Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 6.6e-196 687.6 451 100.0
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 1.6e-181 639.8 451 78.3
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 2.7e-165 585.9 449 78.0
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 7.6e-160 567.8 449 76.8
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 3.9e-132 475.7 436 61.5
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 6.7e-132 474.9 450 57.1
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 1.3e-130 470.7 436 60.8
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 3.2e-126 456.1 437 64.8
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 3.6e-125 452.6 437 56.1
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 1.5e-123 447.2 450 63.6
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 8.2e-122 441.4 415 57.8
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.7e-119 433.7 425 55.8
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 9.4e-118 427.9 445 54.6
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 1.6e-117 427.2 438 53.0
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.7e-117 425.6 438 54.3
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 7.9e-117 424.9 438 58.0
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 5.7e-115 418.7 434 57.4
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 3.8e-111 406.0 445 60.7
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 6.5e-111 405.2 452 50.0
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 1.1e-110 404.4 437 63.4
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 5.5e-110 402.1 445 49.9
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 7.2e-110 401.7 438 50.2
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 2.7e-109 399.8 437 62.2
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 4.7e-109 399.1 376 56.4
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 4.7e-109 399.1 445 49.2
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 6.1e-109 398.7 437 65.0
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 1.0e-108 397.9 377 56.8
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 1.8e-108 397.1 434 50.0
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 6.7e-108 395.2 437 55.1
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 2.6e-104 383.3 437 48.7
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 5.9e-104 382.1 543 44.2
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 1.0e-103 381.3 437 49.2
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 6.5e-103 378.6 433 51.3
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 1.5e-102 377.5 446 47.1
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.6e-101 374.0 445 58.7
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 6.1e-101 372.1 437 46.7
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 1.0e-100 371.3 448 57.1
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 2.3e-100 370.2 437 47.1
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.2e-100 369.0 328 60.7
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 2.6e-99 366.7 447 50.6
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 2.2e-98 363.6 431 47.3
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 6.3e-98 362.1 442 47.5
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 6.3e-98 362.1 441 45.8
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 1.6e-96 357.5 433 49.7
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 5.9e-96 355.5 438 46.6
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 3.8e-95 352.8 439 44.2
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 3.8e-95 352.8 444 43.5
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 6.5e-95 352.1 438 44.5
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 1.9e-94 350.5 369 56.6
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 4.2e-94 349.4 438 50.2
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 5.5e-94 349.0 439 44.0
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 9.4e-94 348.2 373 49.6
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 9.4e-94 348.2 436 44.0
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 2.7e-93 346.7 247 68.4
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 4.0e-92 342.8 473 49.7
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 1.7e-90 337.4 425 43.8
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 1.7e-90 337.4 437 42.8
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 2.2e-90 337.0 464 41.4
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 2.8e-90 336.7 439 43.1
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 8.3e-90 335.1 436 48.2
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 4.5e-88 329.3 438 41.6
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 4.5e-88 329.3 438 43.2
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 4.5e-88 329.3 439 45.6
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.0e-87 328.2 438 45.0
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 2.3e-87 327.0 444 42.1
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.5e-86 323.6 436 42.0
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 2.5e-86 323.6 442 44.1
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 5.5e-86 322.4 439 43.3
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 1.6e-85 320.9 438 41.1
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 3.6e-85 319.7 435 43.0
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 6.1e-85 318.9 436 45.6
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 1.5e-83 314.3 447 41.4
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.5e-83 314.3 376 54.3
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.7e-82 310.8 458 45.0
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 2.4e-81 307.0 445 41.8
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 2.4e-81 307.0 441 42.0
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 4.1e-81 306.2 376 53.7
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.5e-80 302.8 463 43.2
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 7.8e-80 302.0 545 37.4
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 1.3e-79 301.2 463 39.7
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 1.3e-79 301.2 454 40.7
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 1.3e-79 301.2 436 47.0
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 1.1e-78 298.1 435 45.5
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 1.1e-78 298.1 441 49.2
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 1.9e-78 297.4 377 44.8
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 4.3e-78 296.2 454 40.1
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 4.3e-78 296.2 454 40.1
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 5.6e-78 295.8 251 58.2
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 6.1e-77 292.4 496 37.5
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 8.0e-77 292.0 434 38.2
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 8.0e-77 292.0 415 43.4
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.8e-76 290.8 438 41.3
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 1.8e-76 290.8 428 44.2
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 4.0e-76 289.7 434 40.8
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 1.2e-75 288.1 375 44.5
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 3.4e-75 286.6 457 41.1
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 2.9e-74 283.5 436 37.4
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 8.3e-74 282.0 436 37.4
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 7.8e-72 275.4 244 57.0
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 2.3e-71 273.9 442 40.3
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 1.5e-70 271.2 352 41.8
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 3.3e-70 270.0 438 38.8
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 7.3e-70 268.9 344 50.0
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 4.7e-69 266.2 366 43.2
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 5.2e-68 262.7 254 52.4
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.2e-66 257.3 415 39.3
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 1.2e-64 251.5 344 54.7
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 7.8e-64 248.8 465 35.3
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 1.4e-60 238.0 251 48.2
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 2.3e-60 237.3 220 53.2
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 4.9e-58 229.6 442 32.8
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 8.3e-58 228.8 457 33.9
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 4.1e-57 226.5 251 50.2
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 1.6e-56 224.6 311 43.7
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 6.0e-56 222.6 206 54.4
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 7.8e-56 222.2 422 37.0
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 1.7e-55 221.1 342 38.3
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 6.6e-55 219.2 218 52.3
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.5e-51 208.0 247 40.9
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 3.4e-51 206.8 436 37.6
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 2.9e-42 177.2 380 31.8
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 1.9e-41 174.5 206 45.6
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 1.7e-39 167.9 307 35.2
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.2e-35 155.2 380 29.5
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 7.6e-35 152.5 159 49.1
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 2.2e-34 151.0 339 28.6
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 1.2e-32 145.2 374 31.6
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 3.5e-32 143.7 355 31.0
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 1.0e-31 142.1 204 37.3
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 6.2e-29 132.9 77 89.6
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 6.9e-28 129.4 215 40.9
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 1.2e-27 128.6 220 39.1
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 1.5e-27 128.3 247 33.6
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.6e-27 127.5 424 26.4
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.9e-26 124.0 99 62.6
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.9e-26 123.2 99 62.6
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.2e-25 120.6 98 62.2
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 7.9e-24 115.9 79 83.5
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 1.9e-22 111.3 133 51.1
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 2.5e-22 110.9 185 40.0
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 7.4e-22 109.4 97 51.5
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 7.4e-22 109.4 377 29.7
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 2.9e-18 97.4 74 66.2
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 1.4e-17 95.1 141 41.8
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 5.7e-14 83.2 141 39.7
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 8.2e-13 79.3 206 26.7
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 1.1e-12 79.0 138 35.5
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 1.2e-11 75.5 84 40.5
MCO07G624 Micromonas commoda HOM05D004546 ORTHO05D005419 2.5e-09 67.8 155 28.4
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 5.5e-09 66.6 175 25.7
Actinidia39037 Actinidia chinensis HOM05D004546 ORTHO05D005419 7.2e-09 66.2 84 44.0
Cre01.g008450 Chlamydomonas reinhardtii HOM05D004546 ORTHO05D005419 7.2e-09 66.2 183 29.5
PRCOL_00002550 Prasinoderma coloniale HOM05D004546 ORTHO05D005419 6.1e-08 63.2 179 24.6
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.1e-08 63.2 68 52.9
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 7.4e-06 56.2 105 33.3


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