Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1335.3 Capsicum annuum HOM05D000906 ORTHO05D000713 3.8e-57 224.6 108 100.0
CAN.G650.15 Capsicum annuum HOM05D000906 ORTHO05D000713 1.9e-45 185.7 108 84.3
Sopen02g019690 Solanum pennellii HOM05D000906 ORTHO05D000713 4.3e-45 184.5 105 83.8
PGSC0003DMG400008303 Solanum tuberosum HOM05D000906 ORTHO05D000713 1.6e-44 182.6 105 83.8
Solyc02g070610.3 Solanum lycopersicum HOM05D000906 ORTHO05D000713 4.0e-43 177.9 105 81.9
CAN.G640.29 Capsicum annuum HOM05D000906 ORTHO05D000713 2.3e-38 162.2 88 87.5
Nitab4.5_0001655g0040 Nicotiana tabacum HOM05D000906 ORTHO05D000713 3.1e-35 151.8 96 79.2
Nitab4.5_0005219g0020 Nicotiana tabacum HOM05D000906 ORTHO05D000713 3.4e-34 148.3 96 77.1
Oeu020050.1 Olea europaea HOM05D000906 ORTHO05D000713 1.4e-27 126.3 98 61.2
MSTRG.15034 Avicennia marina HOM05D000906 ORTHO05D000713 1.5e-26 122.9 98 64.3
MSTRG.6740 Avicennia marina HOM05D000906 ORTHO05D000713 2.0e-26 122.5 103 61.2
Actinidia26766 Actinidia chinensis HOM05D000906 ORTHO05D000713 2.2e-25 119.0 101 55.4
TAR629G1308 Trochodendron aralioides HOM05D000906 ORTHO05D000713 2.9e-25 118.6 103 55.3
CDE06G1083 Ceratophyllum demersum HOM05D000906 ORTHO05D000713 3.8e-25 118.2 105 56.2
TAR627G0091 Trochodendron aralioides HOM05D000906 ORTHO05D000713 3.8e-25 118.2 101 57.4
Actinidia03642 Actinidia chinensis HOM05D000906 ORTHO05D000713 5.0e-25 117.9 101 54.5
Peaxi162Scf00035g00243 Petunia axillaris HOM05D000906 ORTHO05D000713 6.5e-25 117.5 93 60.2
TAR626G1229 Trochodendron aralioides HOM05D000906 ORTHO05D000713 1.4e-24 116.3 98 58.2
TAR626G1247 Trochodendron aralioides HOM05D000906 ORTHO05D000713 1.4e-24 116.3 98 58.2
Cfa023069 Carpinus fangiana HOM05D000906 ORTHO05D000713 3.2e-24 115.2 99 55.6
Cc05_g09690 Coffea canephora HOM05D000906 ORTHO05D000713 4.2e-24 114.8 101 57.4
TWI59G0051 Tripterygium wilfordii HOM05D000906 ORTHO05D000713 4.2e-24 114.8 101 56.4
GSVIVG01020848001 Vitis vinifera HOM05D000906 ORTHO05D000713 4.2e-24 114.8 100 55.0
DCAR_013321 Daucus carota HOM05D000906 ORTHO05D000713 5.5e-24 114.4 101 57.4
RcHm_v2.0_Chr6g0292461 Rosa chinensis HOM05D000906 ORTHO05D000713 5.5e-24 114.4 97 55.7
CSS0022459 Camellia sinensis var. sinensis HOM05D000906 ORTHO05D000713 7.2e-24 114.0 108 54.6
Hund15264 Selenicereus undatus HOM05D000906 ORTHO05D000713 7.2e-24 114.0 103 57.3
MD09G1149800 Malus domestica HOM05D000906 ORTHO05D000713 9.4e-24 113.6 100 54.0
Ciclev10031770m.g Citrus clementina HOM05D000906 ORTHO05D000713 1.2e-23 113.2 99 57.6
FvH4_6g38560 Fragaria vesca HOM05D000906 ORTHO05D000713 1.2e-23 113.2 97 55.7
