Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 6.2e-52 207.2 108 100.0
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 2.9e-33 145.2 108 73.1
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 6.7e-30 134.0 101 68.3
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-30 134.0 108 63.9
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 1.5e-29 132.9 96 74.0
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 4.3e-29 131.3 104 67.3
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 6.9e-27 124.0 108 62.0
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.0e-25 120.2 108 58.3
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 8.5e-25 117.1 108 59.3
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.5e-25 117.1 115 58.3
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-24 114.4 108 58.3
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 7.2e-24 114.0 82 73.2
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-23 112.8 104 59.6
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 2.3e-22 109.0 69 78.3
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-22 108.6 115 53.9
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.7e-22 107.5 108 57.4
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.7e-21 103.6 98 55.1
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-20 101.3 108 56.5
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.3e-20 100.9 109 54.1
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-20 100.5 122 50.0
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 1.4e-19 99.8 115 51.3
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-19 99.4 115 53.0
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-19 99.0 104 54.8
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-18 95.9 104 53.8
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 3.4e-18 95.1 68 70.6
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-18 95.1 115 48.7
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-18 94.7 108 49.1
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 5.9e-18 94.4 93 52.7
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-17 92.0 115 49.6
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.0e-17 91.3 108 48.1
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 8.5e-17 90.5 87 54.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-16 90.1 80 60.0
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.5e-16 87.8 89 64.0
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-16 87.0 109 47.7
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.6e-15 86.3 115 46.1
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-15 85.1 102 51.0
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-14 83.2 95 51.6
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-14 82.4 102 50.0
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.2e-14 81.3 82 53.7
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 8.8e-14 80.5 63 63.5
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-13 79.7 124 42.7
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.3e-13 78.6 60 65.0
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.7e-13 77.0 115 44.3
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-12 74.7 78 47.4
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-12 74.7 97 46.4
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-11 73.6 111 42.3
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-11 73.6 58 62.1
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-11 72.0 90 40.0
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.3e-11 71.2 62 59.7
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-11 71.2 90 38.9
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.0e-11 70.9 83 43.4
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.0e-11 70.9 98 48.0
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-10 68.9 89 41.6
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-10 68.6 62 50.0
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-10 68.6 62 51.6
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 4.5e-10 68.2 63 57.1
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-10 68.2 58 46.6
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 5.9e-10 67.8 59 50.8
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-10 67.8 58 51.7
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-10 67.4 105 34.3
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-09 67.0 90 37.8
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.7e-09 66.2 61 50.8
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-09 66.2 59 49.2
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-09 65.9 57 49.1
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 2.9e-09 65.5 45 68.9
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.8e-09 65.1 75 44.0
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-08 63.5 55 49.1
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-08 63.2 45 60.0
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 9.4e-08 60.5 61 47.5
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-07 59.7 45 60.0
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-07 59.3 62 48.4
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.7e-07 58.9 82 39.0
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.7e-07 58.9 78 42.3
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.6e-07 58.5 57 49.1
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.6e-07 58.5 82 40.2
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.7e-07 58.2 45 60.0
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.1e-07 57.8 77 41.6
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 8.0e-07 57.4 47 55.3
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-06 56.6 45 55.6
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-06 56.6 45 55.6
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.3e-06 55.8 89 33.7
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 2.3e-06 55.8 64 42.2
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 2.3e-06 55.8 89 33.7
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.0e-06 55.5 81 38.3
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 4.0e-06 55.1 58 46.6
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 4.0e-06 55.1 62 43.5
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 4.0e-06 55.1 83 37.3
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.0e-06 55.1 82 39.0
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 5.2e-06 54.7 58 48.3
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 6.7e-06 54.3 71 40.8
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.7e-06 54.3 82 37.8
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-06 54.3 39 56.4


User provided reference genes

Program Settings