Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 8.7e-102 373.6 187 100.0
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 2.8e-100 368.6 187 98.4
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.1e-99 365.2 187 96.8
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 3.1e-99 365.2 187 96.3
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 4.0e-99 364.8 187 96.3
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 9.0e-99 363.6 187 96.3
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 2.6e-98 362.1 187 96.3
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 94.1
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 91.4
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 93.0
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 90.9
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 92.5
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 92.0
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 91.4
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 91.4
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 90.9
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 92.0
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 6.0e-95 350.9 187 90.9
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 7.9e-95 350.5 187 91.4
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.8
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 89.3
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 90.4
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 89.8
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 89.8
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 90.4
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 1.8e-94 349.4 186 89.8
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 89.8
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 89.8
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 90.9
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 88.8
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 90.9
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.8
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 2.3e-94 349.0 206 85.9
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 89.3
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 89.8
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 89.8
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 89.3
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 90.4
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 88.8
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 89.3
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 89.8
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 89.3
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 90.9
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 91.4
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 6.7e-94 347.4 201 87.1
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 6.7e-94 347.4 196 88.3
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 90.4
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 88.8
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 89.3
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.8
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.8
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 89.3
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 1.5e-93 346.3 186 89.8
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 88.8
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 88.8
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 89.3
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 88.2
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 88.8
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.8
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.8
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.2
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 5.7e-93 344.4 187 89.8
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 5.7e-93 344.4 187 89.3
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 88.2
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 88.2
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 88.2
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 87.7
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 9.6e-93 343.6 184 90.2
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 87.2
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.8
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.2
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 2.1e-92 342.4 185 89.2
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.7
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 88.8
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.7
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.8e-92 342.0 200 84.5
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 88.2
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.7
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 87.7
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 87.7
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 1.1e-91 340.1 186 88.2
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.4e-91 339.7 182 89.6
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 1.4e-91 339.7 185 85.9
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.8e-91 339.3 187 87.7
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 87.2
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 87.2
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 86.6
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 3.1e-91 338.6 187 86.6
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.1
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.6
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.6
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 9.0e-91 337.0 187 86.6
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 9.0e-91 337.0 185 85.4
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.2e-90 336.7 181 89.0
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 2.0e-90 335.9 187 86.1
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 85.6
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 3.4e-90 335.1 187 85.6
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 85.6
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 85.6
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 85.6
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 85.6
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 5.8e-90 334.3 187 84.5
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 7.6e-90 334.0 187 85.0
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.0e-89 333.6 187 84.5
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.0e-89 333.6 187 85.0
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.3e-89 333.2 187 85.0
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.7e-89 332.8 182 85.7
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.7e-89 332.8 182 85.7
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 2.9e-89 332.0 203 80.8
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 1.4e-88 329.7 193 83.4
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 5.5e-88 327.8 208 77.9
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 5.5e-88 327.8 183 86.3
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 1.2e-87 326.6 187 84.5
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 1.0e-86 323.6 206 78.2
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.8e-86 322.8 241 69.3
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 1.1e-85 320.1 211 77.3
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 7.4e-85 317.4 186 81.2
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 3.7e-84 315.1 173 87.3
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.2e-82 310.1 173 85.5
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 1.7e-81 306.2 185 77.8
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 6.5e-81 304.3 169 85.2
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 2.5e-80 302.4 187 82.9
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 4.2e-80 301.6 187 75.9
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 4.2e-80 301.6 187 75.9
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 5.5e-80 301.2 187 81.8
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 7.9e-79 297.4 187 74.9
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.4e-78 296.6 187 81.3
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 1.8e-78 296.2 187 74.3
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 3.0e-78 295.4 187 75.4
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 9.7e-77 290.4 172 78.5
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 5.3e-75 284.6 172 77.9
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 1.5e-74 283.1 187 77.5
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 4.5e-74 281.6 158 86.1
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 1.0e-73 280.4 149 91.3
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 2.9e-73 278.9 187 75.4
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 2.9e-73 278.9 186 75.3
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 6.5e-73 277.7 154 86.4
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.6e-71 273.1 148 89.2
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 4.1e-67 258.5 214 59.8
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 9.1e-67 257.3 158 79.1
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 1.5e-64 250.0 187 71.1
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 6.1e-63 244.6 187 70.1
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 6.7e-62 241.1 172 63.4
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.6e-55 219.9 124 84.7
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.3e-54 216.1 133 76.7
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 5.9e-50 201.4 167 56.3
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 1.1e-48 197.2 103 88.3
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 4.2e-48 195.3 175 54.9
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 8.0e-47 191.0 106 86.8
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 4.0e-46 188.7 181 59.1
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.5e-45 186.8 98 85.7
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 2.0e-45 186.4 139 66.9
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 3.4e-45 185.7 103 80.6
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.2e-42 177.2 98 82.7
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 2.3e-38 162.9 85 92.9
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 5.8e-29 131.7 142 54.2
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 6.8e-22 108.2 68 72.1
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.7e-18 96.3 52 90.4
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 3.5e-18 95.9 52 92.3
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 7.3e-16 88.2 49 87.8
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.8e-14 83.6 41 95.1
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 8.9e-14 81.3 45 86.7
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.4e-13 79.3 92 52.2
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 4.4e-13 79.0 47 80.9
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 3.7e-12 75.9 68 57.4
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 6.4e-12 75.1 41 82.9
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 5.4e-11 72.0 39 79.5


User provided reference genes

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