Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G134.82 Capsicum annuum HOM05D001789 ORTHO05D001755 1.9e-217 758.8 378 100.0
CAN.G134.77 Capsicum annuum HOM05D001789 ORTHO05D001755 2.0e-65 253.8 343 49.6
Peaxi162Scf00282g00618 Petunia axillaris HOM05D001789 ORTHO05D001755 3.1e-50 203.4 309 45.0
Dinv20290 Davidia involucrata HOM05D001789 ORTHO05D001755 1.8e-45 187.6 405 36.0
Nitab4.5_0009495g0030 Nicotiana tabacum HOM05D001789 ORTHO05D001755 2.3e-45 187.2 405 36.8
Sopen01g040880 Solanum pennellii HOM05D001789 ORTHO05D001755 5.2e-45 186.0 391 40.4
Nitab4.5_0006088g0040 Nicotiana tabacum HOM05D001789 ORTHO05D001755 5.7e-44 182.6 402 35.3
GSVIVG01036270001 Vitis vinifera HOM05D001789 ORTHO05D001755 1.4e-42 177.9 408 34.6
Gohir.A13G169500 Gossypium hirsutum HOM05D001789 ORTHO05D001755 3.0e-40 170.2 407 33.4
Gorai.013G200300 Gossypium raimondii HOM05D001789 ORTHO05D001755 3.0e-40 170.2 407 32.9
Gohir.D13G175000 Gossypium hirsutum HOM05D001789 ORTHO05D001755 5.0e-40 169.5 409 32.0
Sopen01g040860 Solanum pennellii HOM05D001789 ORTHO05D001755 1.1e-39 168.3 395 34.9
COL.COLO4_15370 Corchorus olitorius HOM05D001789 ORTHO05D001755 3.3e-39 166.8 392 34.2
Cc02_g30810 Coffea canephora HOM05D001789 ORTHO05D001755 1.6e-38 164.5 412 32.0
CDE06G0784 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 5.2e-37 159.5 410 32.0
CSS0016190 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 1.2e-36 158.3 407 32.7
CARHR078940 Cardamine hirsuta HOM05D001789 ORTHO05D001755 2.2e-35 154.1 390 34.4
TAR365G0302 Trochodendron aralioides HOM05D001789 ORTHO05D001755 8.3e-35 152.1 384 31.8
Lsat_1_v5_gn_2_64421 Lactuca sativa HOM05D001789 ORTHO05D001755 1.9e-34 151.0 309 36.9
PGSC0003DMG400019460 Solanum tuberosum HOM05D001789 ORTHO05D001755 4.1e-34 149.8 338 37.6
MD04G1226000 Malus domestica HOM05D001789 ORTHO05D001755 7.0e-34 149.1 389 32.1
ATR0665G154 Amborella trichopoda HOM05D001789 ORTHO05D001755 9.2e-34 148.7 409 31.8
BcaB04g19305 Brassica carinata HOM05D001789 ORTHO05D001755 9.2e-34 148.7 393 33.8
Cpa.g.sc617.3 Carica papaya HOM05D001789 ORTHO05D001755 9.2e-34 148.7 407 32.4
EL10Ac4g09088 Beta vulgaris HOM05D001789 ORTHO05D001755 1.2e-33 148.3 410 31.7
Eucgr.H04321 Eucalyptus grandis HOM05D001789 ORTHO05D001755 6.0e-33 146.0 385 32.5
CiPaw.07G068600 Carya illinoinensis HOM05D001789 ORTHO05D001755 7.8e-33 145.6 407 31.0
Ah.06g192110 Amaranthus hybridus HOM05D001789 ORTHO05D001755 1.3e-32 144.8 407 30.0
A03p33800 Brassica napus HOM05D001789 ORTHO05D001755 2.5e-31 140.6 385 32.7
SEGI_21200 Sequoiadendron giganteum HOM05D001789 ORTHO05D001755 5.6e-31 139.4 353 34.3
BcaB04g21349 Brassica carinata HOM05D001789 ORTHO05D001755 7.3e-31 139.0 384 34.1
BraA01t04507Z Brassica rapa HOM05D001789 ORTHO05D001755 7.3e-31 139.0 384 33.3
Solyc01g097190.4 Solanum lycopersicum HOM05D001789 ORTHO05D001755 1.2e-30 138.3 395 31.6
MSTRG.20457 Avicennia marina HOM05D001789 ORTHO05D001755 2.1e-30 137.5 381 31.8
C03p41100 Brassica napus HOM05D001789 ORTHO05D001755 4.7e-30 136.3 385 33.5
