Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.5e-33 145.6 72 100.0
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 2.6e-30 134.8 72 90.3
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.6e-30 134.8 72 90.3
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.3e-29 132.5 72 88.9
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.3e-29 132.5 72 87.5
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.6e-27 125.6 69 87.0
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.3e-26 122.5 72 80.6
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 3.0e-26 121.3 68 83.8
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 3.0e-26 121.3 68 83.8
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 5.1e-26 120.6 69 82.6
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 79.2
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 8.7e-26 119.8 68 82.4
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.5e-25 119.0 69 81.2
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 76.4
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 2.5e-25 118.2 72 77.8
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 77.8
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 3.3e-25 117.9 72 76.4
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 4.3e-25 117.5 70 80.0
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 75.0
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 73.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 75.0
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 7.4e-25 116.7 72 76.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 7.4e-25 116.7 72 76.4
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 7.4e-25 116.7 72 76.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 9.6e-25 116.3 70 75.7
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.3e-24 115.9 68 77.9
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.3e-24 115.9 68 77.9
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 76.4
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 72.2
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 2.1e-24 115.2 70 77.1
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 73.6
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 75.0
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 75.0
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 75.0
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 75.0
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 75.0
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.8e-24 114.8 69 78.3
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 75.0
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 2.8e-24 114.8 71 74.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 2.8e-24 114.8 72 75.0
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 3.7e-24 114.4 70 77.1
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 3.7e-24 114.4 72 76.4
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.8e-24 114.0 68 77.9
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 6.2e-24 113.6 68 77.9
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 75.0
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 73.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 6.2e-24 113.6 72 76.4
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 73.6
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 8.2e-24 113.2 66 75.8
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 75.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 75.0
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 8.2e-24 113.2 64 78.1
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.4e-23 112.5 68 76.5
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 73.6
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 72.2
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.4e-23 111.7 73 75.3
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 2.4e-23 111.7 72 73.6
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.4e-23 111.7 72 73.6
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 4.0e-23 110.9 71 71.8
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 5.3e-23 110.5 65 76.9
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 6.9e-23 110.2 72 70.8
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 9.0e-23 109.8 65 76.9
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 9.0e-23 109.8 72 70.8
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.2e-22 109.4 71 70.4
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 2.0e-22 108.6 72 70.8
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.6e-22 108.2 72 69.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 5.8e-22 107.1 64 75.0
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 7.6e-22 106.7 69 69.6
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.0e-21 106.3 66 74.2
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.7e-21 105.5 61 82.0
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 2.2e-21 105.1 71 71.8
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 2.9e-21 104.8 85 63.5
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 3.8e-21 104.4 82 64.6
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 5.0e-21 104.0 75 70.7
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.9e-20 102.1 73 68.5
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 7.1e-20 100.1 70 70.0
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 2.1e-19 98.6 72 69.4
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.7e-19 98.2 68 67.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.0e-18 96.3 69 63.8
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.8e-18 95.5 97 54.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.3e-18 95.1 51 88.2
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 2.3e-18 95.1 70 64.3
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 3.0e-18 94.7 81 60.5
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.9e-18 94.4 69 66.7
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 6.7e-18 93.6 72 62.5
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 4.3e-17 90.9 70 60.0
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 5.7e-17 90.5 72 63.9
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 5.7e-17 90.5 52 82.7
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 4.8e-16 87.4 70 62.9
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 6.3e-16 87.0 131 41.2
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 8.2e-16 86.7 134 40.3
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.4e-15 85.1 61 60.7
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 2.2e-13 78.6 50 76.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.4e-12 75.9 68 57.4
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.0e-10 68.2 42 71.4
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 6.7e-10 67.0 42 71.4
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 2.0e-09 65.5 42 71.4
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.3e-09 64.7 39 74.4
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 5.7e-09 63.9 41 70.7
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 7.4e-09 63.5 35 80.0
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 7.4e-09 63.5 42 71.4
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 9.7e-09 63.2 166 30.1
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.7e-08 62.4 52 57.7
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 2.8e-08 61.6 41 68.3
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 3.7e-08 61.2 36 75.0
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 1.8e-07 58.9 42 64.3
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 3.1e-07 58.2 42 59.5
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.1e-07 58.2 39 64.1
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 4.1e-07 57.8 30 90.0
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 4.1e-07 57.8 31 83.9
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 6.9e-07 57.0 45 55.6
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.5e-06 55.8 45 55.6
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 2.6e-06 55.1 53 56.6
Hma1.2p1_0643F.1_g194720 Hydrangea macrophylla HOM05D006941 ORTHO05D008361 5.9e-06 53.9 30 83.3
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 7.7e-06 53.5 29 82.8


User provided reference genes

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