Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.7e-48 195.7 98 100.0
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.3e-45 186.0 98 91.8
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.3e-45 186.0 98 91.8
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 4.3e-44 181.0 98 90.8
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 5.7e-44 180.6 98 90.8
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 3.4e-41 171.4 98 82.7
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 4.5e-41 171.0 96 88.5
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 5.9e-41 170.6 98 81.6
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.3e-40 169.5 97 81.4
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.7e-40 169.1 98 81.6
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.7e-40 169.1 98 82.7
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 7.2e-39 163.7 96 80.2
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 1.6e-38 162.5 98 76.5
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.1e-38 162.2 98 79.6
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 3.6e-38 161.4 97 81.4
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 4.6e-38 161.0 98 77.6
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 1.0e-37 159.8 97 77.3
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.0e-37 159.8 96 78.1
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.0e-37 159.8 101 76.2
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.0e-37 159.8 101 76.2
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.0e-37 159.8 101 76.2
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.0e-37 159.8 98 76.5
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.0e-37 159.8 96 78.1
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.4e-37 159.5 101 77.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.8e-37 159.1 97 80.4
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 2.3e-37 158.7 96 77.1
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.7e-37 157.1 101 74.3
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 6.7e-37 157.1 98 76.5
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 8.8e-37 156.8 98 75.5
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 8.8e-37 156.8 96 75.0
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.1e-36 156.4 98 77.6
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.1e-36 156.4 96 82.3
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.1e-36 156.4 97 78.4
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.5e-36 156.0 93 80.6
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 77.3
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 2.0e-36 155.6 98 78.6
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 2.0e-36 155.6 99 77.8
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 2.5e-36 155.2 96 76.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.5e-36 155.2 97 74.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 4.3e-36 154.5 97 75.3
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 4.3e-36 154.5 97 77.3
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.3e-36 154.5 95 80.0
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.3e-36 154.5 95 80.0
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 4.3e-36 154.5 95 80.0
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 4.3e-36 154.5 96 77.1
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.3e-35 152.9 97 75.3
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.7e-35 152.5 97 74.2
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.7e-35 152.5 95 72.6
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 2.2e-35 152.1 91 74.7
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 2.2e-35 152.1 97 75.3
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.8e-35 151.8 97 77.3
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 4.8e-35 151.0 96 76.0
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 4.8e-35 151.0 89 79.8
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 75.0
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 8.2e-35 150.2 125 63.2
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 77.9
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.1e-34 149.8 97 73.2
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 91 76.9
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.8e-34 149.1 98 75.5
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 3.1e-34 148.3 96 70.8
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 4.1e-34 147.9 98 70.4
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 6.9e-34 147.1 97 72.2
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 9.1e-34 146.7 95 75.8
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.2e-33 146.4 98 74.5
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.2e-33 146.4 97 70.1
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 1.5e-33 146.0 97 71.1
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.5e-33 146.0 95 69.5
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.0e-33 145.6 91 78.0
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 2.6e-33 145.2 87 80.5
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 4.5e-33 144.4 98 69.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 4.5e-33 144.4 98 72.4
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 4.5e-33 144.4 103 68.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 5.9e-33 144.1 98 71.4
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 7.7e-33 143.7 98 70.4
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 7.7e-33 143.7 98 70.4
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 7.7e-33 143.7 98 70.4
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 7.7e-33 143.7 98 70.4
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 7.7e-33 143.7 94 76.6
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 7.7e-33 143.7 91 71.4
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.3e-32 142.9 98 71.4
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.7e-32 142.5 98 69.4
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.7e-32 142.5 98 67.3
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.7e-32 142.5 94 70.2
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 3.8e-32 141.4 98 70.4
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 6.5e-32 140.6 98 69.4
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 2.5e-31 138.7 87 75.9
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.5e-31 138.7 104 68.3
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 7.2e-31 137.1 80 82.5
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.2e-30 136.3 97 72.2
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.6e-30 136.0 89 76.4
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 3.6e-30 134.8 80 81.2
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 7.9e-30 133.7 80 77.5
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.0e-29 133.3 92 69.6
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.3e-29 132.1 92 69.6
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 2.3e-29 132.1 92 68.5
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.3e-29 132.1 92 69.6
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 3.0e-29 131.7 92 68.5
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 5.1e-29 131.0 93 71.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 8.8e-29 130.2 92 67.4
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.3e-28 128.3 79 74.7
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 5.7e-28 127.5 79 77.2
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 5.7e-28 127.5 92 63.0
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 3.5e-25 118.2 84 66.7
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.0e-24 116.7 81 65.4
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.3e-24 116.3 105 61.9
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 6.1e-22 107.5 90 60.0
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.0e-21 106.7 62 82.3
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 4.0e-21 104.8 79 59.5
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.1e-18 96.7 72 62.5
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 2.0e-17 92.4 90 50.0
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 2.6e-17 92.0 94 51.1
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 5.9e-17 90.9 115 45.2
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 5.5e-15 84.3 86 50.0
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.2e-11 72.4 46 67.4
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 3.7e-11 71.6 74 47.3
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 6.3e-11 70.9 66 56.1
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 1.6e-09 66.2 41 80.5
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 6.5e-08 60.8 37 67.6


User provided reference genes

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