Duzib128G1133 Durio zibethinus HOM05D001789 ORTHO05D001755 6.2e-30 136.0 341 32.8
Manes.09G151500 Manihot esculenta HOM05D001789 ORTHO05D001755 1.1e-29 135.2 294 35.7
BcaC01g04353 Brassica carinata HOM05D001789 ORTHO05D001755 2.3e-29 134.0 385 33.0
ClCG02G016750 Citrullus lanatus HOM05D001789 ORTHO05D001755 4.0e-29 133.3 434 28.8
ECA238G2814 Erigeron canadensis HOM05D001789 ORTHO05D001755 5.2e-29 132.9 386 30.6
Rhsim07G0074300 Rhododendron simsii HOM05D001789 ORTHO05D001755 5.2e-29 132.9 336 30.4
RcHm_v2.0_Chr3g0450651 Rosa chinensis HOM05D001789 ORTHO05D001755 5.2e-29 132.9 444 29.1
BNapus_Darmor_BZH_scaffold_78p00990 Brassica napus HOM05D001789 ORTHO05D001755 5.8e-28 129.4 384 32.8
AL3G14790 Arabidopsis lyrata HOM05D001789 ORTHO05D001755 9.9e-28 128.6 386 32.6
CsaV3_2G003990 Cucumis sativus L. HOM05D001789 ORTHO05D001755 1.3e-27 128.3 392 29.3
CANSAT54G0997 Cannabis sativa HOM05D001789 ORTHO05D001755 4.9e-27 126.3 398 28.4
BcaC09g47780 Brassica carinata HOM05D001789 ORTHO05D001755 6.4e-27 125.9 384 31.5
Manes.08G136000 Manihot esculenta HOM05D001789 ORTHO05D001755 1.1e-26 125.2 392 29.1
Migut.B01098 Erythranthe guttata HOM05D001789 ORTHO05D001755 1.9e-26 124.4 346 32.9
MELO3C004392.2 Cucumis melo HOM05D001789 ORTHO05D001755 2.4e-26 124.0 393 28.8
Lju50C34T11 Lonicera japonica HOM05D001789 ORTHO05D001755 4.1e-26 123.2 395 28.9
Nn1g02587 Nelumbo nucifera HOM05D001789 ORTHO05D001755 4.1e-26 123.2 394 30.2
Thhalv10020698m.g Eutrema salsugineum HOM05D001789 ORTHO05D001755 2.1e-25 120.9 385 31.9
Solyc01g097200.1 Solanum lycopersicum HOM05D001789 ORTHO05D001755 4.6e-25 119.8 124 55.6
Ciclev10028402m.g Citrus clementina HOM05D001789 ORTHO05D001755 6.0e-25 119.4 392 30.1
Carub.0003s0386 Capsella rubella HOM05D001789 ORTHO05D001755 1.7e-24 117.9 384 31.2
Sp3g03550 Schrenkiella parvula HOM05D001789 ORTHO05D001755 3.9e-24 116.7 388 30.4
Aa31LG5G15100 Aethionema arabicum HOM05D001789 ORTHO05D001755 1.5e-23 114.8 387 28.4
PGR004G2017 Punica granatum HOM05D001789 ORTHO05D001755 1.5e-23 114.8 387 27.4
Haze_04374 Corylus avellana HOM05D001789 ORTHO05D001755 1.9e-23 114.4 411 28.0
AUR62004900 Chenopodium quinoa HOM05D001789 ORTHO05D001755 3.3e-23 113.6 391 26.9
THA.LOC104821668 Tarenaya hassleriana HOM05D001789 ORTHO05D001755 4.3e-23 113.2 391 28.9
Aqoxy2G03554 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 5.6e-23 112.8 387 29.7
Prupe.6G344800 Prunus persica HOM05D001789 ORTHO05D001755 5.6e-23 112.8 405 27.9
vmacro13812 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 7.3e-23 112.5 298 32.2
Sabra05G0047600 Salix brachista HOM05D001789 ORTHO05D001755 6.8e-21 105.9 374 29.7
AT3G04710 Arabidopsis thaliana HOM05D001789 ORTHO05D001755 1.2e-20 105.1 382 30.1
AUR62001052 Chenopodium quinoa HOM05D001789 ORTHO05D001755 1.2e-20 105.1 384 26.3
Oeu016446.1 Olea europaea HOM05D001789 ORTHO05D000116 1.2e-20 105.1 78 64.1
Sc15g0002530 Simmondsia chinensis HOM05D001789 ORTHO05D001755 1.2e-20 105.1 86 60.5
unitig_37.g12638 Utricularia gibba HOM05D001789 ORTHO05D001755 1.2e-20 105.1 389 28.8
