Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 1.6e-38 162.2 77 100.0
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.5e-28 129.0 71 87.3
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 2.2e-27 125.2 69 87.0
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 6.5e-27 123.6 69 85.5
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 7.1e-26 120.2 65 80.0
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 3.5e-25 117.9 65 76.9
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 4.6e-25 117.5 68 72.1
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 4.6e-25 117.5 68 72.1
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 7.9e-25 116.7 69 79.7
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 7.9e-25 116.7 65 78.5
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 1.0e-24 116.3 63 81.0
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 1.0e-24 116.3 69 78.3
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.8e-24 115.5 65 76.9
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.8e-24 115.5 65 78.5
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.3e-24 115.2 69 79.7
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 3.0e-24 114.8 65 76.9
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 5.1e-24 114.0 69 75.4
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 6.7e-24 113.6 63 77.8
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 6.7e-24 113.6 65 75.4
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 8.7e-24 113.2 65 75.4
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 1.1e-23 112.8 70 71.4
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.5e-23 112.5 65 76.9
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 1.5e-23 112.5 65 76.9
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 2.5e-23 111.7 69 72.5
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.5e-23 111.7 63 76.2
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 2.5e-23 111.7 63 76.2
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.3e-23 111.3 68 67.6
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.3e-23 111.3 68 67.6
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 3.3e-23 111.3 68 67.6
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 4.3e-23 110.9 69 72.5
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 4.3e-23 110.9 65 72.3
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 5.7e-23 110.5 63 76.2
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 5.7e-23 110.5 65 75.4
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 7.4e-23 110.2 62 75.8
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 7.4e-23 110.2 65 72.3
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 9.6e-23 109.8 68 72.1
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.3e-22 109.4 63 73.0
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.6e-22 109.0 63 71.4
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.6e-22 109.0 63 73.0
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 2.1e-22 108.6 62 77.4
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 2.1e-22 108.6 63 73.0
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 2.1e-22 108.6 63 74.6
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 2.8e-22 108.2 64 70.3
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 2.8e-22 108.2 64 70.3
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 2.8e-22 108.2 70 70.0
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 3.7e-22 107.8 63 71.4
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 4.8e-22 107.5 65 70.8
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 6.3e-22 107.1 63 73.0
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 6.3e-22 107.1 65 69.2
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 6.3e-22 107.1 63 71.4
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 6.3e-22 107.1 63 73.0
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 8.2e-22 106.7 82 58.5
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 8.2e-22 106.7 63 69.8
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 8.2e-22 106.7 63 69.8
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 8.2e-22 106.7 63 69.8
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 8.2e-22 106.7 63 69.8
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.1e-21 106.3 63 71.4
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 1.4e-21 105.9 63 69.8
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.4e-21 105.1 63 68.3
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 2.4e-21 105.1 69 69.6
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 3.1e-21 104.8 63 69.8
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 3.1e-21 104.8 63 68.3
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 3.1e-21 104.8 63 68.3
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 4.1e-21 104.4 76 63.2
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 5.3e-21 104.0 63 69.8
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 6.9e-21 103.6 62 69.4
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 9.0e-21 103.2 63 68.3
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 1.5e-20 102.4 68 69.1
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 2.0e-20 102.1 68 63.2
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 2.0e-20 102.1 64 65.6
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 1.0e-19 99.8 63 66.7
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 1.0e-19 99.8 64 64.1
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.3e-19 99.4 63 65.1
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 2.2e-19 98.6 63 66.7
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 2.9e-19 98.2 63 65.1
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 8.5e-19 96.7 58 72.4
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 1.9e-18 95.5 68 60.3
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.9e-18 95.5 65 61.5
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 9.3e-18 93.2 63 63.5
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 2.7e-17 91.7 65 58.5
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 2.7e-17 91.7 65 58.5
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 2.7e-17 91.7 65 58.5
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 2.7e-17 91.7 65 58.5
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 2.7e-17 91.7 65 58.5
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 2.7e-17 91.7 52 73.1
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 4.6e-17 90.9 65 56.9
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 4.6e-17 90.9 63 60.3
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 6.1e-17 90.5 69 53.6
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 6.1e-17 90.5 65 58.5
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 1.0e-16 89.7 71 53.5
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 1.0e-16 89.7 63 58.7
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 1.3e-16 89.4 65 53.8
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 1.8e-16 89.0 52 71.2
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 5.7e-15 84.0 63 58.7
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 9.7e-15 83.2 59 55.9
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 3.4e-12 74.7 45 68.9
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 1.0e-11 73.2 52 55.8
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 1.3e-11 72.8 57 49.1
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.7e-11 72.4 52 59.6
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 2.6e-07 58.5 65 35.4
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 4.4e-07 57.8 31 71.0


User provided reference genes

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