Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 4.0e-154 548.1 287 100.0
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 4.0e-114 415.2 296 80.1
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 6.4e-112 407.9 291 79.4
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 3.2e-111 405.6 291 79.0
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 3.8e-80 302.4 304 61.5
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 3.6e-54 216.1 279 52.3
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 5.1e-53 212.2 281 51.6
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 4.8e-51 205.7 280 47.9
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.2e-49 201.1 236 61.0
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.7e-48 197.2 297 46.5
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 2.5e-47 193.4 280 50.7
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 1.6e-46 190.7 315 46.3
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 3.6e-46 189.5 278 50.7
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 3.9e-45 186.0 291 47.8
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 1.1e-44 184.5 269 47.6
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 2.0e-44 183.7 293 45.1
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 2.6e-44 183.3 288 45.8
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 2.6e-44 183.3 296 46.3
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 4.4e-44 182.6 284 46.8
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 5.7e-44 182.2 295 45.4
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 3.7e-43 179.5 302 46.4
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.4e-42 177.6 297 44.8
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.8e-42 177.2 299 44.5
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.8e-42 177.2 302 44.7
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.1e-42 176.4 299 44.1
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 4.1e-42 176.0 253 50.2
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 4.1e-42 176.0 245 48.2
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 4.1e-42 176.0 289 46.0
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.2e-41 174.5 300 44.3
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 1.6e-41 174.1 269 46.8
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 5.9e-41 172.2 300 43.7
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 1.0e-40 171.4 296 44.6
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.8e-40 169.5 250 47.2
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 3.8e-40 169.5 254 48.0
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 5.0e-40 169.1 250 47.2
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.1e-39 167.9 286 42.0
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 1.1e-39 167.9 296 42.6
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 4.2e-39 166.0 269 44.2
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 9.4e-39 164.9 214 49.1
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 9.4e-39 164.9 173 56.1
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.6e-38 164.1 149 60.4
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 3.6e-38 162.9 304 43.1
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.7e-38 162.5 246 48.0
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 4.7e-38 162.5 304 42.8
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 6.1e-38 162.2 307 43.0
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 6.1e-38 162.2 246 47.2
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 1.0e-37 161.4 342 38.9
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 3.0e-37 159.8 292 41.4
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.2e-36 157.9 249 45.0
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 4.4e-36 156.0 275 43.6
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 7.5e-36 155.2 257 45.1
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 7.5e-36 155.2 304 42.1
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 9.7e-36 154.8 239 42.3
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 1.3e-35 154.5 257 42.0
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 1.3e-35 154.5 326 38.3
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 1.7e-35 154.1 333 39.0
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 2.2e-35 153.7 250 44.4
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 3.7e-35 152.9 282 40.8
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 4.8e-35 152.5 283 38.2
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 4.8e-35 152.5 302 39.7
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 4.8e-35 152.5 257 43.6
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 6.3e-35 152.1 262 42.7
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.4e-34 150.2 301 39.5
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 5.3e-34 149.1 259 44.0
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 5.3e-34 149.1 259 44.0
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 1.6e-33 147.5 268 43.3
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 2.0e-33 147.1 285 43.5
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 3.5e-33 146.4 245 43.3
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 3.5e-33 146.4 245 43.3
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.5e-33 146.0 245 43.3
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 5.9e-33 145.6 165 57.0
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.9e-33 145.6 294 42.9
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 7.7e-33 145.2 250 46.8
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.3e-32 144.4 268 42.2
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.3e-32 144.4 268 42.2
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.3e-32 144.4 268 42.2
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 2.9e-32 143.3 271 40.6
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.8e-32 142.9 151 57.0
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 1.1e-31 141.4 289 40.5
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 2.5e-31 140.2 238 45.0
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 5.5e-31 139.0 289 40.1
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 1.2e-30 137.9 230 47.4
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 1.2e-30 137.9 291 41.2
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.6e-30 137.5 267 41.2
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 2.1e-30 137.1 241 43.2
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.0e-29 134.8 292 41.1
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 1.4e-29 134.4 243 43.2
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 3.0e-29 133.3 269 41.3
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 6.8e-29 132.1 220 46.8
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 2.2e-27 127.1 217 42.4
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 1.6e-25 120.9 279 38.0
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.6e-25 120.9 191 47.6
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.6e-25 120.9 322 35.7
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 2.0e-25 120.6 297 38.4
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 2.0e-25 120.6 332 35.2
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 5.9e-25 119.0 280 35.7
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 7.7e-25 118.6 210 40.0
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 7.7e-25 118.6 133 54.1
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 1.0e-24 118.2 296 36.1
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.7e-24 117.5 183 45.4
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.3e-24 117.1 203 43.8
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 2.9e-24 116.7 264 36.4
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 1.1e-23 114.8 307 36.2
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 1.9e-23 114.0 255 38.0
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 2.5e-23 113.6 211 39.8
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 7.2e-23 112.1 259 35.9
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.1e-22 110.5 130 51.5
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 6.1e-22 109.0 272 35.3
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.8e-21 107.5 90 67.8
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 5.2e-21 105.9 210 39.5
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 1.5e-20 104.4 176 43.8
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 2.6e-20 103.6 211 40.3
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 3.7e-19 99.8 168 41.1
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 4.5e-17 92.8 222 38.7
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 6.6e-16 89.0 90 61.1
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 5.6e-15 85.9 60 71.7
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.8e-12 75.9 69 60.9
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 9.8e-12 75.1 179 37.4
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.4e-10 71.2 61 60.7
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 4.3e-07 59.7 51 58.8


User provided reference genes

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