Sopen01g040890 Solanum pennellii HOM05D001789 ORTHO05D001755 1.5e-20 104.8 295 32.9
Thecc.05G281000 Theobroma cacao HOM05D001789 ORTHO05D001755 2.0e-20 104.4 386 27.5
TAR636G0648 Trochodendron aralioides HOM05D001789 ORTHO05D001755 2.6e-20 104.0 96 57.3
Ca_09427_v3 Cicer arietinum L. HOM05D001789 ORTHO05D001755 2.2e-19 100.9 97 53.6
Solyc01g097220.3 Solanum lycopersicum HOM05D001789 ORTHO05D001755 5.4e-18 96.3 100 56.0
Psat0s1144g0080 Pisum sativum HOM05D001789 ORTHO05D001755 2.1e-17 94.4 348 28.2
Os02g0492900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.9e-16 90.1 119 42.0
SalBow8G1668 Salvia bowleyana HOM05D001789 ORTHO05D001755 3.3e-15 87.0 408 24.5
Os12g0636100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 5.6e-15 86.3 136 43.4
FvH4_6g02680 Fragaria vesca HOM05D001789 ORTHO05D001755 7.3e-15 85.9 385 25.2
Psat4g049680 Pisum sativum HOM05D001789 ORTHO05D001755 7.3e-15 85.9 82 51.2
vmacro14863 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.6e-14 84.7 136 36.0
Sed0022842 Sechium edule HOM05D001789 ORTHO05D001755 2.1e-14 84.3 68 58.8
PSO541G5496 Papaver somniferum HOM05D001789 ORTHO05D001755 2.8e-14 84.0 82 54.9
PSO675G2350 Papaver somniferum HOM05D001789 ORTHO05D001755 4.7e-14 83.2 117 41.0
PSO384G1410 Papaver somniferum HOM05D001789 ORTHO05D001755 6.2e-14 82.8 150 35.3
SGA_v2.0_scaffold36G14395 Striga asiatica HOM05D001789 ORTHO05D001755 6.2e-14 82.8 294 28.6
AagrBONN_evm.TU.Sc2ySwM_368.3405 Anthoceros agrestis HOM05D001789 ORTHO05D001755 1.4e-13 81.6 353 28.3
Os05g0103600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.4e-13 81.6 407 23.8
PSO339G5673 Papaver somniferum HOM05D001789 ORTHO05D001755 1.8e-13 81.3 150 34.7
Duzib177G0999 Durio zibethinus HOM05D001789 ORTHO05D001755 3.1e-13 80.5 68 57.4
Os01g0189100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 4.0e-13 80.1 121 40.5
Aqoxy2G03555 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 5.2e-13 79.7 118 40.7
PGSC0003DMG400019459 Solanum tuberosum HOM05D001789 ORTHO05D001755 5.2e-13 79.7 123 39.8
Atru.chr2.837 Acer truncatum HOM05D001789 ORTHO05D001755 1.2e-12 78.6 138 37.7
Medtr7g115280 Medicago truncatula HOM05D001789 ORTHO05D001755 1.2e-12 78.6 157 36.9
PSO063G6555 Papaver somniferum HOM05D001789 ORTHO05D001755 1.2e-12 78.6 131 38.2
PSO675G1802 Papaver somniferum HOM05D001789 ORTHO05D001755 2.0e-12 77.8 106 44.3
FAN02G1989 Fragaria x ananassa HOM05D001789 ORTHO05D001755 2.6e-12 77.4 291 28.5
FAN09G2804 Fragaria x ananassa HOM05D001789 ORTHO05D001755 2.6e-12 77.4 291 28.5
PSO017G4288 Papaver somniferum HOM05D001789 ORTHO05D001755 2.6e-12 77.4 109 44.0
Actinidia18365 Actinidia chinensis HOM05D001789 ORTHO05D001755 4.4e-12 76.6 407 22.9
PSO782G4460 Papaver somniferum HOM05D001789 ORTHO05D001755 4.4e-12 76.6 141 36.9
TWI56G1124 Tripterygium wilfordii HOM05D001789 ORTHO05D001755 5.8e-12 76.3 149 38.3
Aqoxy2G03556 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 7.6e-12 75.9 103 45.6
C09p67110 Brassica napus HOM05D001789 ORTHO05D001755 7.6e-12 75.9 92 48.9
