Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1305.25 Capsicum annuum HOM05D002152 ORTHO05D031610 1.1e-72 276.6 140 100.0
Nitab4.5_0000514g0150 Nicotiana tabacum HOM05D002152 ORTHO05D002737 1.4e-64 249.6 124 99.2
Nitab4.5_0002403g0040 Nicotiana tabacum HOM05D002152 ORTHO05D002737 1.4e-64 249.6 124 99.2
Solyc03g112910.3 Solanum lycopersicum HOM05D002152 ORTHO05D002737 5.4e-64 247.7 124 99.2
Sopen03g031990 Solanum pennellii HOM05D002152 ORTHO05D002737 5.4e-64 247.7 124 99.2
PGSC0003DMG400018148 Solanum tuberosum HOM05D002152 ORTHO05D002737 5.4e-64 247.7 124 99.2
Migut.I00003 Erythranthe guttata HOM05D002152 ORTHO05D002737 2.8e-60 235.3 125 93.6
SGA_v2.0_scaffold25G10837 Striga asiatica HOM05D002152 ORTHO05D002737 3.6e-60 235.0 125 94.4
MD06G1173300 Malus domestica HOM05D002152 ORTHO05D002737 4.7e-60 234.6 125 94.4
Oeu040833.2 Olea europaea HOM05D002152 ORTHO05D002737 1.8e-59 232.6 125 92.8
Rhsim12G0164700 Rhododendron simsii HOM05D002152 ORTHO05D002737 2.3e-59 232.3 125 92.8
SalBow5G3232 Salvia bowleyana HOM05D002152 ORTHO05D002737 4.0e-59 231.5 125 92.8
Prupe.5G172800 Prunus persica HOM05D002152 ORTHO05D002737 5.2e-59 231.1 125 92.8
MD14G1179800 Malus domestica HOM05D002152 ORTHO05D002737 8.9e-59 230.3 125 92.8
MSTRG.11460 Avicennia marina HOM05D002152 ORTHO05D002737 1.2e-58 229.9 125 92.0
CiPaw.12G026800 Carya illinoinensis HOM05D002152 ORTHO05D002737 1.2e-58 229.9 128 90.6
TAR622G1109 Trochodendron aralioides HOM05D002152 ORTHO05D002737 2.6e-58 228.8 125 92.0
Lj5A125G65 Lonicera japonica HOM05D002152 ORTHO05D002737 4.4e-58 228.0 125 92.8
Hund02746 Selenicereus undatus HOM05D002152 ORTHO05D002737 4.4e-58 228.0 125 90.4
COL.COLO4_30050 Corchorus olitorius HOM05D002152 ORTHO05D002737 7.5e-58 227.3 125 92.0
Cc04_g14200 Coffea canephora HOM05D002152 ORTHO05D002737 1.7e-57 226.1 125 90.4
Sabra15G0102000 Salix brachista HOM05D002152 ORTHO05D002737 1.7e-57 226.1 125 91.2
PGR044G0341 Punica granatum HOM05D002152 ORTHO05D002737 2.2e-57 225.7 125 90.4
Gohir.A12G274200 Gossypium hirsutum HOM05D002152 ORTHO05D002737 2.9e-57 225.3 125 91.2
vmacro16612 Vaccinium macrocarpon HOM05D002152 ORTHO05D002737 2.9e-57 225.3 125 89.6
FAN13G0225 Fragaria x ananassa HOM05D002152 ORTHO05D002737 3.7e-57 224.9 125 89.6
Manes.06G105400 Manihot esculenta HOM05D002152 ORTHO05D002737 3.7e-57 224.9 125 91.2
Oeu035995.2 Olea europaea HOM05D002152 ORTHO05D002737 3.7e-57 224.9 125 91.2
Cfa019139 Carpinus fangiana HOM05D002152 ORTHO05D002737 4.9e-57 224.6 128 89.8
