Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1339.21 Capsicum annuum HOM05D001370 ORTHO05D002518 4.7e-55 217.6 111 100.0
CAN.G1339.25 Capsicum annuum HOM05D001370 ORTHO05D002518 1.4e-43 179.5 110 86.4
CAN.G1447.5 Capsicum annuum HOM05D001370 ORTHO05D002518 7.1e-43 177.2 107 86.9
CAN.G1339.10 Capsicum annuum HOM05D001370 ORTHO05D002518 2.3e-41 172.2 107 85.0
CAN.G1339.15 Capsicum annuum HOM05D001370 ORTHO05D002518 1.5e-40 169.5 107 84.1
CAN.G1339.13 Capsicum annuum HOM05D001370 ORTHO05D002518 1.4e-38 162.9 107 81.3
CAN.G1339.27 Capsicum annuum HOM05D001370 ORTHO05D002518 1.4e-38 162.9 107 81.3
CAN.G1339.17 Capsicum annuum HOM05D001370 ORTHO05D002518 1.8e-38 162.5 107 81.3
CAN.G1447.11 Capsicum annuum HOM05D001370 ORTHO05D002518 2.4e-35 152.1 107 75.7
CAN.G1447.13 Capsicum annuum HOM05D001370 ORTHO05D002518 2.1e-34 149.1 107 76.6
CAN.G1339.9 Capsicum annuum HOM05D001370 ORTHO05D002518 6.0e-34 147.5 107 72.9
CAN.G305.21 Capsicum annuum HOM05D001370 ORTHO05D002518 8.7e-33 143.7 107 72.9
Solyc05g054700.3 Solanum lycopersicum HOM05D001370 ORTHO05D002518 1.5e-32 142.9 107 72.0
Sopen05g033160 Solanum pennellii HOM05D001370 ORTHO05D002518 1.5e-32 142.9 107 72.0
PGSC0003DMG400023418 Solanum tuberosum HOM05D001370 ORTHO05D002518 4.3e-32 141.4 107 71.0
Peaxi162Scf00015g00219 Petunia axillaris HOM05D001370 ORTHO05D002518 9.6e-32 140.2 107 70.1
CAN.G1447.14 Capsicum annuum HOM05D001370 ORTHO05D002518 2.2e-28 129.0 94 75.5
Nitab4.5_0008833g0010 Nicotiana tabacum HOM05D001370 ORTHO05D002518 6.4e-28 127.5 109 68.8
Nitab4.5_0005184g0010 Nicotiana tabacum HOM05D001370 ORTHO05D002518 2.4e-27 125.6 109 67.9
CAN.G503.5 Capsicum annuum HOM05D001370 ORTHO05D002518 9.0e-22 107.1 107 57.9
CSS0030500 Camellia sinensis var. sinensis HOM05D001370 ORTHO05D002518 2.5e-19 99.0 96 54.2
RhsimUnG0097100 Rhododendron simsii HOM05D001370 ORTHO05D002518 4.6e-18 94.7 111 51.4
Hma1.2p1_0207F.1_g087710 Hydrangea macrophylla HOM05D001370 ORTHO05D002518 7.9e-18 94.0 110 50.0
Hma1.2p1_0727F.1_g209075 Hydrangea macrophylla HOM05D001370 ORTHO05D002518 1.8e-17 92.8 110 49.1
Dinv25963 Davidia involucrata HOM05D001370 ORTHO05D002518 6.7e-17 90.9 112 49.1
CAN.G1339.29 Capsicum annuum HOM05D001370 ORTHO05D002518 1.5e-16 89.7 50 90.0
vmacro07144 Vaccinium macrocarpon HOM05D001370 ORTHO05D002518 1.5e-16 89.7 113 49.6
Cc02_g08460 Coffea canephora HOM05D001370 ORTHO05D002518 2.5e-16 89.0 118 45.8
TWI15G1197 Tripterygium wilfordii HOM05D001370 ORTHO05D002518 5.7e-16 87.8 107 51.4
CiPaw.01G282000 Carya illinoinensis HOM05D001370 ORTHO05D002518 1.6e-15 86.3 113 47.8
Haze_16996 Corylus avellana HOM05D001370 ORTHO05D002518 3.7e-15 85.1 112 49.1
Oeu040014.3 Olea europaea HOM05D001370 ORTHO05D002518 3.7e-15 85.1 108 50.0
