Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 3.0e-139 498.4 238 100.0
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.6e-103 379.0 238 76.9
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 2.4e-96 355.9 227 74.0
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.5e-77 293.5 208 71.6
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 4.1e-72 275.4 167 80.2
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 1.1e-64 250.8 213 54.5
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 1.8e-64 250.0 231 52.4
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 3.1e-64 249.2 213 54.5
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 2.3e-62 243.0 224 50.4
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.9e-62 242.7 224 50.0
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 3.8e-62 242.3 238 49.6
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.8e-62 242.3 219 51.1
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.1e-61 240.7 219 51.1
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 3.3e-61 239.2 213 51.6
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 4.3e-61 238.8 232 50.0
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 9.5e-61 237.7 219 51.1
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.1e-60 236.5 219 52.1
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 2.1e-60 236.5 223 51.1
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 2.8e-60 236.1 231 50.6
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 3.6e-60 235.7 221 49.8
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 6.1e-60 235.0 218 52.8
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 3.1e-59 232.6 231 49.8
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 3.1e-59 232.6 218 50.9
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 4.0e-59 232.3 218 50.9
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 4.0e-59 232.3 211 52.1
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.2e-59 231.9 224 48.7
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 6.8e-59 231.5 221 51.1
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.2e-58 230.7 212 53.8
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 2.0e-58 229.9 216 50.0
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.6e-58 229.6 221 50.7
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 3.4e-58 229.2 219 50.2
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 4.4e-58 228.8 213 49.8
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 5.8e-58 228.4 219 51.6
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 7.5e-58 228.0 218 50.9
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.2e-57 226.5 218 50.9
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 3.7e-57 225.7 224 49.6
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 4.9e-57 225.3 239 49.0
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 6.4e-57 224.9 238 48.7
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.4e-56 223.0 235 47.7
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 2.4e-56 223.0 224 50.0
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 2.4e-56 223.0 216 50.0
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 3.2e-56 222.6 217 49.3
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 4.1e-56 222.2 217 48.8
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 4.1e-56 222.2 192 53.6
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 4.1e-56 222.2 217 48.4
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 7.0e-56 221.5 213 50.2
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.2e-55 220.7 224 47.8
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 1.2e-55 220.7 222 49.5
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.6e-55 220.3 239 49.0
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 2.0e-55 219.9 216 50.5
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 2.0e-55 219.9 216 48.6
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 2.0e-55 219.9 212 49.5
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 3.5e-55 219.2 212 50.0
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 4.6e-55 218.8 239 46.4
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.7e-54 216.9 215 47.0
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 2.3e-54 216.5 214 51.4
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 3.0e-54 216.1 223 49.3
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 5.0e-54 215.3 245 47.3
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 6.6e-54 214.9 214 50.5
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 8.6e-54 214.5 226 48.2
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.1e-53 214.2 222 48.6
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 1.5e-53 213.8 214 49.1
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.5e-53 213.8 222 48.2
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 2.5e-53 213.0 205 50.7
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 4.3e-53 212.2 219 48.9
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 4.3e-53 212.2 214 48.6
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 5.6e-53 211.8 212 49.1
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 9.5e-53 211.1 222 47.7
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.6e-52 210.3 216 49.1
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.1e-52 209.9 216 46.8
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 3.6e-52 209.1 212 47.2
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 4.7e-52 208.8 235 46.4
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.4e-51 207.2 216 45.4
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.8e-51 206.8 212 48.6
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 2.3e-51 206.5 216 45.4
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 2.3e-51 206.5 216 48.6
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 3.1e-51 206.1 229 46.7
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 3.1e-51 206.1 214 47.7
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 4.0e-51 205.7 216 45.4
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 6.8e-51 204.9 216 46.3
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.2e-50 204.1 216 45.4
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.0e-50 203.4 226 46.5
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 2.0e-50 203.4 238 45.0
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.3e-49 200.7 223 43.9
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 3.7e-49 199.1 223 43.5
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 3.7e-49 199.1 223 43.5
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 3.7e-49 199.1 223 43.5
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 3.7e-49 199.1 223 43.5
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.1e-48 197.6 284 38.0
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.4e-48 197.2 223 43.0
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 3.2e-48 196.1 213 45.5
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 9.2e-48 194.5 232 42.7
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 2.1e-47 193.4 212 44.8
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.7e-46 190.3 180 50.0
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 3.9e-46 189.1 235 43.8
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 2.1e-44 183.3 236 42.8
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 2.8e-44 183.0 245 40.4
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 4.0e-43 179.1 209 41.6
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 7.5e-42 174.9 223 40.4
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 7.5e-42 174.9 209 40.7
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 6.4e-41 171.8 178 50.0
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 4.1e-40 169.1 223 40.8
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 4.6e-39 165.6 178 47.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.3e-38 164.1 159 50.3
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 2.3e-38 163.3 212 42.9
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 5.1e-38 162.2 178 46.6
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.2e-36 157.5 177 41.8
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.6e-34 149.8 240 35.8
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 2.9e-33 146.4 214 33.2
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 2.1e-31 140.2 214 36.9
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.3e-30 137.5 214 35.5
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 3.9e-30 136.0 207 38.2
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 5.1e-30 135.6 133 48.1
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.9e-29 133.7 159 43.4
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.3e-29 132.9 161 41.6
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 1.4e-27 127.5 188 36.7
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.6e-23 114.0 115 47.8
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.2e-15 87.8 89 47.2
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.6e-15 87.4 217 28.1
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 1.3e-14 84.3 91 50.5
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 6.2e-12 75.5 102 38.2
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 2.9e-09 66.6 95 41.1
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 2.7e-07 60.1 50 60.0
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 3.0e-06 56.6 59 40.7


User provided reference genes

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