Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 1.0e-207 726.5 365 100.0
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 5.3e-180 634.4 359 88.6
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 5.0e-178 627.9 359 87.5
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 4.2e-177 624.8 359 87.2
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.6e-174 615.5 374 85.0
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.3e-173 613.2 366 86.3
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 5.6e-129 464.9 373 67.6
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 3.5e-123 445.7 368 63.3
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 3.3e-121 439.1 372 62.4
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 3.3e-121 439.1 368 62.5
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 7.3e-121 438.0 375 60.5
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 7.3e-121 438.0 355 64.8
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.6e-120 436.8 368 62.8
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.8e-120 436.0 368 61.4
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.8e-120 436.0 368 61.4
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.4e-119 433.7 285 76.8
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.1e-119 432.6 376 62.8
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 5.3e-119 431.8 365 63.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-118 430.3 385 61.8
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.5e-118 430.3 384 59.9
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.6e-118 429.5 375 61.3
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.3e-117 427.2 375 60.0
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.9e-117 426.0 362 61.6
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 3.8e-117 425.6 367 60.8
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 6.4e-117 424.9 378 58.7
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 8.4e-117 424.5 373 60.6
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.4e-116 423.7 360 61.9
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 2.4e-116 422.9 377 58.6
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 2.4e-116 422.9 376 61.2
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 7.1e-116 421.4 368 60.3
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 7.1e-116 421.4 352 63.9
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 7.1e-116 421.4 368 61.7
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 7.1e-116 421.4 372 61.3
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.6e-115 420.2 352 62.2
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 7.9e-115 417.9 367 60.8
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.0e-114 417.5 399 56.9
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.0e-114 417.5 375 58.9
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.3e-114 417.2 375 59.7
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.7e-114 416.8 355 62.3
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.9e-113 413.3 372 59.1
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.9e-113 413.3 371 58.5
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.9e-113 413.3 390 57.2
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 5.6e-113 411.8 355 60.6
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.1e-112 409.8 360 60.0
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.8e-112 409.5 369 57.5
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 8.1e-112 407.9 366 59.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.1e-111 407.5 380 58.2
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 2.4e-111 406.4 435 54.3
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 9.0e-111 404.4 374 57.2
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 4.5e-110 402.1 388 57.7
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.8e-110 401.7 356 57.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 9.9e-110 401.0 375 57.3
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.2e-109 399.8 332 62.0
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 2.9e-109 399.4 303 67.3
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 3.8e-109 399.1 375 56.5
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 6.4e-109 398.3 367 57.5
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 8.4e-109 397.9 350 59.1
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.1e-108 397.5 367 58.3
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.1e-108 397.5 377 57.3
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 5.4e-108 395.2 366 57.7
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 7.1e-108 394.8 350 58.9
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.2e-107 394.0 363 57.0
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.1e-107 393.3 350 58.9
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 2.7e-107 392.9 368 55.4
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.6e-107 392.1 366 56.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 4.6e-107 392.1 321 62.0
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.3e-106 390.6 362 57.5
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.8e-106 390.2 346 59.8
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.1e-105 387.5 362 56.4
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.5e-105 387.1 319 62.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.5e-105 387.1 350 57.4
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 2.5e-105 386.3 329 60.2
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 5.6e-105 385.2 329 59.9
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 5.6e-105 385.2 367 53.7
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 5.6e-105 385.2 339 59.0
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 9.6e-105 384.4 329 59.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 2.1e-104 383.3 338 59.2
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 2.8e-104 382.9 373 55.2
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 3.7e-104 382.5 346 57.2
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.4e-103 379.8 362 56.6
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 6.9e-103 378.3 384 56.2
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 9.0e-103 377.9 382 56.8
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.0e-102 376.7 350 56.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.2e-99 367.5 290 63.4
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 3.5e-99 365.9 288 65.3
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 7.9e-99 364.8 274 68.2
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 6.9e-95 351.7 346 58.1
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 2.6e-94 349.7 271 63.8
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 8.4e-93 344.7 359 54.9
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 2.1e-91 340.1 264 65.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.0e-90 337.8 375 53.1
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 6.7e-90 335.1 243 69.1
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.4e-87 326.6 396 46.2
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.4e-86 322.8 348 51.7
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 4.5e-86 322.4 242 68.6
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 5.9e-86 322.0 342 52.3
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.4e-84 317.4 315 53.7
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 3.2e-84 316.2 317 54.3
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.7e-83 313.2 256 64.1
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.7e-83 313.2 275 56.7
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.6e-83 312.8 181 79.6
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.3e-77 294.3 362 48.1
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.7e-77 293.9 167 79.6
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.3e-73 279.6 295 49.5
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 4.4e-73 279.3 321 46.4
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 5.7e-73 278.9 301 52.5
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 3.1e-55 219.9 227 50.7
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.4e-47 194.5 207 53.6
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.3e-44 183.3 113 70.8
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 3.6e-43 179.9 327 36.7
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 5.4e-39 166.0 250 44.0
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 8.6e-37 158.7 140 56.4
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.1e-35 154.1 194 44.8
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.2e-31 140.2 184 42.9
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.5e-25 121.3 71 80.3
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 5.6e-12 76.3 63 55.6
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.8e-10 71.2 100 44.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 6.8e-10 69.3 50 58.0


User provided reference genes

Program Settings