Cfa001538 Carpinus fangiana HOM05D001370 ORTHO05D002518 4.8e-15 84.7 112 49.1
Cpa.g.sc1696.2 Carica papaya HOM05D001370 ORTHO05D002518 6.3e-15 84.3 114 49.1
CiPaw.02G180300 Carya illinoinensis HOM05D001370 ORTHO05D002518 1.1e-14 83.6 113 46.9
Dinv31410 Davidia involucrata HOM05D001370 ORTHO05D002518 1.4e-14 83.2 110 48.2
QL08p058018 Quercus lobata HOM05D001370 ORTHO05D002518 2.4e-14 82.4 114 49.1
CAN.G1339.24 Capsicum annuum HOM05D001370 ORTHO05D002518 3.1e-14 82.0 79 59.5
Gohir.D04G061200 Gossypium hirsutum HOM05D001370 ORTHO05D002518 3.1e-14 82.0 114 48.2
Gorai.012G068100 Gossypium raimondii HOM05D001370 ORTHO05D002518 3.1e-14 82.0 114 48.2
Gohir.A05G351500 Gossypium hirsutum HOM05D001370 ORTHO05D002518 4.1e-14 81.6 114 48.2
Thecc.10G057500 Theobroma cacao HOM05D001370 ORTHO05D002518 6.9e-14 80.9 114 47.4
Ciclev10030706m.g Citrus clementina HOM05D001370 ORTHO05D002518 1.5e-13 79.7 95 50.5
CAN.G1339.18 Capsicum annuum HOM05D001370 ORTHO05D115583 2.0e-13 79.3 58 72.4
COL.COLO4_10923 Corchorus olitorius HOM05D001370 ORTHO05D002518 2.6e-13 79.0 114 44.7
Actinidia34346 Actinidia chinensis HOM05D001370 ORTHO05D002518 3.4e-13 78.6 115 45.2
CAN.G503.3 Capsicum annuum HOM05D001370 ORTHO05D002518 3.4e-13 78.6 57 71.9
Lj1P932T14 Lonicera japonica HOM05D001370 ORTHO05D002518 4.5e-13 78.2 110 42.7
GSVIVG01016637001 Vitis vinifera HOM05D001370 ORTHO05D002518 4.5e-13 78.2 104 48.1
Gohir.D10G219900 Gossypium hirsutum HOM05D001370 ORTHO05D002518 7.6e-13 77.4 114 46.5
Gorai.011G246600 Gossypium raimondii HOM05D001370 ORTHO05D002518 7.6e-13 77.4 114 46.5
Duzib106G1608 Durio zibethinus HOM05D001370 ORTHO05D002518 1.0e-12 77.0 115 46.1
Gohir.A10G211900 Gossypium hirsutum HOM05D001370 ORTHO05D002518 1.0e-12 77.0 115 46.1
CANSAT56G0616 Cannabis sativa HOM05D001370 ORTHO05D002518 1.3e-12 76.6 113 46.0
DCAR_015225 Daucus carota HOM05D001370 ORTHO05D002518 1.7e-12 76.3 105 44.8
Manes.07G110400 Manihot esculenta HOM05D001370 ORTHO05D002518 2.9e-12 75.5 110 46.4
THA.LOC104806415 Tarenaya hassleriana HOM05D001370 ORTHO05D002518 2.9e-12 75.5 104 51.9
Ca_07181_v3 Cicer arietinum L. HOM05D001370 ORTHO05D002518 6.5e-12 74.3 100 45.0
Ca_29878_v3 Cicer arietinum L. HOM05D001370 ORTHO05D002518 6.5e-12 74.3 100 45.0
Duzib114G0713 Durio zibethinus HOM05D001370 ORTHO05D002518 8.5e-12 73.9 96 46.9
Psat3g184920 Pisum sativum HOM05D001370 ORTHO05D002518 8.5e-12 73.9 101 43.6
ClCG07G003050 Citrullus lanatus HOM05D001370 ORTHO05D002518 1.1e-11 73.6 92 51.1
Nn2g10498 Nelumbo nucifera HOM05D001370 ORTHO05D002518 1.4e-11 73.2 114 41.2
CsaV3_5G006730 Cucumis sativus L. HOM05D001370 ORTHO05D002518 1.9e-11 72.8 92 51.1
Lj1g0004559 Lotus japonicus HOM05D001370 ORTHO05D002518 1.9e-11 72.8 112 43.8