FAN02G1731 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.2e-23 113.2 97 55.7
FAN14G4058 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.2e-23 113.2 97 55.7
Nitab4.5_0008627g0010 Nicotiana tabacum HOM05D000906 ORTHO05D000713 1.6e-23 112.8 93 58.1
RcHm_v2.0_Chr2g0151971 Rosa chinensis HOM05D000906 ORTHO05D000713 1.6e-23 112.8 97 54.6
Lj1A601G22 Lonicera japonica HOM05D000906 ORTHO05D000713 2.1e-23 112.5 97 55.7
MD17G1136700 Malus domestica HOM05D000906 ORTHO05D000713 2.1e-23 112.5 98 55.1
Aqoxy1G01738 Aquilegia oxysepala HOM05D000906 ORTHO05D000713 3.6e-23 111.7 103 53.4
PSO017G5580 Papaver somniferum HOM05D000906 ORTHO05D000713 3.6e-23 111.7 107 52.3
Potri.005G204100 Populus trichocarpa HOM05D000906 ORTHO05D000713 4.7e-23 111.3 92 57.6
ECA233G3122 Erigeron canadensis HOM05D000906 ORTHO05D000713 6.1e-23 110.9 103 50.5
Nn4g26540 Nelumbo nucifera HOM05D000906 ORTHO05D000713 6.1e-23 110.9 95 60.0
Nn3g20696 Nelumbo nucifera HOM05D000906 ORTHO05D000713 7.9e-23 110.5 94 58.5
SalBow8G2291 Salvia bowleyana HOM05D000906 ORTHO05D000713 7.9e-23 110.5 98 57.1
FAN09G0892 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.0e-22 110.2 97 54.6
Nitab4.5_0004243g0040 Nicotiana tabacum HOM05D000906 ORTHO05D000713 1.0e-22 110.2 93 57.0
Peaxi162Scf00111g00230 Petunia axillaris HOM05D000906 ORTHO05D000713 1.0e-22 110.2 93 57.0
Thecc.01G170300 Theobroma cacao HOM05D000906 ORTHO05D000713 1.0e-22 110.2 96 55.2
Duzib133G1458 Durio zibethinus HOM05D000906 ORTHO05D000713 1.4e-22 109.8 96 55.2
Rhsim12G0008100 Rhododendron simsii HOM05D000906 ORTHO05D000713 1.4e-22 109.8 98 55.1
Lsat_1_v5_gn_8_128601 Lactuca sativa HOM05D000906 ORTHO05D000713 1.8e-22 109.4 99 55.6
Lalb_Chr04g0248861 Lupinus albus HOM05D000906 ORTHO05D000713 1.8e-22 109.4 92 59.8
QL08p044855 Quercus lobata HOM05D000906 ORTHO05D000713 2.3e-22 109.0 99 54.5
vmacro00999 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 2.3e-22 109.0 101 56.4
Gohir.A07G080800 Gossypium hirsutum HOM05D000906 ORTHO05D000713 3.0e-22 108.6 93 54.8
EL10Ac9g22846 Beta vulgaris HOM05D000906 ORTHO05D000713 3.9e-22 108.2 98 53.1
DCAR_023048 Daucus carota HOM05D000906 ORTHO05D000713 3.9e-22 108.2 100 55.0
CANSAT64G0233 Cannabis sativa HOM05D000906 ORTHO05D000713 5.1e-22 107.8 106 51.9
Gorai.001G092400 Gossypium raimondii HOM05D000906 ORTHO05D000713 5.1e-22 107.8 103 52.4
AUR62015138 Chenopodium quinoa HOM05D000906 ORTHO05D000713 8.8e-22 107.1 100 55.0
AUR62017598 Chenopodium quinoa HOM05D000906 ORTHO05D000713 8.8e-22 107.1 100 54.0
