Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 3.0e-235 818.1 414 100.0
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 4.4e-215 751.1 414 90.6
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 3.9e-211 738.0 425 87.8
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 5.1e-211 737.6 414 89.1
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.9e-186 656.0 352 91.8
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 4.8e-185 651.4 413 82.6
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.8e-176 622.9 388 80.2
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 6.1e-172 607.8 389 79.4
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.3e-169 600.1 403 74.9
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.2e-167 593.6 392 75.8
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 2.0e-167 592.8 411 73.2
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 2.6e-167 592.4 395 74.7
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 2.9e-166 589.0 411 73.5
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 8.5e-166 587.4 368 77.7
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 8.5e-166 587.4 386 75.6
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.9e-165 586.3 384 76.6
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.9e-165 586.3 403 73.7
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 5.5e-165 584.7 401 74.1
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.7e-164 582.4 403 73.4
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.7e-164 582.4 399 74.4
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 4.7e-164 581.6 378 78.3
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 4.7e-164 581.6 397 74.6
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 7.9e-164 580.9 388 75.3
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 7.9e-164 580.9 417 72.7
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 3.0e-163 578.9 375 75.7
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.7e-163 577.8 392 74.0
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.0e-162 576.2 375 75.7
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.6e-162 575.9 395 72.4
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 2.6e-162 575.9 369 77.8
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 2.6e-162 575.9 376 76.3
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 2.6e-162 575.9 404 71.5
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 3.3e-162 575.5 385 75.1
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 7.4e-162 574.3 380 77.1
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.7e-161 573.2 396 73.5
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 4.8e-161 571.6 399 72.9
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 6.3e-161 571.2 389 73.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 6.3e-161 571.2 417 71.0
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 1.8e-160 569.7 386 74.6
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 4.1e-160 568.5 404 72.3
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 9.1e-160 567.4 361 76.7
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.0e-159 566.2 389 74.3
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 7.7e-159 564.3 360 78.3
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.0e-158 563.9 394 71.8
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 1.0e-158 563.9 376 75.0
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.3e-158 563.5 382 75.4
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 2.9e-158 562.4 382 74.9
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 2.9e-158 562.4 359 76.6
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 5.0e-158 561.6 377 74.3
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.1e-157 560.5 377 74.3
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.5e-157 559.3 384 71.9
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 3.2e-157 558.9 409 71.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 4.2e-157 558.5 380 73.2
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 9.4e-157 557.4 401 70.3
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.6e-156 556.6 374 73.3
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 4.0e-155 552.0 395 72.4
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.0e-154 549.7 392 71.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 7.0e-152 541.2 432 68.3
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 9.1e-152 540.8 408 68.6
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 3.5e-151 538.9 372 72.8
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.7e-150 536.6 371 72.8
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 2.2e-150 536.2 385 69.6
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.9e-150 535.8 381 73.5
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.2e-148 530.4 359 75.5
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 1.8e-147 526.6 364 71.4
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 2.8e-145 519.2 401 67.3
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.5e-143 512.3 363 69.7
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 8.5e-142 507.7 342 75.4
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 4.7e-140 501.9 350 69.1
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 8.3e-137 491.1 351 66.7
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.5e-130 470.3 361 64.3
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.5e-130 470.3 361 64.3
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 2.6e-130 469.5 399 62.7
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 3.9e-126 455.7 394 63.7
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.3e-125 452.2 381 64.3
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 3.4e-122 442.6 300 75.0
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 2.8e-116 422.9 368 58.7
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.6e-106 389.8 361 55.7
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 7.6e-106 388.3 266 74.1
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 9.9e-106 387.9 277 71.8
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.3e-102 377.5 257 75.9
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 6.4e-97 358.6 312 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 3.2e-88 329.7 296 58.4
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 8.7e-86 321.6 228 71.9
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 4.9e-81 305.8 231 66.2
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 2.4e-75 287.0 380 43.4
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.2e-74 284.6 174 77.6
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.3e-65 254.6 226 61.5
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.2e-58 231.5 145 78.6
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.6e-47 194.5 140 70.7
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.0e-46 191.8 135 71.9
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 3.3e-08 63.9 75 49.3


User provided reference genes

Program Settings