MD07G1190200 Malus domestica HOM05D001370 ORTHO05D002518 1.9e-11 72.8 109 45.9
Aqoxy4G03041 Aquilegia oxysepala HOM05D001370 ORTHO05D002518 2.5e-11 72.4 88 47.7
Atru.chr12.560 Acer truncatum HOM05D001370 ORTHO05D002518 3.2e-11 72.0 92 45.7
arahy.Tifrunner.gnm1.ann1.0H136B Arachis hypogaea HOM05D001370 ORTHO05D002518 3.2e-11 72.0 92 47.8
arahy.Tifrunner.gnm1.ann1.L8BGWM Arachis hypogaea HOM05D001370 ORTHO05D002518 3.2e-11 72.0 92 47.8
MD01G1120800 Malus domestica HOM05D001370 ORTHO05D002518 3.2e-11 72.0 109 45.9
MELO3C023830.2 Cucumis melo HOM05D001370 ORTHO05D002518 4.2e-11 71.6 114 45.6
FAN10G1480 Fragaria x ananassa HOM05D001370 ORTHO05D002518 7.2e-11 70.9 99 47.5
FvH4_7g21250 Fragaria vesca HOM05D001370 ORTHO05D002518 9.4e-11 70.5 99 46.5
FAN06G0060 Fragaria x ananassa HOM05D001370 ORTHO05D002518 9.4e-11 70.5 99 46.5
Sed0003077 Sechium edule HOM05D001370 ORTHO05D002518 9.4e-11 70.5 93 49.5
Ah.16g107530 Amaranthus hybridus HOM05D001370 ORTHO05D002518 1.2e-10 70.1 113 44.2
FAN03G0479 Fragaria x ananassa HOM05D001370 ORTHO05D002518 1.2e-10 70.1 99 46.5
BcaC02g09740 Brassica carinata HOM05D001370 ORTHO05D002518 1.6e-10 69.7 104 46.2
BolC4t25280H Brassica oleracea HOM05D001370 ORTHO05D002518 1.6e-10 69.7 104 46.2
AUR62035948 Chenopodium quinoa HOM05D001370 ORTHO05D002518 2.1e-10 69.3 112 44.6
FAN06G4207 Fragaria x ananassa HOM05D001370 ORTHO05D002518 2.1e-10 69.3 99 46.5
Prupe.2G228100 Prunus persica HOM05D001370 ORTHO05D002518 2.1e-10 69.3 114 45.6
VMungo0331G1034 Vigna mungo HOM05D001370 ORTHO05D002518 2.1e-10 69.3 114 43.9
Sed0015325 Sechium edule HOM05D001370 ORTHO05D002518 2.7e-10 68.9 96 45.8
EL10Ac2g03456 Beta vulgaris HOM05D001370 ORTHO05D002518 3.6e-10 68.6 112 43.8
Potri.008G049900 Populus trichocarpa HOM05D001370 ORTHO05D002518 3.6e-10 68.6 119 42.0
Sc09g0007290 Simmondsia chinensis HOM05D001370 ORTHO05D002518 3.6e-10 68.6 115 45.2
THA.LOC104824258 Tarenaya hassleriana HOM05D001370 ORTHO05D002518 3.6e-10 68.6 106 45.3
Potri.010G210900 Populus trichocarpa HOM05D001370 ORTHO05D002518 4.6e-10 68.2 119 40.3
PGR044G2712 Punica granatum HOM05D001370 ORTHO05D002518 6.1e-10 67.8 100 42.0
Aa31LG10G9780 Aethionema arabicum HOM05D001370 ORTHO05D002518 7.9e-10 67.4 115 44.3
CAN.G2763.1 Capsicum annuum HOM05D001370 ORTHO05D002518 7.9e-10 67.4 36 91.7
ECA233G1109 Erigeron canadensis HOM05D001370 ORTHO05D002518 7.9e-10 67.4 114 39.5
VMungo1383G1542 Vigna mungo HOM05D001370 ORTHO05D002518 7.9e-10 67.4 101 43.6
HanXRQChr08g0220021 Helianthus annuus HOM05D001370 ORTHO05D002518 1.0e-09 67.0 99 46.5
RcHm_v2.0_Chr1g0365691 Rosa chinensis HOM05D001370 ORTHO05D002518 1.0e-09 67.0 108 44.4
