Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 2.4e-80 302.4 184 100.0
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 2.3e-62 242.7 177 91.5
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 8.7e-62 240.7 177 91.0
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.4e-59 232.6 175 88.0
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 2.8e-52 209.1 176 84.7
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 6.4e-49 198.0 176 83.0
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 3.0e-38 162.5 178 75.3
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 2.5e-29 132.9 174 60.9
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 5.7e-29 131.7 181 64.1
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 2.2e-28 129.8 178 59.0
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 2.8e-28 129.4 175 66.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 3.7e-28 129.0 180 55.6
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 1.4e-27 127.1 178 63.5
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.8e-27 126.7 178 60.7
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.8e-27 126.7 178 60.7
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 5.3e-27 125.2 176 59.7
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 9.0e-27 124.4 182 59.9
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.2e-26 124.0 172 62.2
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 5.9e-26 121.7 179 62.0
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.2e-25 119.8 171 53.8
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 5.0e-25 118.6 181 60.8
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 6.5e-25 118.2 178 57.3
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 8.5e-25 117.9 179 54.2
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.4e-24 117.1 174 54.0
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.9e-24 116.7 179 57.0
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.9e-24 116.7 176 58.0
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 3.2e-24 115.9 172 63.4
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 5.5e-24 115.2 179 45.3
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 2.1e-23 113.2 177 57.1
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 2.1e-23 113.2 184 56.5
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.7e-23 112.8 160 43.1
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 4.6e-23 112.1 182 58.2
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 4.6e-23 112.1 178 55.1
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.0e-22 110.9 173 58.4
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 2.3e-22 109.8 176 43.2
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 3.0e-22 109.4 141 48.2
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 3.0e-22 109.4 182 52.7
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 3.9e-22 109.0 178 51.7
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.9e-22 109.0 164 59.8
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 6.7e-22 108.2 174 50.6
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 6.7e-22 108.2 132 66.7
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.1e-21 107.5 174 51.7
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 1.5e-21 107.1 184 59.8
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.5e-21 107.1 132 68.9
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.5e-21 107.1 178 59.0
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 2.0e-21 106.7 180 58.9
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 4.3e-21 105.5 174 58.6
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 4.3e-21 105.5 132 65.2
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 7.4e-21 104.8 180 58.9
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 9.7e-21 104.4 159 64.2
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 2.8e-20 102.8 180 47.8
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 3.7e-20 102.4 181 59.1
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 6.3e-20 101.7 174 55.2
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 1.1e-19 100.9 180 53.3
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.4e-19 100.5 175 52.0
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.4e-19 100.5 180 58.3
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.4e-19 100.5 149 60.4
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 1.4e-19 100.5 153 56.2
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.8e-19 100.1 175 42.3
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.4e-19 99.8 134 50.0
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 2.4e-19 99.8 174 57.5
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 3.1e-19 99.4 125 55.2
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.1e-19 99.4 177 55.9
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.1e-19 99.4 177 55.9
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 5.3e-19 98.6 174 56.9
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 6.9e-19 98.2 172 54.7
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 6.9e-19 98.2 175 51.4
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 9.1e-19 97.8 168 56.5
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.2e-18 97.4 134 43.3
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.2e-18 97.4 134 43.3
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 1.2e-18 97.4 175 49.1
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 1.2e-18 97.4 153 56.9
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.5e-18 97.1 177 55.4
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.0e-18 96.7 175 58.3
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 2.6e-18 96.3 171 57.3
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 4.5e-18 95.5 121 52.9
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 4.5e-18 95.5 175 53.7
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 5.9e-18 95.1 151 62.3
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 5.9e-18 95.1 179 58.1
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 5.9e-18 95.1 173 56.1
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 1.3e-17 94.0 132 67.4
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 2.2e-17 93.2 170 57.6
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 2.9e-17 92.8 132 65.9
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 8.5e-17 91.3 177 39.0
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.9e-16 90.1 177 38.4
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.9e-16 90.1 177 55.4
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.2e-16 89.4 177 43.5
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 4.2e-16 89.0 172 57.0
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 7.2e-16 88.2 175 37.7
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 7.2e-16 88.2 175 37.7
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.2e-15 87.4 177 39.0
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.6e-15 87.0 177 36.7
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 1.6e-15 87.0 181 56.4
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.6e-15 87.0 86 87.2
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 2.1e-15 86.7 174 37.9
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 2.1e-15 86.7 174 37.9
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 2.1e-15 86.7 130 42.3
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 2.7e-15 86.3 130 41.5
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 2.7e-15 86.3 133 66.2
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 3.6e-15 85.9 135 44.4
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 3.6e-15 85.9 88 51.1
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 3.6e-15 85.9 88 51.1
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 3.6e-15 85.9 88 51.1
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 3.6e-15 85.9 152 59.9
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 4.7e-15 85.5 172 45.3
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 4.7e-15 85.5 150 61.3
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 7.9e-15 84.7 187 50.3
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 7.9e-15 84.7 97 48.5
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 1.0e-14 84.3 130 40.0
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.0e-14 84.3 89 49.4
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.4e-14 84.0 175 36.0
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.4e-14 84.0 171 53.2
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 1.8e-14 83.6 150 43.3
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.8e-14 83.6 160 38.1
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 6.7e-14 81.6 86 48.8
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 6.7e-14 81.6 135 43.7
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 6.7e-14 81.6 172 52.3
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 8.8e-14 81.3 177 38.4
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.5e-13 80.5 134 43.3
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 2.0e-13 80.1 179 36.3
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 2.0e-13 80.1 175 52.6
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 2.0e-13 80.1 86 82.6
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 4.4e-13 79.0 177 36.2
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 8.2e-12 74.7 130 42.3
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.1e-11 74.3 172 37.2
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.1e-11 74.3 131 41.2
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 3.1e-11 72.8 188 43.1
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 4.1e-11 72.4 140 39.3
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 2.6e-10 69.7 138 55.8
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 3.5e-10 69.3 184 49.5
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 4.5e-10 68.9 171 31.0
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 1.3e-09 67.4 127 41.7
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 1.9e-08 63.5 91 69.2
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 9.4e-08 61.2 175 49.1
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.6e-07 60.5 87 70.1
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 8.8e-06 54.7 69 84.1


User provided reference genes

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