Duzib130G0004 Durio zibethinus HOM05D000906 ORTHO05D000713 8.8e-22 107.1 96 54.2
Sopen07g029610 Solanum pennellii HOM05D000906 ORTHO05D000713 8.8e-22 107.1 94 57.4
COL.COLO4_08897 Corchorus olitorius HOM05D000906 ORTHO05D000713 1.1e-21 106.7 99 51.5
Duzib138G1492 Durio zibethinus HOM05D000906 ORTHO05D000713 1.1e-21 106.7 96 54.2
Gohir.D07G086400 Gossypium hirsutum HOM05D000906 ORTHO05D000713 1.1e-21 106.7 103 52.4
Dinv08609 Davidia involucrata HOM05D000906 ORTHO05D000713 1.5e-21 106.3 99 54.5
Sc15g0002390 Simmondsia chinensis HOM05D000906 ORTHO05D000713 1.5e-21 106.3 93 55.9
PGSC0003DMG400017351 Solanum tuberosum HOM05D000906 ORTHO05D000713 1.5e-21 106.3 93 55.9
Solyc07g056250.3 Solanum lycopersicum HOM05D000906 ORTHO05D000713 2.0e-21 105.9 93 53.8
Eucgr.K01222 Eucalyptus grandis HOM05D000906 ORTHO05D000713 2.6e-21 105.5 102 53.9
Prupe.3G176300 Prunus persica HOM05D000906 ORTHO05D000713 2.6e-21 105.5 98 53.1
A02p12590 Brassica napus HOM05D000906 ORTHO05D000713 3.3e-21 105.1 96 55.2
BraA02t06317Z Brassica rapa HOM05D000906 ORTHO05D000713 3.3e-21 105.1 96 55.2
CAN.G585.24 Capsicum annuum HOM05D000906 ORTHO05D000713 3.3e-21 105.1 93 55.9
MBI07_g26371_MAGBIO Magnolia biondii HOM05D000906 ORTHO05D000713 3.3e-21 105.1 93 55.9
Atru.chr6.2059 Acer truncatum HOM05D000906 ORTHO05D000713 4.4e-21 104.8 93 55.9
Sed0020209 Sechium edule HOM05D000906 ORTHO05D000713 4.4e-21 104.8 104 50.0
Haze_13525 Corylus avellana HOM05D000906 ORTHO05D000713 5.7e-21 104.4 87 57.5
FvH4_2g24630 Fragaria vesca HOM05D000906 ORTHO05D000713 7.4e-21 104.0 98 53.1
Sabra02G0047400 Salix brachista HOM05D000906 ORTHO05D000713 7.4e-21 104.0 100 52.0
Ah.01g001920 Amaranthus hybridus HOM05D000906 ORTHO05D000713 9.7e-21 103.6 94 55.3
MELO3C026967.2 Cucumis melo HOM05D000906 ORTHO05D000713 9.7e-21 103.6 107 52.3
Ah.01g013670 Amaranthus hybridus HOM05D000906 ORTHO05D000713 1.3e-20 103.2 92 55.4
BcaC03g14632 Brassica carinata HOM05D000906 ORTHO05D000713 1.7e-20 102.8 96 54.2
C02p20650 Brassica napus HOM05D000906 ORTHO05D000713 1.7e-20 102.8 96 54.2
BolC2t08207H Brassica oleracea HOM05D000906 ORTHO05D000713 1.7e-20 102.8 96 54.2
FAN20G1126 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.7e-20 102.8 98 52.0
FAN27G1183 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.7e-20 102.8 98 52.0
Nitab4.5_0003104g0090 Nicotiana tabacum HOM05D000906 ORTHO05D000713 2.2e-20 102.4 95 54.7
Psat2g016840 Pisum sativum HOM05D000906 ORTHO05D000713 2.2e-20 102.4 92 57.6
Potri.002G058100 Populus trichocarpa HOM05D000906 ORTHO05D000713 2.2e-20 102.4 90 54.4
