Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1394.12 Capsicum annuum HOM05D002690 ORTHO05D009463 4.4e-127 459.1 233 100.0
Solyc08g007760.3 Solanum lycopersicum HOM05D002690 ORTHO05D009463 7.3e-74 282.3 166 85.5
Sopen08g003690 Solanum pennellii HOM05D002690 ORTHO05D009463 8.1e-73 278.9 166 84.3
Sopen08g003670 Solanum pennellii HOM05D002690 ORTHO05D009463 9.0e-72 275.4 174 80.5
Solyc08g007730.2 Solanum lycopersicum HOM05D002690 ORTHO05D009463 1.5e-71 274.6 174 80.5
Solyc08g007750.4 Solanum lycopersicum HOM05D002690 ORTHO05D009463 9.3e-69 265.4 166 81.9
Sopen08g003680 Solanum pennellii HOM05D002690 ORTHO05D009463 7.9e-68 262.3 166 81.3
Nitab4.5_0001200g0030 Nicotiana tabacum HOM05D002690 ORTHO05D009463 9.6e-66 255.4 167 80.2
Peaxi162Scf00102g01348 Petunia axillaris HOM05D002690 ORTHO05D009463 3.4e-55 220.3 145 77.9
Nitab4.5_0002886g0080 Nicotiana tabacum HOM05D002690 ORTHO05D009463 1.3e-54 218.4 344 44.2
Dinv39040 Davidia involucrata HOM05D002690 ORTHO05D009463 1.1e-32 145.6 164 50.6
CSS0044732 Camellia sinensis var. sinensis HOM05D002690 ORTHO05D009463 3.6e-28 130.6 166 48.2
Actinidia02064 Actinidia chinensis HOM05D002690 ORTHO05D009463 4.7e-28 130.2 165 46.7
QL12p016222 Quercus lobata HOM05D002690 ORTHO05D009463 1.0e-27 129.0 174 44.8
Cfa012062 Carpinus fangiana HOM05D006448 ORTHO05D009463 8.8e-27 125.9 155 49.0
CANSAT21G0112 Cannabis sativa HOM05D002690 ORTHO05D009463 1.1e-26 125.6 167 47.9
CiPaw.12G101300 Carya illinoinensis HOM05D002690 ORTHO05D009463 2.0e-26 124.8 182 45.1
Ciclev10020457m.g Citrus clementina HOM05D002690 ORTHO05D009463 1.3e-25 122.1 171 48.5
Atru.chr9.1493 Acer truncatum HOM05D002690 ORTHO05D009463 3.7e-25 120.6 169 46.2
Migut.A00893 Erythranthe guttata HOM05D002690 ORTHO05D009463 1.4e-24 118.6 163 46.0
Duzib084G0931 Durio zibethinus HOM05D002690 ORTHO05D009463 2.9e-22 110.9 154 46.1
Manes.02G029400 Manihot esculenta HOM05D002690 ORTHO05D009463 6.5e-22 109.8 145 47.6
CiPaw.11G143500 Carya illinoinensis HOM05D002690 ORTHO05D009463 5.5e-21 106.7 180 41.1
CAN.G496.5 Capsicum annuum HOM05D001110 ORTHO05D000942 9.4e-21 105.9 57 91.2
Potri.001G113500 Populus trichocarpa HOM05D002690 ORTHO05D009463 2.7e-20 104.4 170 41.8
PGSC0003DMG400012521 Solanum tuberosum HOM05D002690 ORTHO05D009463 4.7e-20 103.6 59 81.4
Gorai.004G205800 Gossypium raimondii HOM05D002690 ORTHO05D009463 1.4e-19 102.1 171 42.1
Haze_08994 Corylus avellana HOM05D002690 ORTHO05D009463 1.8e-19 101.7 138 45.7
COL.COLO4_23808 Corchorus olitorius HOM05D002690 ORTHO05D009463 5.2e-19 100.1 148 42.6
Prupe.5G086300 Prunus persica HOM05D002690 ORTHO05D009463 8.8e-19 99.4 162 41.4
Oeu040251.1 Olea europaea HOM05D002690 ORTHO05D009463 3.4e-18 97.4 122 48.4
Cc08_g13680 Coffea canephora HOM05D002690 ORTHO05D009463 5.7e-18 96.7 163 41.1
TAR629G2075 Trochodendron aralioides HOM05D002690 ORTHO05D009463 1.8e-16 91.7 175 37.7
PGR031G3842 Punica granatum HOM05D002690 ORTHO05D009463 3.1e-16 90.9 162 37.7
CARHR254320 Cardamine hirsuta HOM05D002690 ORTHO05D009463 1.0e-14 85.9 152 42.1
Eucgr.D01949 Eucalyptus grandis HOM05D002690 ORTHO05D009463 1.3e-14 85.5 143 40.6