Thecc.03G013200 Theobroma cacao HOM05D002152 ORTHO05D002737 6.4e-57 224.2 125 90.4
FvH4_5g05350 Fragaria vesca HOM05D002152 ORTHO05D002737 8.3e-57 223.8 125 89.6
FAN04G0030 Fragaria x ananassa HOM05D002152 ORTHO05D002737 8.3e-57 223.8 125 89.6
FAN18G0214 Fragaria x ananassa HOM05D002152 ORTHO05D002737 8.3e-57 223.8 125 89.6
FAN18G3166 Fragaria x ananassa HOM05D002152 ORTHO05D002737 8.3e-57 223.8 125 89.6
ClCG01G013170 Citrullus lanatus HOM05D002152 ORTHO05D002737 1.1e-56 223.4 124 90.3
Dinv38584 Davidia involucrata HOM05D002152 ORTHO05D002737 1.1e-56 223.4 125 89.6
Gohir.D12G274900 Gossypium hirsutum HOM05D002152 ORTHO05D002737 1.9e-56 222.6 125 90.4
Gorai.008G295400 Gossypium raimondii HOM05D002152 ORTHO05D002737 1.9e-56 222.6 125 90.4
Potri.015G077300 Populus trichocarpa HOM05D002152 ORTHO05D002737 1.9e-56 222.6 125 90.4
DCAR_026139 Daucus carota HOM05D002152 ORTHO05D002737 2.4e-56 222.2 125 89.6
Manes.14G065200 Manihot esculenta HOM05D002152 ORTHO05D002737 2.4e-56 222.2 125 90.4
RcHm_v2.0_Chr7g0193481 Rosa chinensis HOM05D002152 ORTHO05D002737 2.4e-56 222.2 125 88.8
TWI23G0205 Tripterygium wilfordii HOM05D002152 ORTHO05D002737 2.4e-56 222.2 125 89.6
Haze_07506 Corylus avellana HOM05D002152 ORTHO05D002737 3.2e-56 221.9 128 89.1
Dinv20647 Davidia involucrata HOM05D002152 ORTHO05D002737 3.2e-56 221.9 125 89.6
TAR374G0439 Trochodendron aralioides HOM05D002152 ORTHO05D002737 3.2e-56 221.9 125 88.8
Gorai.007G001600 Gossypium raimondii HOM05D002152 ORTHO05D002737 4.1e-56 221.5 125 90.4
Duzib205G1519 Durio zibethinus HOM05D002152 ORTHO05D002737 5.4e-56 221.1 125 89.6
Ciclev10018751m.g Citrus clementina HOM05D002152 ORTHO05D002737 7.1e-56 220.7 125 89.6
Nn4g22747 Nelumbo nucifera HOM05D002152 ORTHO05D002737 9.2e-56 220.3 125 90.4
Hma1.2p1_0176F.1_g077360 Hydrangea macrophylla HOM05D002152 ORTHO05D002737 1.2e-55 219.9 125 88.0
GSVIVG01007735001 Vitis vinifera HOM05D002152 ORTHO05D002737 1.2e-55 219.9 125 88.8
Aqoxy3G02917 Aquilegia oxysepala HOM05D002152 ORTHO05D002737 1.6e-55 219.5 125 88.0
MELO3C002267.2 Cucumis melo HOM05D002152 ORTHO05D002737 2.1e-55 219.2 124 88.7
CsaV3_1G008520 Cucumis sativus L. HOM05D002152 ORTHO05D002737 2.1e-55 219.2 124 88.7
Lj4g0026619 Lotus japonicus HOM05D002152 ORTHO05D002737 2.1e-55 219.2 124 87.9
Sc12g0005300 Simmondsia chinensis HOM05D002152 ORTHO05D002737 2.1e-55 219.2 125 88.8
Sabra12G0058400 Salix brachista HOM05D002152 ORTHO05D002737 2.7e-55 218.8 125 88.0
EL10Ac5g10740 Beta vulgaris HOM05D002152 ORTHO05D002737 3.5e-55 218.4 125 87.2
