Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.1e-52 208.8 104 100.0
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 1.9e-37 159.1 103 74.8
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 3.2e-37 158.3 103 77.7
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 1.6e-36 156.0 103 77.7
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 6.0e-36 154.1 103 76.7
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-35 152.9 103 72.8
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-34 149.8 103 71.8
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 1.5e-34 149.4 103 73.8
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 7.4e-34 147.1 103 70.9
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-33 146.4 101 73.3
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 1.2e-31 139.8 103 69.9
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 3.4e-31 138.3 101 70.3
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.9e-29 132.5 100 64.0
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.0e-27 125.2 100 60.0
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.5e-26 122.1 100 60.0
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.3e-26 121.7 99 60.6
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 5.7e-26 120.9 100 57.0
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 9.6e-26 120.2 100 58.0
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.2e-25 117.1 100 58.0
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 3.1e-24 115.2 100 56.0
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 5.3e-24 114.4 100 56.0
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 9.0e-24 113.6 79 70.9
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.5e-23 112.8 87 63.2
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.8e-22 108.2 99 54.5
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 5.0e-22 107.8 101 57.4
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 1.4e-21 106.3 100 53.0
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.2e-21 104.8 89 57.3
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 5.1e-19 97.8 100 52.0
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 2.5e-18 95.5 102 49.0
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.7e-18 94.4 90 54.4
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 5.7e-18 94.4 74 62.2
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-18 94.0 91 52.7
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 9.7e-18 93.6 85 50.6
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-17 93.2 89 53.9
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-17 93.2 86 52.3
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-17 92.4 89 52.8
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-17 91.7 85 54.1
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.7e-17 91.7 102 49.0
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.7e-17 91.7 90 52.2
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.8e-17 91.3 86 51.2
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.3e-17 90.9 91 51.6
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-17 90.5 85 52.9
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.2e-17 90.5 83 55.4
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-17 90.5 91 51.6
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.8e-16 89.4 100 44.0
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.1e-16 88.2 69 58.0
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.0e-16 87.0 90 51.1
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.0e-15 85.9 94 45.7
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-15 84.7 100 47.0
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.5e-15 84.7 85 50.6
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-14 83.6 83 51.8
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-14 83.6 91 49.5
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.8e-14 81.6 100 44.0
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-13 79.3 85 45.9
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-13 78.6 85 48.2
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-13 78.6 89 48.3
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.2e-13 77.4 85 48.2
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.7e-12 75.5 82 47.6
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 2.7e-12 75.5 58 56.9
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 6.1e-12 74.3 100 42.0
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 7.9e-12 73.9 57 61.4
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.0e-11 73.6 104 42.3
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.4e-11 73.2 83 48.2
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-11 71.6 73 49.3
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 3.9e-11 71.6 104 41.3
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 1.5e-10 69.7 104 41.3
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.5e-10 68.9 85 41.2
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 3.3e-10 68.6 104 39.4
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.3e-10 68.6 82 45.1
PGSC0003DMG400045522 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.3e-10 68.6 95 45.3
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.4e-10 67.4 68 48.5
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-09 63.9 96 39.6
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 8.2e-09 63.9 102 38.2
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.1e-08 63.5 77 41.6
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.4e-08 62.4 66 48.5
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-08 62.0 68 45.6
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 4.1e-08 61.6 94 38.3
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 5.3e-08 61.2 77 40.3
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 2.0e-07 59.3 94 37.2
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.0e-07 59.3 88 35.2
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.7e-07 57.4 82 42.7
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-06 57.0 65 44.6
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-06 56.6 85 38.8


User provided reference genes

Program Settings