Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G132.16 Capsicum annuum HOM05D007418 ORTHO05D009419 5.4e-177 624.4 358 100.0
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 3.1e-92 342.8 221 81.0
CAN.G752.2 Capsicum annuum HOM05D007418 ORTHO05D009419 3.7e-85 319.3 216 77.3
Solyc01g044490.4 Solanum lycopersicum HOM05D007418 ORTHO05D009419 5.0e-82 308.9 225 72.9
Sopen01g018620 Solanum pennellii HOM05D007418 ORTHO05D009419 2.5e-81 306.6 225 72.4
Peaxi162Scf00005g00613 Petunia axillaris HOM05D007418 ORTHO05D009419 5.8e-62 242.3 178 72.5
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 1.3e-58 231.1 210 59.5
MSTRG.20939 Avicennia marina HOM05D007418 ORTHO05D009419 3.0e-58 229.9 208 57.7
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 1.5e-57 227.6 202 57.4
HanXRQChr01g0021361 Helianthus annuus HOM05D007418 ORTHO05D009419 1.5e-57 227.6 206 56.8
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 4.3e-57 226.1 199 58.8
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 2.8e-56 223.4 219 52.5
Migut.D02561 Erythranthe guttata HOM05D007418 ORTHO05D009419 1.4e-55 221.1 255 50.6
GSVIVG01025464001 Vitis vinifera HOM05D007418 ORTHO05D009419 4.6e-51 206.1 198 55.6
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 7.8e-51 205.3 200 56.0
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 1.0e-50 204.9 200 56.0
Oeu023704.1 Olea europaea HOM05D007418 ORTHO05D009419 4.3e-49 199.5 167 62.3
Lsat_1_v5_gn_1_67260 Lactuca sativa HOM05D007418 ORTHO05D009419 2.1e-48 197.2 199 53.8
Nitab4.5_0004630g0080 Nicotiana tabacum HOM05D007418 ORTHO05D009419 3.6e-48 196.4 154 67.5
Cc01_g03260 Coffea canephora HOM05D007418 ORTHO05D009419 8.1e-48 195.3 173 61.3
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 1.4e-47 194.5 199 52.3
AUR62019167 Chenopodium quinoa HOM05D007418 ORTHO05D009419 3.1e-47 193.4 195 51.8
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 4.0e-47 193.0 204 50.0
Cc01_g00020 Coffea canephora HOM05D007418 ORTHO05D009419 5.3e-47 192.6 167 62.3
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 5.3e-47 192.6 195 52.8
Gohir.D05G110400 Gossypium hirsutum HOM05D007418 ORTHO05D009419 2.9e-45 186.8 196 50.0
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 2.9e-45 186.8 196 50.0
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 3.8e-45 186.4 202 49.5
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 6.4e-45 185.7 196 49.5
ATR0737G157 Amborella trichopoda HOM05D007418 ORTHO05D009419 8.4e-45 185.3 195 51.3
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 8.4e-45 185.3 202 49.0
TAR369G1115 Trochodendron aralioides HOM05D007418 ORTHO05D009419 8.4e-45 185.3 209 51.2
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 3.2e-44 183.3 195 50.3
SGA_v2.0_scaffold6G03369 Striga asiatica HOM05D007418 ORTHO05D009419 7.1e-44 182.2 181 51.9
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 1.2e-43 181.4 198 48.0
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 1.2e-43 181.4 203 47.8
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 1.2e-43 181.4 198 47.5
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 1.2e-43 181.4 202 48.0
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 2.1e-43 180.6 198 47.5
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 2.1e-43 180.6 198 47.5
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 2.1e-43 180.6 198 47.5
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 2.1e-43 180.6 198 47.5
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 6.0e-43 179.1 198 48.5
AUR62040906 Chenopodium quinoa HOM05D007418 ORTHO05D009419 7.9e-43 178.7 180 51.7
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 1.3e-42 177.9 198 48.0
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 1.3e-42 177.9 198 47.5
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 1.8e-42 177.6 198 47.5
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 8.7e-42 175.3 200 49.0
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 2.5e-41 173.7 211 47.9
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 4.3e-41 172.9 198 47.0
ClCG03G014480 Citrullus lanatus HOM05D007418 ORTHO05D009419 4.3e-41 172.9 204 43.6
Atru.chr3.2092 Acer truncatum HOM05D007418 ORTHO05D009419 1.3e-40 171.4 195 47.2
