Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1361.14 Capsicum annuum HOM05D000443 ORTHO05D013829 5.1e-139 497.7 239 100.0
CAN.G1076.42 Capsicum annuum HOM05D000443 ORTHO05D001278 5.0e-62 241.9 141 86.5
Nitab4.5_0003838g0090 Nicotiana tabacum HOM05D000443 ORTHO05D009381 1.3e-38 164.1 152 64.5
Solyc01g100810.3 Solanum lycopersicum HOM05D000443 ORTHO05D001278 5.6e-37 158.7 150 66.0
PGSC0003DMG400002756 Solanum tuberosum HOM05D000443 ORTHO05D001278 5.6e-37 158.7 130 71.5
Nitab4.5_0003044g0040 Nicotiana tabacum HOM05D000443 ORTHO05D001278 4.6e-31 139.0 152 59.2
Peaxi162Scf00357g00729 Petunia axillaris HOM05D000443 ORTHO05D001278 3.1e-27 126.3 128 62.5
Rhsim05G0129100 Rhododendron simsii HOM05D000443 ORTHO05D001278 6.0e-23 112.1 146 50.0
CSS0017600 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D000362 1.5e-21 107.5 126 54.0
Dinv24479 Davidia involucrata HOM05D000443 ORTHO05D001278 3.3e-21 106.3 139 48.9
Manes.09G178700 Manihot esculenta HOM05D000443 ORTHO05D001278 2.1e-20 103.6 150 48.7
Actinidia16879 Actinidia chinensis HOM05D000443 ORTHO05D001278 8.2e-20 101.7 135 48.9
Cpa.g.sc48.185 Carica papaya HOM05D000443 ORTHO05D001278 1.4e-19 100.9 138 47.1
Cc02_g35310 Coffea canephora HOM05D000443 ORTHO05D001278 3.1e-19 99.8 153 47.1
Actinidia01497 Actinidia chinensis HOM05D000443 ORTHO05D001278 4.0e-19 99.4 155 44.5
CAN.G783.4 Capsicum annuum HOM05D011894 ORTHO05D013829 5.8e-18 95.5 59 78.0
COL.COLO4_05524 Corchorus olitorius HOM05D000443 ORTHO05D001278 1.3e-17 94.4 141 46.8
FAN02G3165 Fragaria x ananassa HOM05D000443 ORTHO05D001278 1.3e-17 94.4 170 41.8
Sopen01g044310 Solanum pennellii HOM05D000443 ORTHO05D001278 1.7e-17 94.0 96 65.6
FAN05G1487 Fragaria x ananassa HOM05D000443 ORTHO05D001278 2.2e-17 93.6 170 41.8
FAN09G1483 Fragaria x ananassa HOM05D000443 ORTHO05D001278 2.2e-17 93.6 170 41.8
FvH4_6g07880 Fragaria vesca HOM05D000443 ORTHO05D001278 2.9e-17 93.2 180 40.6
CAN.G525.66 Capsicum annuum HOM05D000021 ORTHO05D000010 6.5e-17 92.0 59 74.6
FAN14G3393 Fragaria x ananassa HOM05D000443 ORTHO05D001278 1.9e-16 90.5 179 40.8
Potri.005G010800 Populus trichocarpa HOM05D000443 ORTHO05D001278 5.5e-16 89.0 137 44.5
MSTRG.5151 Avicennia marina HOM05D000443 ORTHO05D001278 1.2e-15 87.8 141 47.5
GSVIVG01031267001 Vitis vinifera HOM05D000443 ORTHO05D001278 1.2e-15 87.8 168 36.9
Sabra13G0005600 Salix brachista HOM05D000443 ORTHO05D009381 1.6e-15 87.4 137 46.7
MELO3C004170.2 Cucumis melo HOM05D000443 ORTHO05D001278 2.7e-15 86.7 153 40.5
Manes.08G109700 Manihot esculenta HOM05D000443 ORTHO05D001278 3.5e-15 86.3 132 44.7
RcHm_v2.0_Chr3g0457581 Rosa chinensis HOM05D000443 ORTHO05D001278 3.5e-15 86.3 143 41.3
Lj5A325G67 Lonicera japonica HOM05D000443 ORTHO05D001278 4.6e-15 85.9 129 46.5
MD04G1191300 Malus domestica HOM05D000443 ORTHO05D001278 6.0e-15 85.5 144 44.4
Sabra05G0019200 Salix brachista HOM05D000443 ORTHO05D001278 6.0e-15 85.5 156 39.1
Rhsim11G0098300 Rhododendron simsii HOM05D000443 ORTHO05D001278 1.0e-14 84.7 114 47.4
vmacro01584 Vaccinium macrocarpon HOM05D000443 ORTHO05D001278 1.3e-14 84.3 144 42.4
Ciclev10000500m.g Citrus clementina HOM05D000443 ORTHO05D001278 1.8e-14 84.0 131 45.0