Cfa006403 Carpinus fangiana HOM05D001789 ORTHO05D001755 7.6e-12 75.9 411 22.9
Os03g0680400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 9.9e-12 75.5 138 37.7
PSO421G0436 Papaver somniferum HOM05D001789 ORTHO05D001755 9.9e-12 75.5 118 39.0
Potri.005G054800 Populus trichocarpa HOM05D001789 ORTHO05D001755 1.3e-11 75.1 161 33.5
EL10Ac5g10456 Beta vulgaris HOM05D001789 ORTHO05D001755 1.7e-11 74.7 119 39.5
Glyma.19G245700 Glycine max HOM05D001789 ORTHO05D001755 1.7e-11 74.7 148 35.1
Rhsim05G0163200 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.7e-11 74.7 74 50.0
C04p32670 Brassica napus HOM05D001789 ORTHO05D001755 2.2e-11 74.3 81 51.9
BolC1t01159H Brassica oleracea HOM05D001789 ORTHO05D001755 2.2e-11 74.3 88 50.0
Carub.0002s1030 Capsella rubella HOM05D001789 ORTHO05D001755 2.2e-11 74.3 82 54.9
Os09g0124100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.9e-11 73.9 122 35.2
BolC2t10099H Brassica oleracea HOM05D001789 ORTHO05D001755 3.8e-11 73.6 87 47.1
Aqoxy7G03203 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 4.9e-11 73.2 133 34.6
PSO170G3495 Papaver somniferum HOM05D001789 ORTHO05D001755 4.9e-11 73.2 148 33.1
BcaC03g16286 Brassica carinata HOM05D001789 ORTHO05D001755 6.4e-11 72.8 112 42.0
BcaC09g51561 Brassica carinata HOM05D000816 ORTHO05D001755 6.4e-11 72.8 82 52.4
C02p40820 Brassica napus HOM05D001789 ORTHO05D001755 1.4e-10 71.6 80 50.0
Zm00001eb034120 Zea mays HOM05D001789 ORTHO05D001755 2.4e-10 70.9 112 38.4
C01p11840 Brassica napus HOM05D001789 ORTHO05D001755 4.2e-10 70.1 85 51.8
VMungo1309G1460 Vigna mungo HOM05D001789 ORTHO05D001755 4.2e-10 70.1 68 50.0
BraA03t12554Z Brassica rapa HOM05D001789 ORTHO05D001755 5.4e-10 69.7 133 37.6
Os03g0679800 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 5.4e-10 69.7 117 39.3
PSO063G0240 Papaver somniferum HOM05D001789 ORTHO05D001755 5.4e-10 69.7 120 38.3
VMungo0343G0001 Vigna mungo HOM05D001789 ORTHO05D001755 9.3e-10 68.9 64 50.0
Lj1g0007033 Lotus japonicus HOM05D001789 ORTHO05D001755 1.2e-09 68.6 148 33.1
PSO782G4634 Papaver somniferum HOM05D001789 ORTHO05D001755 1.2e-09 68.6 135 34.8
BolC5t30026H Brassica oleracea HOM05D001789 ORTHO05D001755 1.6e-09 68.2 96 45.8
Os12g0599900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.6e-09 68.2 92 43.5
Zm00001eb356200 Zea mays HOM05D001789 ORTHO05D001755 2.7e-09 67.4 396 23.0
Os02g0493300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.5e-09 67.0 119 37.0
BcaC01g00159 Brassica carinata HOM05D001789 ORTHO05D001755 4.6e-09 66.6 69 52.2
PSO170G3794 Papaver somniferum HOM05D001789 ORTHO05D001755 4.6e-09 66.6 129 34.9
HPP92_009631 Vanilla planifolia HOM05D001789 ORTHO05D001755 6.0e-09 66.2 148 32.4
Os01g0171100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 7.8e-09 65.9 98 41.8
SGA_v2.0_scaffold199G41172 Striga asiatica HOM05D001789 ORTHO05D001755 7.8e-09 65.9 52 61.5
MD12G1243100 Malus domestica HOM05D001789 ORTHO05D001755 1.0e-08 65.5 64 45.3
Os03g0680300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.3e-08 65.1 125 36.8