A04p04680 Brassica napus HOM05D001370 ORTHO05D002518 1.4e-09 66.6 104 45.2
C04p37060 Brassica napus HOM05D001370 ORTHO05D002518 1.4e-09 66.6 104 45.2
BraA04t16180Z Brassica rapa HOM05D001370 ORTHO05D002518 1.4e-09 66.6 104 45.2
PSO206G0041 Papaver somniferum HOM05D001370 ORTHO05D002518 1.4e-09 66.6 85 47.1
TAR633G2416 Trochodendron aralioides HOM05D001370 ORTHO05D002518 1.4e-09 66.6 103 40.8
PSO339G6450 Papaver somniferum HOM05D001370 ORTHO05D002518 1.8e-09 66.2 85 47.1
Sabra10G0163000 Salix brachista HOM05D001370 ORTHO05D002518 1.8e-09 66.2 121 39.7
Sabra08G0036000 Salix brachista HOM05D001370 ORTHO05D002518 2.3e-09 65.9 119 41.2
ECA238G4199 Erigeron canadensis HOM05D001370 ORTHO05D002518 3.0e-09 65.5 107 43.9
MBI05_g07847_MAGBIO Magnolia biondii HOM05D001370 ORTHO05D002518 3.0e-09 65.5 104 43.3
Manes.10G037800 Manihot esculenta HOM05D001370 ORTHO05D002518 3.0e-09 65.5 94 45.7
AUR62022523 Chenopodium quinoa HOM05D001370 ORTHO05D002518 5.1e-09 64.7 112 43.8
Medtr7g023250 Medicago truncatula HOM05D001370 ORTHO05D002518 6.7e-09 64.3 104 41.3
Lsat_1_v5_gn_8_17260 Lactuca sativa HOM05D001370 ORTHO05D002518 8.8e-09 63.9 113 40.7
Thhalv10010135m.g Eutrema salsugineum HOM05D001370 ORTHO05D002518 1.1e-08 63.5 103 42.7
Sp5g07190 Schrenkiella parvula HOM05D001370 ORTHO05D002518 1.1e-08 63.5 101 40.6
CARHR165270 Cardamine hirsuta HOM05D001370 ORTHO05D002518 1.5e-08 63.2 104 42.3
BcaB02g08434 Brassica carinata HOM05D001370 ORTHO05D002518 1.9e-08 62.8 89 47.2
Carub.0005s2193 Capsella rubella HOM05D001370 ORTHO05D002518 1.9e-08 62.8 101 39.6
AL5G36410 Arabidopsis lyrata HOM05D001370 ORTHO05D002518 3.3e-08 62.0 101 39.6
SEGI_21106 Sequoiadendron giganteum HOM05D001370 ORTHO05D002518 5.7e-08 61.2 101 43.6
Glyma.02G095100 Glycine max HOM05D001370 ORTHO05D002518 1.7e-07 59.7 45 66.7
Glyma.18G286300 Glycine max HOM05D001370 ORTHO05D002518 1.7e-07 59.7 45 66.7
Hund22413 Selenicereus undatus HOM05D001370 ORTHO05D002518 1.7e-07 59.7 84 45.2
HPP92_006595 Vanilla planifolia HOM05D001370 ORTHO05D002518 1.7e-07 59.7 99 41.4
HanXRQChr07g0200751 Helianthus annuus HOM05D001370 ORTHO05D002518 2.2e-07 59.3 82 46.3
Zm00001eb266320 Zea mays HOM05D001370 ORTHO05D002518 4.8e-07 58.2 82 46.3
CAN.G503.2 Capsicum annuum HOM05D001370 ORTHO05D002518 8.2e-07 57.4 107 42.1
Zm00001eb355580 Zea mays HOM05D001370 ORTHO05D002518 8.2e-07 57.4 83 44.6
CDE09G1201 Ceratophyllum demersum HOM05D001370 ORTHO05D002518 1.1e-06 57.0 107 40.2
SHI08979 Sapria himalayana HOM05D001370 ORTHO05D002518 1.4e-06 56.6 111 37.8
TPR.G15503 Trifolium pratense HOM05D001370 ORTHO05D002518 5.3e-06 54.7 60 51.7
Ah.03g133400 Amaranthus hybridus HOM05D001370 ORTHO05D002518 9.1e-06 53.9 93 37.6


User provided reference genes

Program Settings