Carub.0006s3107 Capsella rubella HOM05D002690 ORTHO05D009463 1.7e-14 85.1 172 38.4
SalBow6G1657 Salvia bowleyana HOM05D002690 ORTHO05D009463 5.0e-14 83.6 135 43.0
Sp6g05540 Schrenkiella parvula HOM05D002690 ORTHO05D009463 2.5e-13 81.3 151 39.7
THA.LOC104814099 Tarenaya hassleriana HOM05D002690 ORTHO05D009463 4.2e-13 80.5 136 45.6
DCAR_000889 Daucus carota HOM05D002690 ORTHO05D009463 1.2e-12 79.0 126 38.1
Cpa.g.sc29.42 Carica papaya HOM05D002690 ORTHO05D009463 2.7e-12 77.8 141 41.8
Gohir.D08G195000 Gossypium hirsutum HOM05D002690 ORTHO05D009463 8.0e-12 76.3 169 36.7
Sabra01G0086700 Salix brachista HOM05D002690 ORTHO05D009463 6.8e-11 73.2 130 38.5
Glyma.01G214100 Glycine max HOM05D002690 ORTHO05D009463 8.8e-11 72.8 165 34.5
Gohir.A08G176300 Gossypium hirsutum HOM05D002690 ORTHO05D009463 8.8e-11 72.8 169 36.1
BcaB05g23778 Brassica carinata HOM05D002690 ORTHO05D009463 2.0e-10 71.6 151 35.1
Sc01g0008950 Simmondsia chinensis HOM05D002690 ORTHO05D009463 2.6e-10 71.2 140 38.6
AL6G46740 Arabidopsis lyrata HOM05D002690 ORTHO05D009463 4.4e-10 70.5 151 36.4
Lalb_Chr16g0389701 Lupinus albus HOM05D002690 ORTHO05D009463 4.4e-10 70.5 168 33.9
HanXRQChr06g0165201 Helianthus annuus HOM05D002690 ORTHO05D009463 1.7e-09 68.6 81 48.1
EL10Ac5g12677 Beta vulgaris HOM05D002690 ORTHO05D009463 2.2e-09 68.2 137 35.0
Thecc.03G266900 Theobroma cacao HOM05D002690 ORTHO05D009463 3.7e-09 67.4 166 34.3
AUR62010554 Chenopodium quinoa HOM05D002690 ORTHO05D009463 4.9e-09 67.0 165 32.1
A02p25950 Brassica napus HOM05D002690 ORTHO05D009463 1.1e-08 65.9 166 34.9
SGA_v2.0_scaffold146G36215 Striga asiatica HOM05D002690 ORTHO05D009463 1.4e-08 65.5 167 34.7
unitig_52.g17228 Utricularia gibba HOM05D002690 ORTHO05D009463 1.4e-08 65.5 160 34.4
Lj2A203T52 Lonicera japonica HOM05D002690 ORTHO05D009463 2.4e-08 64.7 93 41.9
MBI04_g45343_MAGBIO Magnolia biondii HOM05D051042 ORTHO05D009463 3.1e-08 64.3 86 46.5
AT4G11970 Arabidopsis thaliana HOM05D002690 ORTHO05D009463 7.0e-08 63.2 170 32.9
BcaC03g16321 Brassica carinata HOM05D002690 ORTHO05D009463 7.0e-08 63.2 151 33.1
BolC2t10155H Brassica oleracea HOM05D002690 ORTHO05D009463 7.0e-08 63.2 166 33.1
PSO782G0365 Papaver somniferum HOM05D002690 ORTHO05D009463 7.0e-08 63.2 167 31.7
Phvul.002G152600 Phaseolus vulgaris HOM05D002690 ORTHO05D009463 9.2e-08 62.8 157 31.2
Aa31LG9G10500 Aethionema arabicum HOM05D002690 ORTHO05D009463 1.2e-07 62.4 143 37.1
Thhalv10029158m.g Eutrema salsugineum HOM05D002690 ORTHO05D009463 1.2e-07 62.4 130 36.2
Lalb_Chr05g0225491 Lupinus albus HOM05D002690 ORTHO05D009463 1.6e-07 62.0 161 32.3
VMungo1215G2259 Vigna mungo HOM05D002690 ORTHO05D009463 1.6e-07 62.0 142 34.5
GSVIVG01019895001 Vitis vinifera HOM05D002690 ORTHO05D009463 2.0e-07 61.6 76 47.4
Lsat_1_v5_gn_3_4560 Lactuca sativa HOM05D002690 ORTHO05D009463 4.5e-07 60.5 144 35.4
PSO063G4047 Papaver somniferum HOM05D002690 ORTHO05D009463 7.7e-07 59.7 167 29.9
Lj2g0008902 Lotus japonicus HOM05D002690 ORTHO05D009463 1.0e-06 59.3 183 32.8


User provided reference genes

Program Settings