Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1308.2 Capsicum annuum HOM05D009106 ORTHO05D010235 1.8e-81 305.8 152 100.0
Solyc02g065340.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.9e-62 242.7 155 77.4
Sopen02g015520 Solanum pennellii HOM05D009106 ORTHO05D010235 2.8e-58 228.8 155 74.2
PGSC0003DMG400043353 Solanum tuberosum HOM05D009106 ORTHO05D010235 9.4e-54 213.8 143 72.7
Nitab4.5_0000806g0040 Nicotiana tabacum HOM05D009106 ORTHO05D010235 1.4e-49 199.9 157 65.6
Sopen02g015510 Solanum pennellii HOM05D009106 ORTHO05D010235 5.9e-48 194.5 134 73.1
Nitab4.5_0005238g0010 Nicotiana tabacum HOM05D009106 ORTHO05D010235 1.0e-47 193.7 158 62.7
Peaxi162Scf00234g00222 Petunia axillaris HOM05D009106 ORTHO05D010235 9.4e-46 187.2 156 64.1
Peaxi162Scf01198g00214 Petunia axillaris HOM05D009106 ORTHO05D010235 1.4e-41 173.3 152 59.2
Peaxi162Scf00234g00219 Petunia axillaris HOM05D009106 ORTHO05D010235 3.1e-33 145.6 160 53.1
Peaxi162Scf00234g00218 Petunia axillaris HOM05D009106 ORTHO05D010235 1.7e-31 139.8 151 49.7
Peaxi162Scf01198g00315 Petunia axillaris HOM05D009106 ORTHO05D010235 1.1e-30 137.1 85 74.1
Nitab4.5_0005238g0020 Nicotiana tabacum HOM05D009106 ORTHO05D010235 2.1e-29 132.9 121 57.9
CAN.G1630.1 Capsicum annuum HOM05D009106 ORTHO05D010235 4.1e-25 118.6 117 53.8
CAN.G533.1 Capsicum annuum HOM05D009106 ORTHO05D010235 4.1e-25 118.6 108 56.5
CAN.G11.29 Capsicum annuum HOM05D009106 ORTHO05D010235 3.5e-24 115.5 83 66.3
Solyc02g081780.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 3.5e-24 115.5 171 39.2
Sopen02g015460 Solanum pennellii HOM05D009106 ORTHO05D010235 1.3e-23 113.6 115 52.2
PGSC0003DMG400045041 Solanum tuberosum HOM05D009106 ORTHO05D010235 2.9e-23 112.5 191 40.3
Solyc05g017740.1 Solanum lycopersicum HOM05D009106 ORTHO05D010235 1.1e-22 110.5 107 50.5
PGSC0003DMG400013106 Solanum tuberosum HOM05D009106 ORTHO05D010235 3.2e-22 109.0 119 52.1
Sopen02g026380 Solanum pennellii HOM05D009106 ORTHO05D010235 1.6e-21 106.7 69 66.7
Peaxi162Scf01198g00310 Petunia axillaris HOM05D009106 ORTHO05D010235 6.1e-21 104.8 120 47.5
PGSC0003DMG400013104 Solanum tuberosum HOM05D009106 ORTHO05D010235 1.4e-20 103.6 123 50.4
Nitab4.5_0000806g0020 Nicotiana tabacum HOM05D009106 ORTHO05D010235 2.3e-20 102.8 102 59.8
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 8.3e-18 94.4 95 56.8
Sopen05g014190 Solanum pennellii HOM05D009106 ORTHO05D010235 1.7e-15 86.7 60 60.0
Nitab4.5_0000806g0060 Nicotiana tabacum HOM05D000727 ORTHO05D010235 1.2e-13 80.5 51 68.6
Peaxi162Scf01198g00213 Petunia axillaris HOM05D000727 ORTHO05D000541 1.3e-10 70.5 47 63.8
Cc00_g11360 Coffea canephora HOM05D037937 ORTHO05D010235 2.4e-09 66.2 60 46.7
CAN.G1066.2 Capsicum annuum HOM05D009106 ORTHO05D010235 3.2e-09 65.9 71 47.9
Gohir.A02G160700 Gossypium hirsutum HOM05D000823 ORTHO05D000088 3.5e-08 62.4 87 35.6
Gohir.D03G019700 Gossypium hirsutum HOM05D000823 ORTHO05D010235 5.9e-08 61.6 138 30.4
Gorai.003G020400 Gossypium raimondii HOM05D000823 ORTHO05D010235 5.9e-08 61.6 138 30.4
Gohir.A02G160800 Gossypium hirsutum HOM05D000823 ORTHO05D010235 7.8e-08 61.2 138 29.7
Gohir.D03G019725 Gossypium hirsutum HOM05D000823 ORTHO05D010235 1.0e-07 60.8 57 43.9
Gorai.003G020600 Gossypium raimondii HOM05D000823 ORTHO05D010235 1.0e-07 60.8 57 43.9
Gorai.003G020700 Gossypium raimondii HOM05D000823 ORTHO05D000088 1.7e-07 60.1 57 45.6
Cc00_g18110 Coffea canephora HOM05D037937 ORTHO05D010235 1.5e-06 57.0 63 41.3
Dinv26758 Davidia involucrata HOM05D000823 ORTHO05D000088 3.3e-06 55.8 80 36.2
ECA234G0573 Erigeron canadensis HOM05D009784 ORTHO05D010235 9.5e-06 54.3 70 35.7


User provided reference genes

Program Settings