Atru.chr9.2484 Acer truncatum HOM05D002152 ORTHO05D002737 6.0e-55 217.6 126 88.9
Ah.02g110510 Amaranthus hybridus HOM05D002152 ORTHO05D002737 7.8e-55 217.2 125 88.0
arahy.Tifrunner.gnm1.ann1.048ZT0 Arachis hypogaea HOM05D002152 ORTHO05D002737 7.8e-55 217.2 125 84.8
arahy.Tifrunner.gnm1.ann1.5JT6XN Arachis hypogaea HOM05D002152 ORTHO05D002737 7.8e-55 217.2 125 84.8
ECA232G2073 Erigeron canadensis HOM05D002152 ORTHO05D002737 7.8e-55 217.2 125 88.0
Eucgr.K02840 Eucalyptus grandis HOM05D002152 ORTHO05D002737 1.3e-54 216.5 125 88.0
HanXRQChr09g0272171 Helianthus annuus HOM05D002152 ORTHO05D002737 1.7e-54 216.1 125 88.0
QL10p011489 Quercus lobata HOM05D002152 ORTHO05D002737 1.7e-54 216.1 125 87.2
AUR62008203 Chenopodium quinoa HOM05D002152 ORTHO05D002737 2.3e-54 215.7 125 86.4
Lalb_Chr07g0182761 Lupinus albus HOM05D002152 ORTHO05D002737 2.3e-54 215.7 125 86.4
Lsat_1_v5_gn_4_75160 Lactuca sativa HOM05D002152 ORTHO05D002737 3.0e-54 215.3 125 86.4
Sed0016918 Sechium edule HOM05D002152 ORTHO05D002737 3.0e-54 215.3 124 87.1
TWI39G0669 Tripterygium wilfordii HOM05D002152 ORTHO05D002737 3.0e-54 215.3 125 86.4
Carub.0007s0837 Capsella rubella HOM05D002152 ORTHO05D002737 3.9e-54 214.9 125 87.2
CARHR240110 Cardamine hirsuta HOM05D002152 ORTHO05D002737 3.9e-54 214.9 125 87.2
Glyma.17G089200 Glycine max HOM05D002152 ORTHO05D002737 3.9e-54 214.9 125 87.2
MBI16_g27091_MAGBIO Magnolia biondii HOM05D002152 ORTHO05D002737 3.9e-54 214.9 125 87.2
Phvul.009G178200 Phaseolus vulgaris HOM05D002152 ORTHO05D002737 5.1e-54 214.5 126 88.1
Potri.012G081600 Populus trichocarpa HOM05D002152 ORTHO05D002737 5.1e-54 214.5 125 86.4
THA.LOC104809842 Tarenaya hassleriana HOM05D002152 ORTHO05D002737 5.1e-54 214.5 125 86.4
Sed0020413 Sechium edule HOM05D002152 ORTHO05D002737 6.6e-54 214.2 132 84.1
AT4G32180 Arabidopsis thaliana HOM05D002152 ORTHO05D002737 1.1e-53 213.4 125 86.4
Glyma.06G182100 Glycine max HOM05D002152 ORTHO05D002737 1.9e-53 212.6 126 86.5
Glyma.13G146900 Glycine max HOM05D002152 ORTHO05D002737 1.9e-53 212.6 126 86.5
Hund09441 Selenicereus undatus HOM05D002152 ORTHO05D002737 1.9e-53 212.6 125 88.0
VMungo1309G0042 Vigna mungo HOM05D002152 ORTHO05D002737 1.9e-53 212.6 126 87.3
AL7G19670 Arabidopsis lyrata HOM05D002152 ORTHO05D002737 3.3e-53 211.8 125 85.6
AUR62030956 Chenopodium quinoa HOM05D002152 ORTHO05D002737 3.3e-53 211.8 125 84.8
PSO063G2576 Papaver somniferum HOM05D002152 ORTHO05D002737 3.3e-53 211.8 125 85.6
PSO832G2228 Papaver somniferum HOM05D002152 ORTHO05D002737 3.3e-53 211.8 125 85.6
