat_1_v5_gn_8_157381 Lactuca sativa HOM05D000071 ORTHO05D000029 6.8e-06 54.7 101 39.6
PSO017G4910 Papaver somniferum HOM05D000071 ORTHO05D003524 6.8e-06 54.7 95 32.6
PSO151G0060 Papaver somniferum HOM05D000071 ORTHO05D003524 6.8e-06 54.7 98 29.6
PSO513G0166 Papaver somniferum HOM05D000071 ORTHO05D003524 6.8e-06 54.7 99 32.3
TPR.G16575 Trifolium pratense HOM05D000071 ORTHO05D000029 6.8e-06 54.7 94 37.2
TPR.G39360 Trifolium pratense HOM05D000053 ORTHO05D000035 6.8e-06 54.7 105 36.2
Medtr8g040910 Medicago truncatula HOM05D000071 ORTHO05D000029 8.9e-06 54.3 130 43.8
PSO104G0164 Papaver somniferum HOM05D000071 ORTHO05D003524 8.9e-06 54.3 100 36.0


User provided reference genes

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