Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G134.9 Capsicum annuum HOM05D001070 ORTHO05D002096 7.3e-89 331.3 275 100.0
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 2.7e-43 179.9 190 57.9
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.7e-41 172.2 192 56.8
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.7e-41 172.2 192 56.8
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.7e-41 172.2 192 56.8
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.7e-41 172.2 192 56.8
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.7e-41 172.2 192 56.8
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 6.3e-40 168.7 190 54.7
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 5.3e-39 165.6 175 68.0
CAN.G1045.8 Capsicum annuum HOM05D001070 ORTHO05D002096 1.5e-38 164.1 152 100.0
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 1.7e-37 160.6 181 55.8
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-37 160.6 181 55.8
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-37 160.6 181 55.8
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 2.3e-34 150.2 155 69.7
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.3e-33 146.0 192 51.0
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 7.4e-33 145.2 301 57.1
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 2.8e-32 143.3 151 80.8
Nitab4.5_0002628g0020 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.8e-32 143.3 188 50.5
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.1e-31 141.4 190 48.9
Solyc11g044680.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.1e-31 139.8 181 50.3
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 6.5e-29 132.1 142 56.3
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 8.8e-26 121.7 143 53.1
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 1.5e-22 110.9 132 53.0
Peaxi162Scf00338g00618 Petunia axillaris HOM05D001070 ORTHO05D002096 1.5e-22 110.9 132 53.0
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 1.5e-22 110.9 132 53.0
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 1.3e-21 107.8 132 51.5
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 4.2e-20 102.8 182 41.8
Nitab4.5_0000172g2260 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.3e-16 91.3 99 57.6
Solyc12g036550.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.7e-16 89.7 123 49.6
Solyc02g011860.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.7e-14 82.0 71 66.2
CAN.G1298.17 Capsicum annuum HOM05D001070 ORTHO05D004271 1.5e-12 77.8 64 98.4
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.6e-11 73.2 63 65.1
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.1e-11 72.4 64 64.1
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 8.0e-11 72.0 134 42.5
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 8.0e-11 72.0 134 42.5
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 2.3e-10 70.5 180 36.7
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 2.3e-10 70.5 180 36.7
TAR624G0722 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.5e-09 67.8 190 40.0
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.5e-09 67.8 190 40.0
Nitab4.5_0004137g0090 Nicotiana tabacum HOM05D001070 ORTHO05D002096 4.4e-09 66.2 150 34.0
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 5.7e-09 65.9 204 36.8
TAR626G0349 Trochodendron aralioides HOM05D001070 ORTHO05D002096 7.5e-09 65.5 190 40.0
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 1.3e-08 64.7 152 37.5
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 2.2e-08 63.9 188 34.6
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.7e-08 63.2 193 34.7
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 1.1e-07 61.6 157 36.3
Sed0002593 Sechium edule HOM05D001070 ORTHO05D002096 1.4e-07 61.2 180 41.7
Sed0025207 Sechium edule HOM05D001070 ORTHO05D002096 1.4e-07 61.2 180 41.7
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 4.1e-07 59.7 135 48.9
Peaxi162Scf00629g00021 Petunia axillaris HOM05D001032 ORTHO05D000907 9.1e-07 58.5 45 64.4
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.6e-06 57.8 190 42.6
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 2.0e-06 57.4 90 42.2
Nitab4.5_0001152g0850 Nicotiana tabacum HOM05D011856 ORTHO05D013014 4.5e-06 56.2 29 89.7


User provided reference genes

Program Settings