Potri.013G006600 Populus trichocarpa HOM05D000443 ORTHO05D001278 1.8e-14 84.0 137 43.1
Prupe.6G309800 Prunus persica HOM05D000443 ORTHO05D001278 1.1e-13 81.3 144 43.1
Thecc.05G325700 Theobroma cacao HOM05D000443 ORTHO05D001278 1.1e-13 81.3 125 46.4
TAR365G0826 Trochodendron aralioides HOM05D000443 ORTHO05D001278 1.1e-13 81.3 138 44.2
ClCG02G014770 Citrullus lanatus HOM05D000443 ORTHO05D001278 1.9e-13 80.5 139 41.7
Rhsim02G0001900 Rhododendron simsii HOM05D000443 ORTHO05D001278 3.3e-13 79.7 165 35.2
CiPaw.01G133700 Carya illinoinensis HOM05D000443 ORTHO05D001278 5.7e-13 79.0 131 43.5
PGR031G2105 Punica granatum HOM05D000443 ORTHO05D001278 7.4e-13 78.6 115 48.7
TAR362G0824 Trochodendron aralioides HOM05D000443 ORTHO05D001278 7.4e-13 78.6 128 43.0
Sed0009598 Sechium edule HOM05D000443 ORTHO05D001278 9.7e-13 78.2 153 40.5
Haze_04045 Corylus avellana HOM05D000443 ORTHO05D001278 1.3e-12 77.8 125 44.0
CiPaw.07G031500 Carya illinoinensis HOM05D000443 ORTHO05D001278 1.6e-12 77.4 135 42.2
Duzib177G0933 Durio zibethinus HOM05D000443 ORTHO05D001278 1.6e-12 77.4 116 48.3
vmacro15166 Vaccinium macrocarpon HOM05D000443 ORTHO05D001278 2.2e-12 77.0 151 35.8
CSS0025299 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D001278 2.8e-12 76.6 146 38.4
TWI36G1073 Tripterygium wilfordii HOM05D000443 ORTHO05D001278 2.8e-12 76.6 110 48.2
Lj3A835T51 Lonicera japonica HOM05D000443 ORTHO05D001278 8.2e-12 75.1 119 43.7
Cfa006716 Carpinus fangiana HOM05D000443 ORTHO05D001278 1.1e-11 74.7 125 42.4
CANSAT54G1582 Cannabis sativa HOM05D000443 ORTHO05D001278 9.0e-11 71.6 161 39.1
Haze_00835 Corylus avellana HOM05D000443 ORTHO05D001278 2.0e-10 70.5 98 49.0
MBI18_g27384_MAGBIO Magnolia biondii HOM05D000443 ORTHO05D001278 2.6e-10 70.1 131 40.5
CSS0022893 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D001278 3.4e-10 69.7 154 37.0
GSVIVG01034944001 Vitis vinifera HOM05D000443 ORTHO05D001278 3.4e-10 69.7 161 35.4
EL10Ac4g09501 Beta vulgaris HOM05D000443 ORTHO05D001278 4.5e-10 69.3 121 40.5
Haze_00838 Corylus avellana HOM05D000443 ORTHO05D001278 7.7e-10 68.6 100 50.0
Migut.N00949 Erythranthe guttata HOM05D000443 ORTHO05D001278 7.7e-10 68.6 131 42.0
Atru.chr2.237 Acer truncatum HOM05D000443 ORTHO05D001278 1.0e-09 68.2 137 40.1
vmacro19779 Vaccinium macrocarpon HOM05D000443 ORTHO05D001278 1.0e-09 68.2 82 54.9
Sed0005862 Sechium edule HOM05D000443 ORTHO05D001278 1.7e-09 67.4 142 39.4
Actinidia02511 Actinidia chinensis HOM05D000443 ORTHO05D001278 2.2e-09 67.0 126 42.1
CsaV3_2G007220 Cucumis sativus L. HOM05D000443 ORTHO05D001278 2.9e-09 66.6 104 46.2
Eucgr.H03308 Eucalyptus grandis HOM05D000443 ORTHO05D001278 2.9e-09 66.6 122 39.3
Cfa015686 Carpinus fangiana HOM05D000443 ORTHO05D001278 5.0e-09 65.9 116 43.1
Sabra05G0008000 Salix brachista HOM05D000443 ORTHO05D009381 6.5e-09 65.5 119 41.2
Dinv30913 Davidia involucrata HOM05D000443 ORTHO05D001278 1.1e-08 64.7 169 33.1
Thecc.04G307100 Theobroma cacao HOM05D000443 ORTHO05D001278 1.1e-08 64.7 94 48.9
Hma1.2p1_0008F-1.1_g005410 Hydrangea macrophylla HOM05D000443 ORTHO05D001278 1.4e-08 64.3 52 71.2
Nn4g25458 Nelumbo nucifera HOM05D000443 ORTHO05D001278 1.4e-08 64.3 124 37.9
Prupe.1G111800 Prunus persica HOM05D000443 ORTHO05D001278 1.4e-08 64.3 132 42.4