Thhalv10024357m.g Eutrema salsugineum HOM05D002152 ORTHO05D002737 4.3e-53 211.5 125 85.6
BcaC09g52003 Brassica carinata HOM05D002152 ORTHO05D002737 5.6e-53 211.1 125 84.8
C01p06790 Brassica napus HOM05D002152 ORTHO05D002737 5.6e-53 211.1 125 84.8
BolC1t00673H Brassica oleracea HOM05D002152 ORTHO05D002737 5.6e-53 211.1 125 84.8
Aa31LG2G17750 Aethionema arabicum HOM05D002152 ORTHO05D002737 9.5e-53 210.3 125 84.8
VMungo1215G2790 Vigna mungo HOM05D002152 ORTHO05D002737 9.5e-53 210.3 124 84.7
BcaB03g12734 Brassica carinata HOM05D002152 ORTHO05D002737 1.2e-52 209.9 125 84.8
BcaC01g01035 Brassica carinata HOM05D002152 ORTHO05D002737 1.2e-52 209.9 125 84.8
A08p18320 Brassica napus HOM05D002152 ORTHO05D002737 1.2e-52 209.9 125 84.8
BolC3t21056H Brassica oleracea HOM05D002152 ORTHO05D002737 1.2e-52 209.9 125 84.8
BraA08t33789Z Brassica rapa HOM05D002152 ORTHO05D002737 1.2e-52 209.9 125 84.8
Sp7g29970 Schrenkiella parvula HOM05D002152 ORTHO05D002737 1.2e-52 209.9 125 84.8
A01p06160 Brassica napus HOM05D002152 ORTHO05D002737 1.6e-52 209.5 125 84.0
BraA01t00582Z Brassica rapa HOM05D002152 ORTHO05D002737 1.6e-52 209.5 125 84.0
HPP92_004847 Vanilla planifolia HOM05D002152 ORTHO05D002737 2.1e-52 209.1 126 82.5
Lsat_1_v5_gn_5_14761 Lactuca sativa HOM05D002152 ORTHO05D002737 3.6e-52 208.4 125 83.2
TPR.G25314 Trifolium pratense HOM05D002152 ORTHO05D002737 3.6e-52 208.4 126 85.7
Ca_16172_v3 Cicer arietinum L. HOM05D002152 ORTHO05D002737 4.7e-52 208.0 126 84.9
Medtr3g077740 Medicago truncatula HOM05D002152 ORTHO05D002737 4.7e-52 208.0 126 84.9
BcaNung03143 Brassica carinata HOM05D002152 ORTHO05D002737 6.2e-52 207.6 125 84.8
CANSAT80G0391 Cannabis sativa HOM05D002152 ORTHO05D002737 8.1e-52 207.2 125 84.8
Psat5g114960 Pisum sativum HOM05D002152 ORTHO05D002737 1.1e-51 206.8 126 84.9
ATR1091G022 Amborella trichopoda HOM05D002152 ORTHO05D002737 1.4e-51 206.5 126 84.1
arahy.Tifrunner.gnm1.ann1.00L7NP Arachis hypogaea HOM05D002152 ORTHO05D002737 1.4e-51 206.5 126 84.1
arahy.Tifrunner.gnm1.ann1.H1QDLV Arachis hypogaea HOM05D002152 ORTHO05D002737 1.4e-51 206.5 126 84.1
Lj1g0023141 Lotus japonicus HOM05D002152 ORTHO05D002737 3.1e-51 205.3 126 84.1
Phvul.003G200700 Phaseolus vulgaris HOM05D002152 ORTHO05D002737 1.2e-50 203.4 124 83.9
Lalb_Chr08g0236531 Lupinus albus HOM05D002152 ORTHO05D002737 3.4e-50 201.8 126 81.7
Lalb_Chr11g0071371 Lupinus albus HOM05D002152 ORTHO05D002737 5.8e-50 201.1 126 82.5
arahy.Tifrunner.gnm1.ann1.E99XLH Arachis hypogaea HOM05D002152 ORTHO05D031610 1.3e-49 199.9 126 81.7
