Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 4.7e-71 271.2 146 100.0
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 7.3e-64 247.3 146 91.1
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 6.2e-63 244.2 147 89.1
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.1e-62 243.4 147 89.8
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 1.4e-62 243.0 147 88.4
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 2.0e-61 239.2 143 88.8
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 5.4e-59 231.1 146 84.2
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 7.9e-58 227.3 146 81.5
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 81.5
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.1
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 3.0e-57 225.3 146 81.5
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 2.5e-56 222.2 146 83.6
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 2.1e-55 219.2 146 79.5
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 2.1e-55 219.2 146 79.5
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.8e-55 218.8 146 80.1
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.8e-55 218.8 146 80.1
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.8e-55 218.8 146 80.1
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 3.7e-55 218.4 146 79.5
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 4.8e-55 218.0 146 80.8
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 4.8e-55 218.0 146 78.1
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 6.2e-55 217.6 146 80.8
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 8.1e-55 217.2 147 79.6
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 2.4e-54 215.7 146 78.1
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.4e-54 215.7 146 77.4
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.4e-54 215.7 146 77.4
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 4.0e-54 214.9 146 81.5
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 4.0e-54 214.9 147 78.9
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 5.3e-54 214.5 146 79.5
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 6.9e-54 214.2 146 78.8
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 6.9e-54 214.2 146 78.1
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.2e-53 213.4 147 80.3
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 1.2e-53 213.4 146 76.0
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 2.0e-53 212.6 147 78.2
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.0e-53 212.6 144 77.1
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 2.6e-53 212.2 146 78.1
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 3.4e-53 211.8 146 78.8
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 3.4e-53 211.8 147 78.2
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 4.5e-53 211.5 148 77.7
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 5.8e-53 211.1 149 77.9
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 5.8e-53 211.1 147 76.9
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 5.8e-53 211.1 146 78.8
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 9.9e-53 210.3 146 80.1
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 1.3e-52 209.9 146 77.4
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.7e-52 209.5 146 76.7
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 1.7e-52 209.5 146 78.1
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.7e-52 209.5 147 78.2
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.7e-52 209.5 147 78.2
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 1.7e-52 209.5 147 78.9
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 2.2e-52 209.1 146 74.7
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 2.2e-52 209.1 147 78.9
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 2.2e-52 209.1 147 78.2
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 2.2e-52 209.1 145 77.9
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 2.9e-52 208.8 146 77.4
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 2.9e-52 208.8 146 76.7
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.9e-52 208.8 147 78.9
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 3.8e-52 208.4 146 76.7
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 3.8e-52 208.4 147 77.6
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 4.9e-52 208.0 146 76.0
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 4.9e-52 208.0 144 76.4
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 4.9e-52 208.0 144 76.4
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 6.4e-52 207.6 147 78.2
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 8.4e-52 207.2 144 76.4
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 8.4e-52 207.2 147 78.2
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 8.4e-52 207.2 147 78.2
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.1e-51 206.8 144 75.7
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.1e-51 206.8 146 79.5
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 1.1e-51 206.8 144 75.7
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.1e-51 206.8 146 76.0
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 4.2e-51 204.9 146 75.3
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 4.2e-51 204.9 145 73.8
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 7.1e-51 204.1 147 76.2
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 7.1e-51 204.1 149 74.5
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.6e-50 203.0 147 75.5
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 6.0e-50 201.1 147 77.6
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 1.8e-49 199.5 146 75.3
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 1.8e-49 199.5 146 75.3
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 2.3e-49 199.1 137 78.8
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 2.3e-49 199.1 150 72.7
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 2.3e-49 199.1 150 72.7
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 7.4e-48 194.1 147 72.1
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 9.6e-48 193.7 147 73.5
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 9.6e-48 193.7 152 71.1
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.3e-47 193.4 149 71.8
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 1.6e-47 193.0 139 77.0
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 3.7e-47 191.8 155 71.6
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 3.7e-47 191.8 147 67.3
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 1.8e-46 189.5 147 72.8
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 4.0e-46 188.3 150 73.3
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 1.2e-45 186.8 115 83.5
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.7e-44 183.0 109 90.8
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.1e-43 180.3 153 66.7
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.4e-43 179.9 152 67.8
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 1.9e-43 179.5 154 67.5
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.2e-43 178.7 146 69.2
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 4.2e-43 178.3 157 65.0
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 5.5e-43 177.9 152 67.8
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 5.5e-43 177.9 150 68.0
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 1.2e-42 176.8 153 66.7
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.2e-42 176.8 146 69.2
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.6e-42 176.4 146 68.5
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 2.7e-42 175.6 149 64.4
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 3.5e-42 175.3 154 66.2
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 3.9e-41 171.8 147 66.7
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.1e-40 170.2 147 66.0
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.1e-38 163.7 105 81.0
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 1.8e-38 162.9 152 61.8
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 2.4e-38 162.5 140 65.7
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 2.4e-38 162.5 140 65.7
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 3.1e-38 162.2 112 80.4
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 2.0e-37 159.5 161 57.8
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 2.2e-36 156.0 139 64.7
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.1e-35 153.7 149 61.7
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 2.5e-35 152.5 148 56.8
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.6e-34 149.8 147 61.2
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.1e-34 149.4 139 65.5
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 6.7e-33 144.4 100 74.0
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 5.7e-32 141.4 146 58.2
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 7.4e-32 141.0 145 60.0
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 2.0e-29 132.9 132 56.8
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 2.9e-28 129.0 85 76.5
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.2e-27 125.2 103 68.0
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 4.2e-27 125.2 152 52.0
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 7.2e-27 124.4 88 76.1
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.2e-26 123.6 103 67.0
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 2.1e-26 122.9 151 49.7
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 3.0e-25 119.0 133 51.9
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 2.6e-21 105.9 166 45.8
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 5.5e-19 98.2 78 64.1
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 7.2e-19 97.8 92 57.6
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 1.2e-18 97.1 79 60.8
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.1e-18 94.7 71 67.6
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.1e-18 94.7 71 67.6
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 2.3e-17 92.8 79 55.7
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 3.9e-17 92.0 71 63.4
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 8.8e-17 90.9 69 60.9
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.6e-16 89.4 69 62.3
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.3e-16 89.0 69 62.3
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.4e-16 88.6 69 60.9
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 7.4e-16 87.8 148 38.5
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 2.8e-15 85.9 148 41.2
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 4.8e-15 85.1 144 42.4
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 5.9e-13 78.2 72 55.6
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.3e-12 77.0 72 52.8
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 2.7e-10 69.3 70 47.1
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 3.0e-09 65.9 72 47.2
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 4.4e-08 62.0 72 45.8
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 1.3e-07 60.5 51 60.8
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 4.8e-07 58.5 122 39.3
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 1.1e-06 57.4 83 36.1


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