Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G131.12 Capsicum annuum HOM05D009044 ORTHO05D011261 6.3e-64 247.3 126 100.0
CAN.G1690.1 Capsicum annuum HOM05D009044 ORTHO05D011261 4.6e-46 188.0 126 78.6
CAN.G577.5 Capsicum annuum HOM05D009044 ORTHO05D011261 4.6e-46 188.0 126 78.6
CAN.G78.3 Capsicum annuum HOM05D009044 ORTHO05D011261 6.0e-46 187.6 126 78.6
Sopen10g006300 Solanum pennellii HOM05D009044 ORTHO05D011261 4.4e-33 144.8 126 61.9
Nitab4.5_0012260g0010 Nicotiana tabacum HOM05D009044 ORTHO05D011261 3.5e-30 135.2 93 76.3
PGSC0003DMG402022238 Solanum tuberosum HOM05D009044 ORTHO05D011261 6.0e-30 134.4 111 64.9
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 1.7e-24 116.3 108 60.2
Cc00_g01620 Coffea canephora HOM05D009044 ORTHO05D011261 1.1e-18 97.1 112 43.8
Lalb_Chr00c21g0405861 Lupinus albus HOM05D009044 ORTHO05D011261 9.9e-17 90.5 131 39.7
Lalb_Chr00c24g0406991 Lupinus albus HOM05D009044 ORTHO05D011261 9.9e-17 90.5 131 39.7
EL10Ac5g11444 Beta vulgaris HOM05D009044 ORTHO05D011261 2.2e-16 89.4 124 46.8
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 2.2e-16 89.4 113 50.4
Peaxi162Scf00622g00015 Petunia axillaris HOM05D009044 ORTHO05D011261 2.9e-16 89.0 123 47.2
arahy.Tifrunner.gnm1.ann1.AMEH8M Arachis hypogaea HOM05D009044 ORTHO05D011261 4.2e-15 85.1 117 43.6
arahy.Tifrunner.gnm1.ann1.K6P20N Arachis hypogaea HOM05D009044 ORTHO05D011261 4.2e-15 85.1 117 43.6
arahy.Tifrunner.gnm1.ann1.TYE1TB Arachis hypogaea HOM05D009044 ORTHO05D011261 4.2e-15 85.1 117 43.6
arahy.Tifrunner.gnm1.ann1.ES8831 Arachis hypogaea HOM05D009044 ORTHO05D011261 7.1e-15 84.3 118 45.8
arahy.Tifrunner.gnm1.ann1.P3P6H5 Arachis hypogaea HOM05D009044 ORTHO05D002807 7.1e-15 84.3 118 45.8
arahy.Tifrunner.gnm1.ann1.4L1UA2 Arachis hypogaea HOM05D009044 ORTHO05D011261 1.2e-14 83.6 113 43.4
arahy.Tifrunner.gnm1.ann1.QUEV48 Arachis hypogaea HOM05D009044 ORTHO05D011261 3.5e-14 82.0 113 42.5
Nitab4.5_0004471g0160 Nicotiana tabacum HOM05D009044 ORTHO05D011261 4.6e-14 81.6 54 72.2
TPR.G10887 Trifolium pratense HOM05D009044 ORTHO05D011261 1.0e-13 80.5 110 43.6
CAN.G950.5 Capsicum annuum HOM05D009044 ORTHO05D011261 3.0e-13 79.0 104 44.2
CAN.G1321.8 Capsicum annuum HOM05D009044 ORTHO05D011261 1.1e-12 77.0 112 41.1
CAN.G584.15 Capsicum annuum HOM05D009044 ORTHO05D011261 1.1e-12 77.0 112 40.2
Psat6g067520 Pisum sativum HOM05D009044 ORTHO05D011261 9.6e-12 73.9 98 45.9
arahy.Tifrunner.gnm1.ann1.2Y9TRI Arachis hypogaea HOM05D009044 ORTHO05D011261 2.8e-11 72.4 93 45.2
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 3.6e-11 72.0 78 38.5
CAN.G1082.4 Capsicum annuum HOM05D009044 ORTHO05D011261 3.6e-11 72.0 112 38.4
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 1.1e-10 70.5 75 48.0
Migut.E01132 Erythranthe guttata HOM05D009044 ORTHO05D011261 5.8e-09 64.7 70 44.3
Psat4g178280 Pisum sativum HOM05D009044 ORTHO05D011261 2.9e-08 62.4 82 41.5
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 6.4e-08 61.2 83 44.6
Lsat_1_v5_gn_5_126261 Lactuca sativa HOM05D009044 ORTHO05D011261 1.2e-06 57.0 81 37.0
Lsat_1_v5_gn_6_67941 Lactuca sativa HOM05D009044 ORTHO05D011261 1.2e-06 57.0 81 37.0
Lsat_1_v5_gn_9_49181 Lactuca sativa HOM05D009044 ORTHO05D011261 1.2e-06 57.0 81 37.0
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 2.7e-06 55.8 68 45.6


User provided reference genes

Program Settings