TPR.G12692 Trifolium pratense HOM05D000906 ORTHO05D000713 2.2e-20 102.4 92 54.3
Ca_06269_v3 Cicer arietinum L. HOM05D000906 ORTHO05D000713 2.8e-20 102.1 92 55.4
Eucgr.A02014 Eucalyptus grandis HOM05D000906 ORTHO05D000713 2.8e-20 102.1 100 52.0
TWI23G0749 Tripterygium wilfordii HOM05D000906 ORTHO05D000713 2.8e-20 102.1 93 53.8
CiPaw.04G138800 Carya illinoinensis HOM05D000906 ORTHO05D000713 3.7e-20 101.7 95 53.7
SalBow7G0675 Salvia bowleyana HOM05D000906 ORTHO05D000713 3.7e-20 101.7 96 53.1
Manes.02G088200 Manihot esculenta HOM05D000906 ORTHO05D000713 4.8e-20 101.3 95 53.7
ClCG11G016460 Citrullus lanatus HOM05D000906 ORTHO05D000713 6.3e-20 100.9 105 51.4
BolC9t56802H Brassica oleracea HOM05D000906 ORTHO05D000713 8.2e-20 100.5 97 50.5
Cpa.g.sc50.103 Carica papaya HOM05D000906 ORTHO05D000713 8.2e-20 100.5 98 54.1
unitig_747.g21600 Utricularia gibba HOM05D000906 ORTHO05D000713 8.2e-20 100.5 104 51.9
AL8G25080 Arabidopsis lyrata HOM05D000906 ORTHO05D000713 1.4e-19 99.8 95 52.6
Medtr5g091200 Medicago truncatula HOM05D000906 ORTHO05D000713 1.4e-19 99.8 92 54.3
CsaV3_4G031910 Cucumis sativus L. HOM05D000906 ORTHO05D000713 1.8e-19 99.4 99 54.5
Thhalv10013533m.g Eutrema salsugineum HOM05D000906 ORTHO05D000713 1.8e-19 99.4 96 54.2
FAN15G2150 Fragaria x ananassa HOM05D000906 ORTHO05D000713 1.8e-19 99.4 96 52.1
Manes.01G130400 Manihot esculenta HOM05D000906 ORTHO05D000713 1.8e-19 99.4 89 52.8
AT5G50890 Arabidopsis thaliana HOM05D000906 ORTHO05D000713 2.4e-19 99.0 95 52.6
Nitab4.5_0002209g0050 Nicotiana tabacum HOM05D000906 ORTHO05D000713 2.4e-19 99.0 95 54.7
Sp6g13020 Schrenkiella parvula HOM05D000906 ORTHO05D000713 2.4e-19 99.0 96 53.1
arahy.Tifrunner.gnm1.ann1.Y3Z7BF Arachis hypogaea HOM05D000906 ORTHO05D000713 4.1e-19 98.2 92 51.1
BcaB05g24025 Brassica carinata HOM05D000906 ORTHO05D000713 4.1e-19 98.2 96 52.1
THA.LOC104826237 Tarenaya hassleriana HOM05D000906 ORTHO05D000713 4.1e-19 98.2 96 54.2
A10p08050 Brassica napus HOM05D000906 ORTHO05D000713 5.3e-19 97.8 97 49.5
BraSC35t45994Z Brassica rapa HOM05D000906 ORTHO05D000713 5.3e-19 97.8 97 49.5
Carub.0008s1089 Capsella rubella HOM05D000906 ORTHO05D000713 5.3e-19 97.8 96 51.0
LjContig00049g0017958 Lotus japonicus HOM05D000906 ORTHO05D000713 5.3e-19 97.8 90 53.3
Aa31LG1G7930 Aethionema arabicum HOM05D000906 ORTHO05D000713 6.9e-19 97.4 101 49.5
ATR0585G053 Amborella trichopoda HOM05D000906 ORTHO05D000713 6.9e-19 97.4 102 50.0
BcaB08g35457 Brassica carinata HOM05D000906 ORTHO05D000713 6.9e-19 97.4 96 50.0
Migut.M00559 Erythranthe guttata HOM05D000906 ORTHO05D000713 6.9e-19 97.4 111 49.5
