Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 4.2e-106 388.3 231 100.0
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 8.8e-88 327.4 233 82.8
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.3e-86 323.6 233 80.3
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 8.6e-83 310.8 231 83.5
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 8.6e-83 310.8 231 83.1
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.0e-75 287.3 233 76.0
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 1.7e-70 270.0 203 83.7
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.7e-62 243.4 188 72.3
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.7e-62 242.3 180 76.1
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 8.3e-62 241.1 190 72.6
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.4e-61 240.4 173 75.1
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 2.4e-61 239.6 184 72.3
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 5.4e-61 238.4 177 79.1
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 9.2e-61 237.7 174 75.9
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.1e-60 236.5 180 74.4
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 3.5e-60 235.7 177 73.4
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.7e-59 233.4 172 76.2
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 2.3e-59 233.0 175 72.6
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 2.3e-59 233.0 202 67.3
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 2.3e-59 233.0 171 74.9
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 3.9e-59 232.3 235 63.0
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 5.1e-59 231.9 178 73.6
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 8.6e-59 231.1 173 73.4
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 8.6e-59 231.1 183 72.1
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 8.6e-59 231.1 173 74.6
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.1e-58 230.7 173 76.3
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.5e-58 230.3 208 65.4
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 2.5e-58 229.6 174 74.1
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.5e-58 229.6 180 71.7
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 2.5e-58 229.6 180 71.7
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 2.5e-58 229.6 219 64.4
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 4.3e-58 228.8 233 64.8
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 5.6e-58 228.4 229 61.1
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 5.6e-58 228.4 220 62.3
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 9.5e-58 227.6 203 64.5
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 9.5e-58 227.6 173 74.0
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.2e-57 227.3 140 85.7
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.2e-57 227.3 175 72.0
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 1.2e-57 227.3 175 75.4
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.2e-57 227.3 175 75.4
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 1.6e-57 226.9 199 65.8
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.6e-57 226.9 212 64.2
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 2.1e-57 226.5 175 73.1
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 2.8e-57 226.1 209 64.6
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 2.8e-57 226.1 210 63.8
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 4.7e-57 225.3 219 60.7
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 6.2e-57 224.9 175 71.4
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 6.2e-57 224.9 198 63.6
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 6.2e-57 224.9 175 70.9
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 6.2e-57 224.9 136 88.2
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 8.1e-57 224.6 212 62.3
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 8.1e-57 224.6 199 65.3
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 8.1e-57 224.6 182 68.1
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 1.1e-56 224.2 173 72.8
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.1e-56 224.2 170 75.9
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.4e-56 223.8 176 71.6
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.4e-56 223.8 192 67.7
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.8e-56 223.4 213 63.4
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 1.8e-56 223.4 132 88.6
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.8e-56 223.4 210 61.9
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.8e-56 223.4 175 73.1
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.3e-56 223.0 175 78.3
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 2.3e-56 223.0 213 63.8
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 3.1e-56 222.6 132 90.2
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 4.0e-56 222.2 175 70.3
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 4.0e-56 222.2 176 70.5
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 5.2e-56 221.9 175 70.3
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 5.2e-56 221.9 190 68.4
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 6.8e-56 221.5 209 61.2
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 6.8e-56 221.5 209 61.2
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 8.9e-56 221.1 212 62.3
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 8.9e-56 221.1 234 59.8
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 1.2e-55 220.7 234 57.3
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.5e-55 220.3 173 68.2
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.0e-55 219.9 228 61.4
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 2.0e-55 219.9 173 68.2
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.6e-55 219.5 138 84.1
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 3.4e-55 219.2 192 69.8
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 4.4e-55 218.8 222 68.5
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 7.5e-55 218.0 134 84.3
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 7.5e-55 218.0 234 56.8
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.3e-54 217.2 181 74.0
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.7e-54 216.9 231 59.3
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 4.9e-54 215.3 143 79.0
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 4.9e-54 215.3 175 66.3
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 1.1e-53 214.2 123 90.2
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 1.9e-53 213.4 175 68.6
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 1.9e-53 213.4 162 73.5
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 2.7e-52 209.5 142 75.4
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 4.6e-52 208.8 182 68.7
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 4.6e-52 208.8 162 72.8
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 9.5e-50 201.1 150 76.7
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 9.5e-50 201.1 157 71.3
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.8e-49 199.5 159 73.6
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 6.2e-49 198.4 131 80.2
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 8.1e-49 198.0 121 83.5
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-48 197.2 130 79.2
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-48 197.2 130 79.2
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.2e-47 194.1 170 60.0
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 2.0e-47 193.4 127 79.5
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 2.0e-47 193.4 150 72.0
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 7.6e-47 191.4 180 63.3
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 1.6e-44 183.7 263 47.1
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 1.7e-43 180.3 175 57.1
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.7e-43 180.3 157 66.2
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 2.3e-43 179.9 143 64.3
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 6.6e-43 178.3 136 66.9
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 8.1e-41 171.4 149 73.2
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 2.6e-39 166.4 191 50.3
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 6.2e-33 145.2 141 51.8
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 4.2e-29 132.5 110 67.3
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 3.7e-25 119.4 72 80.6
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 8.1e-25 118.2 98 60.2
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.1e-24 117.9 170 42.4
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 5.8e-23 112.1 170 46.5
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 5.5e-21 105.5 135 41.5
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 7.1e-21 105.1 71 80.3
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 2.3e-19 100.1 101 58.4
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 1.9e-18 97.1 62 77.4
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 4.3e-18 95.9 71 74.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 5.1e-11 72.4 56 62.5


User provided reference genes

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