Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1332.4 Capsicum annuum HOM05D000158 ORTHO05D004173 2.8e-90 335.9 173 100.0
TPR.G16515 Trifolium pratense HOM05D000158 ORTHO05D000197 3.6e-13 79.7 128 38.3
TPR.G36066 Trifolium pratense HOM05D000158 ORTHO05D000197 1.2e-11 74.7 100 46.0
arahy.Tifrunner.gnm1.ann1.9VJJ5C Arachis hypogaea HOM05D000158 ORTHO05D000197 2.4e-09 67.0 122 36.9
arahy.Tifrunner.gnm1.ann1.UC4KU4 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.4e-09 67.0 122 36.9
TPR.G7366 Trifolium pratense HOM05D000158 ORTHO05D000197 3.2e-09 66.6 94 43.6
arahy.Tifrunner.gnm1.ann1.BYKP53 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.1e-09 66.2 100 41.0
arahy.Tifrunner.gnm1.ann1.WN8MR8 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.1e-09 66.2 126 36.5
Nitab4.5_0000819g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.1e-09 66.2 99 39.4
TPR.G15889 Trifolium pratense HOM05D000158 ORTHO05D000197 4.1e-09 66.2 125 36.8
TPR.G22124 Trifolium pratense HOM05D000158 ORTHO05D000197 4.1e-09 66.2 125 36.8
TPR.G34405 Trifolium pratense HOM05D000158 ORTHO05D000197 4.1e-09 66.2 92 44.6
TPR.G40227 Trifolium pratense HOM05D000158 ORTHO05D000197 4.1e-09 66.2 125 36.8
TPR.G550 Trifolium pratense HOM05D000158 ORTHO05D002858 4.1e-09 66.2 125 36.8
arahy.Tifrunner.gnm1.ann1.SGPS2V Arachis hypogaea HOM05D000158 ORTHO05D000197 5.4e-09 65.9 100 40.0
arahy.Tifrunner.gnm1.ann1.T0AVIE Arachis hypogaea HOM05D000158 ORTHO05D000197 5.4e-09 65.9 106 38.7
TPR.G25318 Trifolium pratense HOM05D000158 ORTHO05D003614 5.4e-09 65.9 128 35.2
arahy.Tifrunner.gnm1.ann1.J01ZYU Arachis hypogaea HOM05D000158 ORTHO05D000197 7.0e-09 65.5 100 40.0
Lj2g0018729 Lotus japonicus HOM05D000158 ORTHO05D000197 7.0e-09 65.5 132 34.8
arahy.Tifrunner.gnm1.ann1.6U09DB Arachis hypogaea HOM05D000158 ORTHO05D000197 9.2e-09 65.1 112 33.9
arahy.Tifrunner.gnm1.ann1.82YQT6 Arachis hypogaea HOM05D000158 ORTHO05D000197 9.2e-09 65.1 126 34.9
arahy.Tifrunner.gnm1.ann1.AK2QJ3 Arachis hypogaea HOM05D000158 ORTHO05D000197 9.2e-09 65.1 112 33.9
arahy.Tifrunner.gnm1.ann1.I7E4L8 Arachis hypogaea HOM05D000158 ORTHO05D000197 9.2e-09 65.1 112 33.9
TPR.G22354 Trifolium pratense HOM05D000158 ORTHO05D002858 9.2e-09 65.1 128 35.2
TPR.G34774 Trifolium pratense HOM05D000158 ORTHO05D000197 9.2e-09 65.1 128 35.2
arahy.Tifrunner.gnm1.ann1.PC7CW8 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.2e-08 64.7 100 39.0
Lj3g0012861 Lotus japonicus HOM05D000158 ORTHO05D000197 1.2e-08 64.7 173 31.2
TPR.G31232 Trifolium pratense HOM05D000158 ORTHO05D002858 1.2e-08 64.7 127 34.6
arahy.Tifrunner.gnm1.ann1.HTN0Y5 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.6e-08 64.3 112 33.9
Nitab4.5_0002812g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-08 64.3 94 38.3
arahy.Tifrunner.gnm1.ann1.BYA8HJ Arachis hypogaea HOM05D000158 ORTHO05D000197 2.1e-08 63.9 100 39.0
TPR.G11637 Trifolium pratense HOM05D000158 ORTHO05D000197 2.1e-08 63.9 145 33.8
TPR.G15160 Trifolium pratense HOM05D000158 ORTHO05D002858 2.1e-08 63.9 112 35.7
Nitab4.5_0001831g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.7e-08 63.5 91 45.1
TPR.G1896 Trifolium pratense HOM05D001145 ORTHO05D008176 2.7e-08 63.5 107 43.9
arahy.Tifrunner.gnm1.ann1.39JP8F Arachis hypogaea HOM05D000158 ORTHO05D000197 3.5e-08 63.2 112 33.0
arahy.Tifrunner.gnm1.ann1.4EM99Z Arachis hypogaea HOM05D000158 ORTHO05D000197 3.5e-08 63.2 112 33.0
arahy.Tifrunner.gnm1.ann1.CX12M5 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.5e-08 63.2 128 32.0
arahy.Tifrunner.gnm1.ann1.GCX1C5 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.5e-08 63.2 100 39.0
arahy.Tifrunner.gnm1.ann1.W4MS58 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.5e-08 63.2 100 39.0