Hma1.2p1_0052F.1_g030640 Hydrangea macrophylla HOM05D000443 ORTHO05D001278 1.9e-08 63.9 74 55.4
PGR031G0212 Punica granatum HOM05D000443 ORTHO05D001278 1.9e-08 63.9 162 35.8
Gohir.D13G182800 Gossypium hirsutum HOM05D000443 ORTHO05D001278 2.5e-08 63.5 124 40.3
Gohir.A13G176400 Gossypium hirsutum HOM05D000443 ORTHO05D001278 3.2e-08 63.2 111 42.3
Gorai.013G208200 Gossypium raimondii HOM05D000443 ORTHO05D001278 3.2e-08 63.2 124 40.3
Ciclev10004474m.g Citrus clementina HOM05D000443 ORTHO05D001278 9.4e-08 61.6 147 32.0
Eucgr.B03984 Eucalyptus grandis HOM05D000443 ORTHO05D001278 9.4e-08 61.6 138 39.9
Peaxi162Scf00228g00913 Petunia axillaris HOM05D000443 ORTHO05D001278 9.4e-08 61.6 140 32.9
Sc06g0005700 Simmondsia chinensis HOM05D000443 ORTHO05D001278 1.6e-07 60.8 122 41.0
TWI53G1944 Tripterygium wilfordii HOM05D000443 ORTHO05D001278 1.6e-07 60.8 105 42.9
Duzib212G0324 Durio zibethinus HOM05D000443 ORTHO05D001278 2.7e-07 60.1 102 46.1
Sabra08G0076800 Salix brachista HOM05D000443 ORTHO05D001278 2.7e-07 60.1 162 32.1
DCAR_002523 Daucus carota HOM05D000443 ORTHO05D001278 3.6e-07 59.7 170 34.7
Manes.03G208400 Manihot esculenta HOM05D000443 ORTHO05D001278 3.6e-07 59.7 120 38.3
RcHm_v2.0_Chr4g0426171 Rosa chinensis HOM05D000443 ORTHO05D001278 4.6e-07 59.3 93 45.2
unitig_52.g17272 Utricularia gibba HOM05D000443 ORTHO05D001278 6.1e-07 58.9 118 39.0
SalBow5G0199 Salvia bowleyana HOM05D000443 ORTHO05D001278 7.9e-07 58.5 149 32.2
Actinidia14245 Actinidia chinensis HOM05D000443 ORTHO05D001278 1.0e-06 58.2 129 39.5
TPR.G2599 Trifolium pratense HOM05D000443 ORTHO05D001278 1.4e-06 57.8 122 36.9
Gorai.011G203600 Gossypium raimondii HOM05D000443 ORTHO05D001278 1.8e-06 57.4 94 48.9
AUR62000426 Chenopodium quinoa HOM05D000443 ORTHO05D001278 2.3e-06 57.0 100 42.0
Glyma.20G095200 Glycine max HOM05D000443 ORTHO05D001278 2.3e-06 57.0 52 57.7
CAN.G963.9 Capsicum annuum HOM05D000009 ORTHO05D000008 3.0e-06 56.6 45 57.8
AUR62006772 Chenopodium quinoa HOM05D000443 ORTHO05D001278 3.0e-06 56.6 117 37.6
Gohir.A10G175300 Gossypium hirsutum HOM05D000443 ORTHO05D001278 3.0e-06 56.6 72 56.9
Hma1.2p1_1096F.1_g256610 Hydrangea macrophylla HOM05D000443 ORTHO05D001278 3.0e-06 56.6 144 38.2
Lsat_1_v5_gn_6_70500 Lactuca sativa HOM05D000443 ORTHO05D001278 3.0e-06 56.6 177 31.6
Cpa.g.sc9.1 Carica papaya HOM05D000443 ORTHO05D001278 3.9e-06 56.2 86 44.2
PSO210G5209 Papaver somniferum HOM05D000443 ORTHO05D001278 3.9e-06 56.2 149 32.9
Potri.008G101500 Populus trichocarpa HOM05D000443 ORTHO05D001278 3.9e-06 56.2 137 35.8
Lalb_Chr04g0260381 Lupinus albus HOM05D000443 ORTHO05D001278 5.1e-06 55.8 123 39.8
QL03p016884 Quercus lobata HOM05D000443 ORTHO05D001278 5.1e-06 55.8 114 39.5
Aqoxy2G02633 Aquilegia oxysepala HOM05D000443 ORTHO05D001278 6.7e-06 55.5 148 36.5
Ca_10186_v3 Cicer arietinum L. HOM05D000443 ORTHO05D009381 6.7e-06 55.5 119 40.3
TWI09G0678 Tripterygium wilfordii HOM05D000443 ORTHO05D001278 6.7e-06 55.5 93 43.0
Gohir.D10G182000 Gossypium hirsutum HOM05D000443 ORTHO05D001278 8.8e-06 55.1 94 46.8
Phvul.007G203100 Phaseolus vulgaris HOM05D000443 ORTHO05D001278 8.8e-06 55.1 132 38.6


User provided reference genes

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