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 4.8e-40 169.5 195 46.2
MELO3C029305.2 Cucumis melo HOM05D007418 ORTHO05D009419 1.1e-39 168.3 209 43.1
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 5.3e-39 166.0 198 44.9
CsaV3_1G041690 Cucumis sativus L. HOM05D007418 ORTHO05D009419 6.9e-39 165.6 209 42.6
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 1.2e-38 164.9 194 45.9
CANSAT11G2630 Cannabis sativa HOM05D007418 ORTHO05D009419 2.0e-38 164.1 205 43.9
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 2.6e-38 163.7 199 45.2
Mapoly0009s0101 Marchantia polymorpha HOM05D007418 ORTHO05D009419 5.8e-38 162.5 186 49.5
Nitab4.5_0002351g0010 Nicotiana tabacum HOM05D007418 ORTHO05D009419 9.9e-38 161.8 147 61.9
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 1.7e-37 161.0 209 41.6
Glyma.04G122600 Glycine max HOM05D007418 ORTHO05D009419 4.9e-37 159.5 218 39.9
Lj6g0008878 Lotus japonicus HOM05D007418 ORTHO05D009419 4.9e-37 159.5 210 42.4
DCAR_025361 Daucus carota HOM05D007418 ORTHO05D009419 6.4e-37 159.1 161 50.9
unitig_899.g15026 Utricularia gibba HOM05D007418 ORTHO05D009419 1.1e-36 158.3 148 55.4
RcHm_v2.0_Chr5g0083721 Rosa chinensis HOM05D007418 ORTHO05D009419 1.4e-36 157.9 207 39.6
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 1.9e-36 157.5 191 45.5
Sed0010168 Sechium edule HOM05D007418 ORTHO05D009419 4.2e-36 156.4 192 42.7
arahy.Tifrunner.gnm1.ann1.ZH41ZF Arachis hypogaea HOM05D007418 ORTHO05D009419 7.1e-36 155.6 210 40.0
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 7.1e-36 155.6 207 40.1
Cfa019012 Carpinus fangiana HOM05D000059 ORTHO05D000528 1.2e-35 154.8 203 43.8
Ca_16377_v3 Cicer arietinum L. HOM05D007418 ORTHO05D009419 1.2e-35 154.8 210 39.0
Phvul.001G269400 Phaseolus vulgaris HOM05D007418 ORTHO05D009419 2.1e-35 154.1 210 39.5
Prupe.6G003800 Prunus persica HOM05D007418 ORTHO05D009419 2.1e-35 154.1 198 42.4
VMungo0464G0510 Vigna mungo HOM05D007418 ORTHO05D009419 3.9e-34 149.8 218 38.5
CiPaw.13G176700 Carya illinoinensis HOM05D007418 ORTHO05D009419 1.5e-33 147.9 185 44.3
Medtr3g083530 Medicago truncatula HOM05D007418 ORTHO05D009419 1.5e-33 147.9 210 39.0
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 1.9e-33 147.5 198 43.4
Psat5g101120 Pisum sativum HOM05D007418 ORTHO05D009419 3.3e-33 146.7 210 40.0
TPR.G19319 Trifolium pratense HOM05D007418 ORTHO05D009419 3.3e-33 146.7 210 38.6
Lalb_Chr11g0075981 Lupinus albus HOM05D007418 ORTHO05D009419 1.3e-32 144.8 185 42.2
arahy.Tifrunner.gnm1.ann1.WR82LC Arachis hypogaea HOM05D007418 ORTHO05D009419 2.8e-32 143.7 278 34.2
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 2.4e-31 140.6 207 37.2
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 2.4e-31 140.6 207 37.7
MBI04_g37007_MAGBIO Magnolia biondii HOM05D007418 ORTHO05D009419 3.1e-31 140.2 199 43.2
vmacro04241 Vaccinium macrocarpon HOM05D007418 ORTHO05D009419 5.3e-31 139.4 332 33.1
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 1.2e-30 138.3 201 39.8
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 5.8e-30 136.0 185 44.3
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 5.8e-30 136.0 236 33.9
Sc06g0004180 Simmondsia chinensis HOM05D007418 ORTHO05D009419 4.6e-27 126.3 144 45.1
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 7.9e-27 125.6 103 61.2
Haze_07392 Corylus avellana HOM05D007418 ORTHO05D009419 1.0e-26 125.2 305 30.8
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 1.9e-25 120.9 166 43.4
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 2.5e-25 120.6 195 36.4
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 1.6e-24 117.9 198 36.9
Nitab4.5_0004630g0090 Nicotiana tabacum HOM05D007418 ORTHO05D009419 1.6e-19 101.3 68 76.5
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 1.4e-12 78.2 131 43.5
Rhsim13G0232600 Rhododendron simsii HOM05D007418 ORTHO05D009419 2.7e-11 73.9 88 46.6
FAN16G1782 Fragaria x ananassa HOM05D007418 ORTHO05D009419 3.6e-11 73.6 69 50.7
QL04p006930 Quercus lobata HOM05D007418 ORTHO05D009419 3.0e-10 70.5 115 37.4
SHI31291 Sapria himalayana HOM05D007418 ORTHO05D009419 1.1e-09 68.6 144 32.6
MD03G1004200 Malus domestica HOM05D007418 ORTHO05D009419 2.2e-08 64.3 184 27.2


User provided reference genes

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