Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 4.2e-93 344.7 180 100.0
Solyc12g013540.2 Solanum lycopersicum HOM05D008538 ORTHO05D010142 2.8e-73 278.9 186 82.3
PGSC0003DMG403008565 Solanum tuberosum HOM05D008538 ORTHO05D010142 2.8e-73 278.9 186 82.3
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 5.3e-72 274.6 186 81.7
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.3e-57 226.9 185 71.9
Nitab4.5_0005141g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 4.1e-56 221.9 185 70.3
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 7.9e-52 207.6 185 63.2
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 1.1e-50 203.8 188 64.4
Peaxi162Scf00000g00508 Petunia axillaris HOM05D008538 ORTHO05D010142 1.7e-49 199.9 180 65.0
Nitab4.5_0001320g0090 Nicotiana tabacum HOM05D008538 ORTHO05D010142 3.7e-33 145.6 189 51.3
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 4.1e-32 142.1 94 81.9
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 5.7e-26 121.7 188 46.3
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 2.8e-25 119.4 194 44.3
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 5.4e-24 115.2 200 43.0
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 3.3e-21 105.9 187 43.9
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 2.8e-20 102.8 191 44.0
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 2.8e-20 102.8 187 42.8
Nitab4.5_0003395g0040 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.2e-18 97.4 82 62.2
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 2.3e-14 83.2 124 44.4
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 9.5e-13 77.8 147 42.9
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 2.8e-12 76.3 140 42.9
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 6.2e-12 75.1 187 35.8
HanXRQChr08g0234631 Helianthus annuus HOM05D008538 ORTHO05D010142 1.5e-10 70.5 124 43.5
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 3.4e-10 69.3 130 40.0
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 4.9e-09 65.5 130 42.3
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 4.9e-09 65.5 130 42.3
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 4.9e-09 65.5 130 42.3
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 1.1e-08 64.3 130 41.5
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 1.1e-08 64.3 135 40.0
Lj8C159G11 Lonicera japonica HOM05D008538 ORTHO05D010142 4.1e-08 62.4 208 31.2
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 4.1e-08 62.4 124 39.5
vmacro09554 Vaccinium macrocarpon HOM05D008538 ORTHO05D010142 5.4e-08 62.0 92 46.7
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 7.0e-08 61.6 133 37.6
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.6e-07 60.5 99 38.4
MSTRG.6852 Avicennia marina HOM05D008538 ORTHO05D010142 3.5e-07 59.3 114 38.6
QL08p018693 Quercus lobata HOM05D008538 ORTHO05D010142 4.6e-07 58.9 136 39.7


User provided reference genes

Program Settings