Oeu033981.1 Olea europaea HOM05D000906 ORTHO05D000713 6.9e-19 97.4 91 54.9
Duzib211G0155 Durio zibethinus HOM05D000906 ORTHO05D000713 9.1e-19 97.1 93 50.5
BcaC04g20785 Brassica carinata HOM05D000906 ORTHO05D000713 1.2e-18 96.7 94 51.1
Sabra05G0154800 Salix brachista HOM05D000906 ORTHO05D000713 1.2e-18 96.7 90 53.3
CARHR257370 Cardamine hirsuta HOM05D000906 ORTHO05D000713 1.5e-18 96.3 94 51.1
PGR142G0440 Punica granatum HOM05D000906 ORTHO05D000713 1.5e-18 96.3 110 47.3
Zm00001eb153450 Zea mays HOM05D000906 ORTHO05D000713 1.5e-18 96.3 95 49.5
HanXRQChr15g0484671 Helianthus annuus HOM05D000906 ORTHO05D000713 3.4e-18 95.1 96 51.0
PGSC0003DMG400021286 Solanum tuberosum HOM05D000906 ORTHO05D000713 3.4e-18 95.1 98 53.1
arahy.Tifrunner.gnm1.ann1.YMM8S7 Arachis hypogaea HOM05D000906 ORTHO05D000713 4.5e-18 94.7 92 50.0
Migut.E01771 Erythranthe guttata HOM05D000906 ORTHO05D000713 4.5e-18 94.7 100 49.0
Lalb_Chr15g0081261 Lupinus albus HOM05D000906 ORTHO05D000713 4.5e-18 94.7 105 50.5
Sopen10g003620 Solanum pennellii HOM05D000906 ORTHO05D000713 4.5e-18 94.7 97 51.5
SGA_v2.0_scaffold70G23617 Striga asiatica HOM05D000906 ORTHO05D000713 4.5e-18 94.7 96 50.0
CAN.G2018.4 Capsicum annuum HOM05D000906 ORTHO05D000713 5.9e-18 94.4 99 52.5
arahy.Tifrunner.gnm1.ann1.1IA0LX Arachis hypogaea HOM05D000906 ORTHO05D000713 1.0e-17 93.6 93 49.5
arahy.Tifrunner.gnm1.ann1.UGC1SE Arachis hypogaea HOM05D000906 ORTHO05D000713 1.0e-17 93.6 93 49.5
Solyc10g007710.3 Solanum lycopersicum HOM05D000906 ORTHO05D000713 1.3e-17 93.2 97 50.5
Glyma.02G285200 Glycine max HOM05D000906 ORTHO05D000713 1.7e-17 92.8 92 52.2
SGA_v2.0_scaffold697G53476 Striga asiatica HOM05D000906 ORTHO05D000713 1.7e-17 92.8 98 51.0
PSO017G2218 Papaver somniferum HOM05D000906 ORTHO05D000713 2.2e-17 92.4 100 43.0
HPP92_023267 Vanilla planifolia HOM05D000906 ORTHO05D000713 3.8e-17 91.7 92 47.8
HPP92_023298 Vanilla planifolia HOM05D000906 ORTHO05D000713 3.8e-17 91.7 92 47.8
Phvul.008G193600 Phaseolus vulgaris HOM05D000906 ORTHO05D000713 5.0e-17 91.3 96 49.0
Os01g0751600 Oryza sativa ssp. japonica HOM05D000906 ORTHO05D000713 6.5e-17 90.9 108 45.4
THA.LOC104815839 Tarenaya hassleriana HOM05D000906 ORTHO05D000713 6.5e-17 90.9 91 51.6
Zm00001eb359750 Zea mays HOM05D000906 ORTHO05D000713 6.5e-17 90.9 105 45.7
VMungo0540G2218 Vigna mungo HOM05D000906 ORTHO05D000713 8.5e-17 90.5 92 51.1
Glyma.08G308300 Glycine max HOM05D000906 ORTHO05D000713 1.1e-16 90.1 92 52.2
Lj6g0025194 Lotus japonicus HOM05D000906 ORTHO05D000713 1.1e-16 90.1 98 49.0
Phvul.006G031450 Phaseolus vulgaris HOM05D000906 ORTHO05D000713 1.1e-16 90.1 92 52.2