Lj2g0010792 Lotus japonicus HOM05D000158 ORTHO05D000197 3.5e-08 63.2 132 36.4
Lj2g0025940 Lotus japonicus HOM05D000158 ORTHO05D000197 3.5e-08 63.2 121 35.5
TPR.G33026 Trifolium pratense HOM05D000158 ORTHO05D002858 4.6e-08 62.8 157 29.3
TPR.G811 Trifolium pratense HOM05D000158 ORTHO05D002858 4.6e-08 62.8 153 34.0
Nitab4.5_0002080g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.0e-08 62.4 128 33.6
Nitab4.5_0010129g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.0e-08 62.4 75 42.7
arahy.Tifrunner.gnm1.ann1.M2MFDB Arachis hypogaea HOM05D000158 ORTHO05D000197 7.8e-08 62.0 112 32.1
arahy.Tifrunner.gnm1.ann1.X0U8Y0 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.0e-07 61.6 100 38.0
Lj1g0013168 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-07 61.2 122 35.2
Lj1g0013324 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-07 61.2 122 35.2
Lj1g0016672 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-07 61.2 132 34.8
Lj1g0019916 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-07 61.2 122 35.2
Lj3g0017745 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-07 61.2 122 35.2
Lj5g0004453 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-07 61.2 122 35.2
Lj6g0019227 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-07 61.2 172 32.6
Lj3g0009331 Lotus japonicus HOM05D000158 ORTHO05D000197 1.7e-07 60.8 122 35.2
Lj3g0014470 Lotus japonicus HOM05D000158 ORTHO05D000197 1.7e-07 60.8 122 35.2
Glyma.20G059900 Glycine max HOM05D000158 ORTHO05D000197 3.0e-07 60.1 150 28.0
Lj3g0008836 Lotus japonicus HOM05D000158 ORTHO05D000197 3.0e-07 60.1 164 31.1
Thhalv10005523m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 3.9e-07 59.7 145 30.3
TPR.G1870 Trifolium pratense HOM05D000158 ORTHO05D000197 3.9e-07 59.7 145 32.4
arahy.Tifrunner.gnm1.ann1.R93T63 Arachis hypogaea HOM05D000158 ORTHO05D002858 5.0e-07 59.3 133 29.3
arahy.Tifrunner.gnm1.ann1.UR70RB Arachis hypogaea HOM05D000158 ORTHO05D000197 5.0e-07 59.3 115 34.8
Nitab4.5_0012357g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.0e-07 59.3 92 38.0
Thhalv10009827m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 6.6e-07 58.9 116 31.9
Lj1g0002293 Lotus japonicus HOM05D000158 ORTHO05D000197 6.6e-07 58.9 132 33.3
Glyma.05G072900 Glycine max HOM05D000158 ORTHO05D000197 8.6e-07 58.5 150 28.0
Glyma.11G160800 Glycine max HOM05D000158 ORTHO05D000197 8.6e-07 58.5 150 28.0
Lj1g0015392 Lotus japonicus HOM05D000158 ORTHO05D000197 8.6e-07 58.5 132 33.3
Lj2g0004387 Lotus japonicus HOM05D000158 ORTHO05D000197 8.6e-07 58.5 132 33.3
Lj2g0025380 Lotus japonicus HOM05D000158 ORTHO05D000197 8.6e-07 58.5 132 33.3
Lj4g0011178 Lotus japonicus HOM05D000158 ORTHO05D000197 8.6e-07 58.5 132 33.3
LjContig00080g0010393 Lotus japonicus HOM05D000158 ORTHO05D000197 8.6e-07 58.5 132 33.3
LjContig00506g0000245 Lotus japonicus HOM05D000158 ORTHO05D000197 8.6e-07 58.5 132 33.3
TPR.G36476 Trifolium pratense HOM05D000158 ORTHO05D000197 8.6e-07 58.5 100 40.0
arahy.Tifrunner.gnm1.ann1.0IRR4S Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 58.2 150 26.7
arahy.Tifrunner.gnm1.ann1.756TEX Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 58.2 100 38.0
arahy.Tifrunner.gnm1.ann1.8102HM Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 58.2 100 38.0
arahy.Tifrunner.gnm1.ann1.CYG1GV Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 58.2 116 31.9
arahy.Tifrunner.gnm1.ann1.JP535L Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 58.2 100 38.0
arahy.Tifrunner.gnm1.ann1.SEYZ0I Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 58.2 100 38.0
arahy.Tifrunner.gnm1.ann1.YL2BBV Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 58.2 112 34.8
Lj3g0020463 Lotus japonicus HOM05D000158 ORTHO05D000197 1.1e-06 58.2 132 33.3
