Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.2e-89 333.2 175 100.0
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.1e-82 310.1 179 91.6
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.1e-82 310.1 179 91.6
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.4e-82 309.7 179 91.1
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.9e-80 301.6 179 87.7
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.3e-79 298.5 179 86.0
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.4e-72 276.6 180 81.7
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.3e-70 270.0 171 81.3
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 8.2e-70 267.3 175 79.4
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 8.2e-70 267.3 181 79.6
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.8e-69 266.2 162 85.2
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 4.1e-69 265.0 177 80.2
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 7.0e-69 264.2 176 79.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.2e-68 263.5 164 81.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.5e-68 261.9 154 85.7
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 7.7e-68 260.8 173 76.9
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 7.7e-68 260.8 154 83.8
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.3e-67 260.0 176 78.4
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.2e-67 259.2 175 79.4
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 3.8e-67 258.5 161 82.0
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 5.0e-67 258.1 177 76.8
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 6.5e-67 257.7 177 77.4
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 6.5e-67 257.7 173 74.0
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 6.5e-67 257.7 175 73.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 8.5e-67 257.3 176 78.4
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.1e-66 256.9 178 77.0
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.1e-66 256.9 177 74.6
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.5e-66 256.5 175 77.7
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.5e-66 256.5 176 75.6
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.9e-66 256.1 177 75.7
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.5e-66 255.8 173 75.7
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 2.5e-66 255.8 179 76.5
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 3.2e-66 255.4 173 75.1
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 3.2e-66 255.4 180 73.9
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 4.2e-66 255.0 175 77.7
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 4.2e-66 255.0 173 76.3
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 4.2e-66 255.0 179 77.1
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 7.2e-66 254.2 169 78.1
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 7.2e-66 254.2 173 75.1
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 7.2e-66 254.2 178 76.4
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.2e-66 254.2 176 75.6
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 7.2e-66 254.2 177 75.7
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 7.2e-66 254.2 160 81.2
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 9.4e-66 253.8 177 76.3
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 9.4e-66 253.8 174 76.4
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 9.4e-66 253.8 167 76.6
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.2e-65 253.4 161 82.0
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.2e-65 253.4 177 76.3
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.2e-65 253.4 175 74.9
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 1.6e-65 253.1 174 76.4
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.6e-65 253.1 174 77.6
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.6e-65 253.1 161 79.5
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 2.1e-65 252.7 175 75.4
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.1e-65 252.7 178 75.8
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.1e-65 252.7 177 75.1
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.7e-65 252.3 175 76.0
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 2.7e-65 252.3 176 73.9
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 2.7e-65 252.3 180 75.6
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 3.6e-65 251.9 175 74.3
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 3.6e-65 251.9 175 74.3
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.6e-65 251.9 176 73.9
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.6e-65 251.9 176 73.9
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 3.6e-65 251.9 154 83.1
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 4.7e-65 251.5 175 76.6
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 4.7e-65 251.5 173 75.7
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 8.0e-65 250.8 175 73.1
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 8.0e-65 250.8 175 73.1
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.0e-64 250.4 177 76.8
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.4e-64 250.0 177 75.7
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.8e-64 249.6 177 75.7
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.8e-64 249.6 176 73.3
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.8e-64 249.6 176 73.3
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 1.8e-64 249.6 178 73.0
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.8e-64 249.6 175 73.1
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 3.0e-64 248.8 175 70.9
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.0e-64 248.8 176 73.9
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 3.0e-64 248.8 180 72.2
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 3.0e-64 248.8 180 72.2
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 3.0e-64 248.8 180 72.2
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 3.9e-64 248.4 175 73.1
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 5.2e-64 248.1 175 70.9
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.2e-64 248.1 175 70.9
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 5.2e-64 248.1 153 82.4
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 5.2e-64 248.1 153 83.7
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 6.7e-64 247.7 175 74.9
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 8.8e-64 247.3 175 70.9
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 2.0e-63 246.1 153 81.0
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 2.6e-63 245.7 151 82.1
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 4.4e-63 245.0 181 71.8
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 4.4e-63 245.0 177 72.3
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 5.7e-63 244.6 147 84.4
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.7e-62 241.9 178 71.9
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.8e-61 239.6 151 76.8
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 5.3e-61 238.0 153 77.8
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 4.5e-60 235.0 174 71.8
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 8.5e-59 230.7 154 76.0
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 8.5e-59 230.7 163 72.4
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.5e-58 229.9 161 74.5
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 4.2e-58 228.4 166 71.7
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 7.2e-58 227.6 152 74.3
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 1.6e-57 226.5 142 78.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.7e-57 225.7 176 67.0
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 2.7e-57 225.7 153 73.9
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.3e-56 222.6 155 74.8
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 2.3e-56 222.6 175 66.3
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.5e-55 219.9 137 80.3
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 5.9e-52 208.0 131 79.4
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 7.7e-52 207.6 152 69.7
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 2.9e-51 205.7 167 65.9
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.5e-50 203.4 145 73.1
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.9e-50 203.0 118 87.3
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.6e-49 199.9 153 65.4
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 8.8e-48 194.1 120 82.5
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 3.4e-47 192.2 154 65.6
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.4e-47 192.2 120 81.7
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.7e-46 189.9 160 65.0
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 6.3e-46 188.0 107 87.9
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.2e-44 183.7 107 86.0
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.2e-44 183.7 121 78.5
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 4.5e-44 181.8 131 67.2
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 2.9e-43 179.1 108 84.3
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 6.6e-43 177.9 152 58.6
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 9.2e-37 157.5 129 66.7
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.5e-34 150.2 91 81.3
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.1e-29 132.1 123 50.4
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.1e-16 89.4 106 51.9
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 3.1e-08 62.8 118 44.9


User provided reference genes

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