Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G134.42 Capsicum annuum HOM05D000823 ORTHO05D000088 1.0e-47 193.0 91 100.0
Sopen01g040490 Solanum pennellii HOM05D000823 ORTHO05D000088 7.6e-27 123.6 88 68.2
Solyc01g096790.4 Solanum lycopersicum HOM05D000823 ORTHO05D000088 1.9e-25 119.0 88 67.0
Nitab4.5_0002687g0070 Nicotiana tabacum HOM05D000395 ORTHO05D000088 2.5e-17 92.0 66 63.6
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 1.9e-09 65.9 69 46.4
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 5.5e-09 64.3 64 43.8
Rhsim10G0125600 Rhododendron simsii HOM05D000823 ORTHO05D000088 5.5e-09 64.3 85 38.8
Lj6C562T8 Lonicera japonica HOM05D000823 ORTHO05D000088 1.6e-08 62.8 74 40.5
Lj7C19G3 Lonicera japonica HOM05D000395 ORTHO05D000088 1.6e-08 62.8 64 43.8
MBI16_g26331_MAGBIO Magnolia biondii HOM05D000395 ORTHO05D000088 2.1e-08 62.4 80 36.2
Lj7C16T11 Lonicera japonica HOM05D000395 ORTHO05D000088 3.6e-08 61.6 64 43.8
Lj7A19G27 Lonicera japonica HOM05D000395 ORTHO05D000088 6.1e-08 60.8 64 43.8
CSS0012563 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 7.9e-08 60.5 73 39.7
Aqoxy6G00928 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.0e-07 60.1 83 41.0
MSTRG.16968 Avicennia marina HOM05D000823 ORTHO05D000088 1.0e-07 60.1 64 42.2
Cc07_g20980 Coffea canephora HOM05D000823 ORTHO05D000088 1.0e-07 60.1 69 42.0
Nn5g28071 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.0e-07 60.1 73 35.6
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.4e-07 59.7 62 38.7
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.8e-07 59.3 70 37.1
MBI16_g47024_MAGBIO Magnolia biondii HOM05D000395 ORTHO05D000088 1.8e-07 59.3 65 44.6
MD04G1034600 Malus domestica HOM05D000823 ORTHO05D000088 1.8e-07 59.3 77 33.8
CSS0000969 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 2.3e-07 58.9 69 42.0
CSS0025372 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 2.3e-07 58.9 69 42.0
CiPaw.06G020300 Carya illinoinensis HOM05D000395 ORTHO05D000088 3.0e-07 58.5 57 43.9
AUR62005183 Chenopodium quinoa HOM05D000823 ORTHO05D000088 3.0e-07 58.5 63 42.9
MD03G1230100 Malus domestica HOM05D000823 ORTHO05D000088 3.0e-07 58.5 67 40.3
ClCG01G016540 Citrullus lanatus HOM05D000395 ORTHO05D000088 3.9e-07 58.2 70 37.1
Hund06613 Selenicereus undatus HOM05D000823 ORTHO05D000088 3.9e-07 58.2 63 44.4
EL10Ac4g08958 Beta vulgaris HOM05D000823 ORTHO05D000088 5.1e-07 57.8 71 35.2
FAN10G3479 Fragaria x ananassa HOM05D000823 ORTHO05D000088 5.1e-07 57.8 79 38.0
FAN24G3249 Fragaria x ananassa HOM05D000823 ORTHO05D000088 5.1e-07 57.8 62 38.7
vmacro05287 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 5.1e-07 57.8 74 37.8
Aqoxy6G00929 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 6.7e-07 57.4 76 36.8
Potri.010G191500 Populus trichocarpa HOM05D000395 ORTHO05D000088 6.7e-07 57.4 59 39.0
TAR628G1113 Trochodendron aralioides HOM05D000395 ORTHO05D000088 6.7e-07 57.4 88 31.8
arahy.Tifrunner.gnm1.ann1.K3F6Y2 Arachis hypogaea HOM05D000823 ORTHO05D000088 8.8e-07 57.0 76 34.2
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 8.8e-07 57.0 84 38.1
MBI16_g19884_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 8.8e-07 57.0 85 34.1
Nn5g28570 Nelumbo nucifera HOM05D000803 ORTHO05D000088 8.8e-07 57.0 54 40.7
Eucgr.D00269 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.1e-06 56.6 67 38.8
FAN23G2649 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.1e-06 56.6 62 38.7
QL09p026034 Quercus lobata HOM05D000395 ORTHO05D000088 1.1e-06 56.6 68 39.7
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.1e-06 56.6 76 38.2
TAR628G1487 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.1e-06 56.6 64 42.2
unitig_61.g26370 Utricularia gibba HOM05D000823 ORTHO05D000088 1.1e-06 56.6 64 40.6
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.5e-06 56.2 74 33.8
FAN15G3419 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.5e-06 56.2 62 38.7
FAN20G0950 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.5e-06 56.2 62 38.7