vmacro16610 Vaccinium macrocarpon HOM05D002152 ORTHO05D002737 1.3e-49 199.9 120 82.5
Zm00001eb319630 Zea mays HOM05D002152 ORTHO05D002737 1.0e-46 190.3 126 77.8
SHI27718 Sapria himalayana HOM05D002152 ORTHO05D002737 1.3e-46 189.9 125 76.0
SalBow3G0703 Salvia bowleyana HOM05D002152 ORTHO05D002737 1.7e-46 189.5 125 80.8
Os09g0533100 Oryza sativa ssp. japonica HOM05D002152 ORTHO05D002737 6.6e-46 187.6 126 77.0
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 1.1e-45 186.8 123 76.4
Gohir.D11G000700 Gossypium hirsutum HOM05D002152 ORTHO05D002737 2.5e-45 185.7 125 80.0
Cfa012329 Carpinus fangiana HOM05D002152 ORTHO05D031610 7.3e-45 184.1 109 86.2
MBI10_g28015_MAGBIO Magnolia biondii HOM05D002152 ORTHO05D002737 1.4e-43 179.9 108 85.2
SMO259G0043 Selaginella moellendorffii HOM05D002152 ORTHO05D002737 1.4e-43 179.9 126 74.6
Mapoly0183s0006 Marchantia polymorpha HOM05D002152 ORTHO05D002737 8.9e-43 177.2 126 71.4
SHI16979 Sapria himalayana HOM05D002152 ORTHO05D002737 2.6e-42 175.6 128 72.7
Mapoly0159s0009 Marchantia polymorpha HOM05D002152 ORTHO05D002737 4.4e-42 174.9 126 70.6
CSS0031123 Camellia sinensis var. sinensis HOM05D002152 ORTHO05D002737 9.9e-42 173.7 102 87.3
Pp3c9_14050 Physcomitrium patens HOM05D002152 ORTHO05D002737 1.7e-41 172.9 126 72.2
Pp3c15_15500 Physcomitrium patens HOM05D002152 ORTHO05D002737 4.9e-41 171.4 129 72.1
AagrBONN_evm.TU.Sc2ySwM_362.1686 Anthoceros agrestis HOM05D002152 ORTHO05D002737 1.9e-40 169.5 125 69.6
PSO478G3219 Papaver somniferum HOM05D002152 ORTHO05D002737 3.9e-38 161.8 124 68.5
Peaxi162Scf00009g00026 Petunia axillaris HOM05D002152 ORTHO05D002737 7.6e-34 147.5 124 67.7
unitig_26.g9621 Utricularia gibba HOM05D002152 ORTHO05D002737 3.5e-31 138.7 71 93.0
Gohir.A11G001132 Gossypium hirsutum HOM05D002152 ORTHO05D002737 2.7e-23 112.5 58 94.8
SEGI_20310 Sequoiadendron giganteum HOM05D002152 ORTHO05D002737 6.9e-19 97.8 67 77.6
Cre13.g591400 Chlamydomonas reinhardtii HOM05D002152 ORTHO05D002737 3.2e-16 89.0 86 52.3
PRCOL_00000774 Prasinoderma coloniale HOM05D002152 ORTHO05D002737 1.0e-14 84.0 78 52.6
Gohir.A11G001066 Gossypium hirsutum HOM05D002152 ORTHO05D002737 3.7e-12 75.5 45 86.7
MCO01G326 Micromonas commoda HOM05D002152 ORTHO05D002737 1.4e-11 73.6 89 49.4
HPP92_004892 Vanilla planifolia HOM05D002152 ORTHO05D002737 2.6e-10 69.3 66 60.6
HPP92_004893 Vanilla planifolia HOM05D002152 ORTHO05D002737 1.0e-06 57.4 30 93.3
VMungo0464G1940 Vigna mungo HOM05D092872 ORTHO05D008631 6.7e-06 54.7 31 80.6


User provided reference genes

Program Settings