Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.3e-108 396.4 197 100.0
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 6.2e-82 307.8 195 82.1
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.1e-81 307.0 194 80.9
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 4.1e-78 295.0 193 75.6
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 6.6e-76 287.7 195 77.9
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 7.1e-70 267.7 195 74.4
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 1.3e-50 203.8 210 53.3
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.3e-50 203.8 160 65.6
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 2.1e-50 203.0 124 75.0
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 2.1e-50 203.0 162 62.3
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 6.2e-50 201.4 160 61.9
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 6.2e-50 201.4 129 73.6
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 8.1e-50 201.1 123 77.2
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.4e-49 200.3 143 66.4
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 1.4e-49 200.3 163 63.2
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.8e-49 199.9 145 67.6
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 3.1e-49 199.1 163 63.2
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 4.0e-49 198.7 155 64.5
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 4.0e-49 198.7 121 74.4
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 6.9e-49 198.0 164 61.6
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.2e-48 197.2 143 66.4
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.2e-48 197.2 123 74.8
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.5e-48 196.8 160 60.6
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 2.6e-48 196.1 165 60.0
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 5.8e-48 194.9 127 71.7
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 7.6e-48 194.5 127 71.7
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 7.6e-48 194.5 121 75.2
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.0e-47 194.1 167 60.5
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.0e-47 194.1 196 56.1
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.0e-47 194.1 187 57.8
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.7e-47 193.4 180 58.9
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.7e-47 193.4 192 54.7
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 3.8e-47 192.2 124 71.0
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 4.9e-47 191.8 151 61.6
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 4.9e-47 191.8 192 54.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 6.5e-47 191.4 146 65.1
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 8.4e-47 191.0 134 70.1
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.1e-46 190.7 169 58.0
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 1.1e-46 190.7 133 66.9
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 1.4e-46 190.3 167 59.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.9e-46 189.9 151 63.6
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.9e-46 189.9 135 66.7
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.9e-46 189.9 169 55.6
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.9e-46 189.9 133 67.7
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.9e-46 189.9 125 69.6
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.5e-46 189.5 185 55.1
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 2.5e-46 189.5 146 65.8
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.5e-46 189.5 136 66.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 3.2e-46 189.1 148 63.5
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 7.1e-46 188.0 187 54.0
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 1.2e-45 187.2 123 72.4
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 1.2e-45 187.2 209 51.2
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 1.2e-45 187.2 176 55.1
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.6e-45 186.8 123 71.5
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 1.6e-45 186.8 132 68.2
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.1e-45 186.4 137 66.4
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.1e-45 186.4 119 74.8
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 4.6e-45 185.3 142 63.4
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 6.0e-45 184.9 192 52.6
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 1.0e-44 184.1 190 54.7
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 1.3e-44 183.7 109 78.9
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 1.8e-44 183.3 184 55.4
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.0e-44 182.6 166 56.0
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 8.7e-44 181.0 123 69.1
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.1e-43 180.6 123 68.3
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.1e-43 180.6 123 68.3
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.9e-43 179.9 124 69.4
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.9e-43 179.9 118 66.9
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 5.7e-43 178.3 119 68.1
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.7e-43 178.3 123 67.5
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 7.4e-43 177.9 183 53.0
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 7.4e-43 177.9 164 55.5
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 9.6e-43 177.6 123 70.7
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.3e-42 177.2 120 70.0
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.3e-42 177.2 122 67.2
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 1.6e-42 176.8 172 54.1
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 2.8e-42 176.0 141 64.5
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.7e-42 175.6 121 71.9
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 6.2e-42 174.9 141 63.8
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 6.2e-42 174.9 139 63.3
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 6.2e-42 174.9 139 63.3
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 6.2e-42 174.9 139 63.3
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 6.2e-42 174.9 139 63.3
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 6.2e-42 174.9 139 63.3
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 6.2e-42 174.9 158 60.1
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.2e-42 174.5 138 63.8
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 8.2e-42 174.5 141 63.8
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 8.2e-42 174.5 125 66.4
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.1e-41 174.1 138 58.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.4e-41 173.7 128 66.4
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.0e-41 172.2 170 52.9
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 4.0e-41 172.2 141 63.1
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.5e-40 170.2 139 61.2
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.3e-39 167.2 166 53.0
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.7e-39 166.8 141 60.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.2e-39 166.4 141 58.2
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 4.2e-38 162.2 116 62.9
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.0e-36 157.5 100 71.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 2.8e-34 149.4 119 58.8
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.8e-34 149.4 137 54.0
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.3e-28 129.8 110 61.8
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.3e-28 129.8 110 61.8
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.3e-28 129.8 110 61.8
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 2.8e-26 122.9 81 66.7
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 6.3e-26 121.7 131 45.8
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 4.1e-25 119.0 118 54.2
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.2e-24 117.5 81 71.6
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 3.4e-24 115.9 115 51.3
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.1e-22 110.9 120 46.7
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 2.0e-19 100.1 119 44.5
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.3e-15 87.4 114 38.6
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.9e-14 83.6 70 61.4
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.4e-14 81.3 46 73.9
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 3.1e-09 66.2 42 59.5
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 1.2e-08 64.3 124 35.5


User provided reference genes

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