Peaxi162Scf00533g00068 Petunia axillaris HOM05D001789 ORTHO05D001755 2.3e-08 64.3 130 34.6
Pp3c26_10740 Physcomitrium patens HOM05D001789 ORTHO05D001755 2.3e-08 64.3 406 23.2
Os12g0634900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.0e-08 63.9 129 35.7
Aqoxy4G01760 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 3.9e-08 63.5 134 31.3
QL12p018052 Quercus lobata HOM05D001789 ORTHO05D001755 3.9e-08 63.5 104 38.5
PSO384G2359 Papaver somniferum HOM05D001789 ORTHO05D001755 5.1e-08 63.2 106 40.6
Rhsim05G0163300 Rhododendron simsii HOM05D001789 ORTHO05D001755 5.1e-08 63.2 152 30.9
Os03g0680600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 6.6e-08 62.8 125 36.8
PSO210G6779 Papaver somniferum HOM05D001789 ORTHO05D001755 6.6e-08 62.8 123 36.6
PSO478G0068 Papaver somniferum HOM05D001789 ORTHO05D001755 6.6e-08 62.8 106 36.8
Psat0s1144g0120 Pisum sativum HOM05D001789 ORTHO05D001755 8.7e-08 62.4 56 53.6
Peaxi162Scf03278g00003 Petunia axillaris HOM05D001789 ORTHO05D001755 1.1e-07 62.0 45 68.9
PSO017G5894 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-07 61.6 133 33.1
PSO461G0078 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-07 61.6 123 35.8
PSO339G0875 Papaver somniferum HOM05D001789 ORTHO05D001755 2.5e-07 60.8 132 31.1
PSO478G3394 Papaver somniferum HOM05D001789 ORTHO05D001755 2.5e-07 60.8 106 38.7
Phvul.006G102400 Phaseolus vulgaris HOM05D001789 ORTHO05D001755 2.5e-07 60.8 147 30.6
CAN.G134.83 Capsicum annuum HOM05D001789 ORTHO05D001755 3.3e-07 60.5 54 59.3
Aqoxy5G00332 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 5.6e-07 59.7 122 33.6
Manes.05G085350 Manihot esculenta HOM05D001789 ORTHO05D001755 5.6e-07 59.7 93 37.6
Manes.05G085400 Manihot esculenta HOM05D001789 ORTHO05D001755 5.6e-07 59.7 93 37.6
vmacro17118 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 5.6e-07 59.7 46 63.0
Dinv34576 Davidia involucrata HOM05D001789 ORTHO05D010416 9.6e-07 58.9 105 35.2
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 1.3e-06 58.5 126 31.0
Rhsim05G0163400 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.6e-06 58.2 58 48.3
PSO339G6309 Papaver somniferum HOM05D001789 ORTHO05D001755 2.1e-06 57.8 175 26.9
PSO384G2589 Papaver somniferum HOM05D001789 ORTHO05D001755 2.8e-06 57.4 127 32.3
SalBow4G2988 Salvia bowleyana HOM05D001789 ORTHO05D001755 2.8e-06 57.4 113 32.7
COL.COLO4_03560 Corchorus olitorius HOM05D001789 ORTHO05D001755 3.6e-06 57.0 95 36.8
Sabra05G0168200 Salix brachista HOM05D001789 ORTHO05D001755 3.6e-06 57.0 89 36.0
TWI75G1758 Tripterygium wilfordii HOM05D002893 ORTHO05D003387 3.6e-06 57.0 139 29.5
Aqoxy3G02736 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 6.2e-06 56.2 57 49.1
MBI11_g36864_MAGBIO Magnolia biondii HOM05D001789 ORTHO05D001755 6.2e-06 56.2 138 31.2
PSO170G0197 Papaver somniferum HOM05D001789 ORTHO05D001755 6.2e-06 56.2 108 33.3
PSO782G1762 Papaver somniferum HOM05D001789 ORTHO05D001755 6.2e-06 56.2 187 26.7


User provided reference genes

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