FAN20G2013 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.5e-06 56.2 62 38.7
QL09p026218 Quercus lobata HOM05D000395 ORTHO05D000088 1.5e-06 56.2 57 45.6
Sopen06g030390 Solanum pennellii HOM05D000823 ORTHO05D000088 1.5e-06 56.2 63 41.3
CANSAT01G3239 Cannabis sativa HOM05D000395 ORTHO05D000088 2.0e-06 55.8 57 43.9
Gohir.A03G116300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 2.0e-06 55.8 78 38.5
MD04G1034500 Malus domestica HOM05D000823 ORTHO05D000088 2.0e-06 55.8 77 33.8
Peaxi162Scf01514g00024 Petunia axillaris HOM05D000823 ORTHO05D000088 2.0e-06 55.8 84 36.9
Atru.chr2.2906 Acer truncatum HOM05D000823 ORTHO05D000088 2.6e-06 55.5 89 36.0
Atru.chr5.2870 Acer truncatum HOM05D000395 ORTHO05D000088 2.6e-06 55.5 74 29.7
AUR62016449 Chenopodium quinoa HOM05D000395 ORTHO05D000088 2.6e-06 55.5 65 36.9
Migut.B00294 Erythranthe guttata HOM05D000823 ORTHO05D000088 2.6e-06 55.5 57 43.9
Eucgr.H01965 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.6e-06 55.5 71 35.2
Prupe.7G144200 Prunus persica HOM05D000395 ORTHO05D000088 2.6e-06 55.5 65 41.5
ATR0626G172 Amborella trichopoda HOM05D000823 ORTHO05D000088 3.3e-06 55.1 67 37.3
AUR62042926 Chenopodium quinoa HOM05D000395 ORTHO05D000088 3.3e-06 55.1 65 36.9
Eucgr.D00268 Eucalyptus grandis HOM05D000395 ORTHO05D000088 3.3e-06 55.1 67 37.3
FvH4_2g27400 Fragaria vesca HOM05D000823 ORTHO05D000088 3.3e-06 55.1 62 38.7
Lsat_1_v5_gn_3_94221 Lactuca sativa HOM05D000823 ORTHO05D000088 3.3e-06 55.1 66 40.9
arahy.Tifrunner.gnm1.ann1.4VG87B Arachis hypogaea HOM05D000823 ORTHO05D000088 4.4e-06 54.7 74 33.8
BcaB04g20081 Brassica carinata HOM05D000823 ORTHO05D000088 4.4e-06 54.7 74 41.9
AUR62033072 Chenopodium quinoa HOM05D000395 ORTHO05D000088 4.4e-06 54.7 65 36.9
FvH4_7g23440 Fragaria vesca HOM05D000823 ORTHO05D000088 4.4e-06 54.7 79 36.7
FAN01G3102 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.4e-06 54.7 79 36.7
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.4e-06 54.7 70 41.4
FAN06G0999 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.4e-06 54.7 79 36.7
FAN06G1958 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.4e-06 54.7 79 36.7
Manes.13G131000 Manihot esculenta HOM05D000823 ORTHO05D000088 4.4e-06 54.7 68 35.3
Hund08735 Selenicereus undatus HOM05D000823 ORTHO05D000088 4.4e-06 54.7 58 39.7
HPP92_017058 Vanilla planifolia HOM05D000823 ORTHO05D000088 4.4e-06 54.7 70 35.7
EL10Ac8g19102 Beta vulgaris HOM05D000823 ORTHO05D000088 5.7e-06 54.3 62 33.9
SalBow8G3609 Salvia bowleyana HOM05D000823 ORTHO05D000088 5.7e-06 54.3 64 37.5
Sed0022882 Sechium edule HOM05D000823 ORTHO05D000088 5.7e-06 54.3 69 37.7
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 5.7e-06 54.3 85 31.8
Atru.chr5.2871 Acer truncatum HOM05D000395 ORTHO05D000088 7.4e-06 53.9 59 39.0
EL10Ac4g09374 Beta vulgaris HOM05D000823 ORTHO05D000088 7.4e-06 53.9 64 42.2
MD08G1039500 Malus domestica HOM05D000823 ORTHO05D000088 7.4e-06 53.9 71 35.2
Atru.chr5.2852 Acer truncatum HOM05D000395 ORTHO05D000088 9.7e-06 53.5 59 40.7
CANSAT01G1891 Cannabis sativa HOM05D000395 ORTHO05D000088 9.7e-06 53.5 56 37.5
ECA238G2245 Erigeron canadensis HOM05D000395 ORTHO05D000088 9.7e-06 53.5 57 42.1
Medtr1g021440 Medicago truncatula HOM05D000823 ORTHO05D000088 9.7e-06 53.5 75 36.0
Nn6g32143 Nelumbo nucifera HOM05D000395 ORTHO05D000088 9.7e-06 53.5 57 42.1
QL09p019482 Quercus lobata HOM05D000395 ORTHO05D000088 9.7e-06 53.5 68 38.2
RcHm_v2.0_Chr5g0033031 Rosa chinensis HOM05D000823 ORTHO05D000088 9.7e-06 53.5 62 37.1
RcHm_v2.0_Chr6g0296251 Rosa chinensis HOM05D000823 ORTHO05D000088 9.7e-06 53.5 67 38.8
SEGI_06639 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 9.7e-06 53.5 68 38.2
SEGI_41472 Sequoiadendron giganteum HOM05D000823 ORTHO05D006479 9.7e-06 53.5 68 38.2
Solyc01g108930.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 9.7e-06 53.5 69 36.2
Sopen01g051130 Solanum pennellii HOM05D000823 ORTHO05D000088 9.7e-06 53.5 69 36.2


User provided reference genes

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