VMungo0647G1642 Vigna mungo HOM05D000906 ORTHO05D000713 3.2e-16 88.6 97 46.4
Psat5g194320 Pisum sativum HOM05D000906 ORTHO05D000713 4.2e-16 88.2 96 49.0
SGA_v2.0_scaffold4G02122 Striga asiatica HOM05D000906 ORTHO05D000713 5.5e-16 87.8 97 47.4
Ca_14604_v3 Cicer arietinum L. HOM05D000906 ORTHO05D000713 7.2e-16 87.4 92 50.0
Glyma.18G108700 Glycine max HOM05D000906 ORTHO05D000713 7.2e-16 87.4 95 51.6
Medtr3g046880 Medicago truncatula HOM05D000906 ORTHO05D000713 7.2e-16 87.4 95 48.4
Zm00001eb370890 Zea mays HOM05D000906 ORTHO05D000713 7.2e-16 87.4 97 47.4
Glyma.02G286400 Glycine max HOM05D000906 ORTHO05D000713 1.2e-15 86.7 91 49.5
SHI10530 Sapria himalayana HOM05D000906 ORTHO05D000713 1.2e-15 86.7 97 45.4
TPR.G16781 Trifolium pratense HOM05D000906 ORTHO05D000713 1.6e-15 86.3 96 45.8
Os01g0243000 Oryza sativa ssp. japonica HOM05D000906 ORTHO05D000713 2.3e-14 82.4 91 44.0
Prupe.8G030400 Prunus persica HOM05D000906 ORTHO05D000713 3.0e-14 82.0 82 48.8
FAN08G0338 Fragaria x ananassa HOM05D001729 ORTHO05D000713 4.4e-13 78.2 67 58.2
VMungo0647G0428 Vigna mungo HOM05D000906 ORTHO05D000713 5.7e-13 77.8 91 44.0
Zm00001eb122350 Zea mays HOM05D000906 ORTHO05D000713 9.7e-13 77.0 94 42.6
Psat5g240040 Pisum sativum HOM05D000906 ORTHO05D000713 1.3e-12 76.6 74 52.7
Phvul.008G193500 Phaseolus vulgaris HOM05D000906 ORTHO05D000713 2.2e-12 75.9 91 44.0
HanXRQChr15g0496391 Helianthus annuus HOM05D000906 ORTHO05D000713 2.8e-12 75.5 99 44.4
Psat5g240120 Pisum sativum HOM05D000906 ORTHO05D000713 3.7e-12 75.1 74 51.4
LjContig00049g0013473 Lotus japonicus HOM05D000906 ORTHO05D000713 4.8e-12 74.7 92 41.3
Migut.M00560 Erythranthe guttata HOM05D000906 ORTHO05D000713 4.1e-11 71.6 87 43.7
Medtr5g091240 Medicago truncatula HOM05D000906 ORTHO05D000713 4.1e-11 71.6 94 41.5
Psat0s1569g0080 Pisum sativum HOM05D000906 ORTHO05D000713 9.1e-11 70.5 95 43.2
arahy.Tifrunner.gnm1.ann1.M1AIB2 Arachis hypogaea HOM05D000906 ORTHO05D000713 1.3e-09 66.6 90 41.1
Actinidia00866 Actinidia chinensis HOM05D000906 ORTHO05D000713 2.2e-09 65.9 70 45.7
Os01g0666400 Oryza sativa ssp. japonica HOM05D000906 ORTHO05D000713 3.8e-09 65.1 104 34.6
Medtr5g091230 Medicago truncatula HOM05D000906 ORTHO05D000713 4.2e-08 61.6 92 40.2
FvH4_6g37920 Fragaria vesca HOM05D000906 ORTHO05D000713 9.4e-08 60.5 50 58.0
TPR.G12658 Trifolium pratense HOM05D000906 ORTHO05D000713 9.4e-08 60.5 92 40.2
MBI07_g15284_MAGBIO Magnolia biondii HOM05D000906 ORTHO05D000713 1.0e-06 57.0 61 49.2


User provided reference genes

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