Lj4g0017546 Lotus japonicus HOM05D000158 ORTHO05D000197 1.1e-06 58.2 132 33.3
arahy.Tifrunner.gnm1.ann1.18PYUZ Arachis hypogaea HOM05D000158 ORTHO05D000197 1.5e-06 57.8 112 32.1
arahy.Tifrunner.gnm1.ann1.7I5EIZ Arachis hypogaea HOM05D000158 ORTHO05D000197 1.5e-06 57.8 123 31.7
arahy.Tifrunner.gnm1.ann1.9Y4FQ2 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.5e-06 57.8 112 32.1
arahy.Tifrunner.gnm1.ann1.CEZ8VF Arachis hypogaea HOM05D000158 ORTHO05D000197 1.5e-06 57.8 108 34.3
Lj1g0004303 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-06 57.8 164 30.5
Lj1g0004876 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-06 57.8 121 33.9
Lj3g0021112 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-06 57.8 121 33.9
Lj5g0012305 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-06 57.8 132 32.6
LjContig00080g0019961 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-06 57.8 121 33.9
arahy.Tifrunner.gnm1.ann1.E95LYY Arachis hypogaea HOM05D000158 ORTHO05D000197 1.9e-06 57.4 157 26.8
arahy.Tifrunner.gnm1.ann1.I3DMP8 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.9e-06 57.4 100 38.0
arahy.Tifrunner.gnm1.ann1.I3V9I7 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.9e-06 57.4 116 31.9
arahy.Tifrunner.gnm1.ann1.W04P42 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.9e-06 57.4 100 38.0
Glyma.09G151100 Glycine max HOM05D000158 ORTHO05D001651 1.9e-06 57.4 132 30.3
arahy.Tifrunner.gnm1.ann1.N3555V Arachis hypogaea HOM05D000158 ORTHO05D000197 2.5e-06 57.0 100 37.0
TPR.G7233 Trifolium pratense HOM05D000158 ORTHO05D000197 3.3e-06 56.6 112 33.9
arahy.Tifrunner.gnm1.ann1.QGF57N Arachis hypogaea HOM05D000158 ORTHO05D000197 4.3e-06 56.2 112 32.1
Lj2g0026449 Lotus japonicus HOM05D000158 ORTHO05D000197 4.3e-06 56.2 132 33.3
Lj5g0015403 Lotus japonicus HOM05D000158 ORTHO05D000197 4.3e-06 56.2 131 31.3
arahy.Tifrunner.gnm1.ann1.1RY5L5 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.6e-06 55.8 105 33.3
arahy.Tifrunner.gnm1.ann1.DBG5DW Arachis hypogaea HOM05D000158 ORTHO05D000197 5.6e-06 55.8 105 33.3
arahy.Tifrunner.gnm1.ann1.G3IFC5 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.6e-06 55.8 114 32.5
arahy.Tifrunner.gnm1.ann1.GD7WFM Arachis hypogaea HOM05D000158 ORTHO05D000197 5.6e-06 55.8 105 33.3
arahy.Tifrunner.gnm1.ann1.JCQ008 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.6e-06 55.8 112 31.2
arahy.Tifrunner.gnm1.ann1.PEX7VM Arachis hypogaea HOM05D000158 ORTHO05D000197 5.6e-06 55.8 132 29.5
arahy.Tifrunner.gnm1.ann1.PJZ7B9 Arachis hypogaea HOM05D000158 ORTHO05D002858 5.6e-06 55.8 112 31.2
arahy.Tifrunner.gnm1.ann1.WYH1Q2 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.6e-06 55.8 100 37.0
CiPaw.04G143100 Carya illinoinensis HOM05D000158 ORTHO05D000197 5.6e-06 55.8 127 29.9
Lj1g0020144 Lotus japonicus HOM05D000158 ORTHO05D000197 5.6e-06 55.8 133 33.1
Lj6g0006038 Lotus japonicus HOM05D000158 ORTHO05D000197 7.3e-06 55.5 131 32.8
arahy.Tifrunner.gnm1.ann1.9F14AA Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-06 55.1 112 31.2
arahy.Tifrunner.gnm1.ann1.I9EK5P Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-06 55.1 112 31.2
arahy.Tifrunner.gnm1.ann1.N6DBBJ Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-06 55.1 112 31.2
arahy.Tifrunner.gnm1.ann1.N7R8CX Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-06 55.1 112 31.2
arahy.Tifrunner.gnm1.ann1.VQ2QYT Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-06 55.1 127 30.7
Manes.07G056008 Manihot esculenta HOM05D000158 ORTHO05D000197 9.5e-06 55.1 173 29.5
Nitab4.5_0000002g0370 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.5e-06 55.1 57 49.1
PGSC0003DMG400041227 Solanum tuberosum HOM05D016461 ORTHO05D017121 9.5e-06 55.1 104 38.5


User provided reference genes

Program Settings