Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 8.0e-45 183.3 90 100.0
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 6.8e-28 127.1 74 81.1
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 6.8e-28 127.1 74 81.1
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 6.8e-28 127.1 74 81.1
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 1.5e-27 125.9 74 79.7
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 2.0e-27 125.6 74 79.7
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 2.6e-27 125.2 74 79.7
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 2.6e-27 125.2 74 79.7
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 2.6e-27 125.2 73 80.8
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-27 124.8 74 81.1
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-27 124.8 74 81.1
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-27 124.8 74 81.1
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-27 124.8 74 81.1
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-27 124.8 74 81.1
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 3.4e-27 124.8 74 81.1
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 1.2e-24 116.3 88 67.0
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.6e-24 115.9 74 71.6
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 2.7e-24 115.2 74 70.3
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.7e-24 115.2 74 73.0
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.1e-23 110.9 74 68.9
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.1e-23 110.9 74 68.9
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.1e-23 110.9 74 68.9
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.1e-23 110.9 74 68.9
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.1e-23 110.9 74 68.9
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.1e-23 110.9 74 68.9
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.1e-23 110.9 74 68.9
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-22 109.0 74 67.6
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-22 109.0 74 67.6
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-22 109.0 74 67.6
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-22 109.0 74 67.6
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 5.6e-22 107.5 74 66.2
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 9.5e-22 106.7 74 64.9
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 1.2e-21 106.3 74 66.2
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 1.2e-21 106.3 74 66.2
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.6e-21 105.9 74 66.2
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 4.7e-21 104.4 60 78.3
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 1.1e-20 103.2 78 61.5
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-20 102.4 75 62.7
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 2.4e-20 102.1 74 64.9
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.4e-20 102.1 74 62.2
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 5.2e-20 100.9 74 66.2
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 2.6e-19 98.6 74 63.5
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 5.8e-19 97.4 74 62.2
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 5.8e-19 97.4 74 62.2
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 9.9e-19 96.7 74 63.5
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 9.9e-19 96.7 74 64.9
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 9.9e-19 96.7 74 64.9
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 2.2e-18 95.5 74 63.5
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 2.2e-18 95.5 74 63.5
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 2.2e-18 95.5 72 63.9
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 3.8e-18 94.7 74 58.1
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 4.9e-18 94.4 68 67.6
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 6.4e-18 94.0 74 60.8
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 6.4e-18 94.0 74 62.2
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.1e-17 93.2 74 59.5
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 1.4e-17 92.8 74 59.5
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.4e-17 92.8 74 60.8
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.9e-17 92.4 74 62.2
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.4e-17 92.0 74 60.8
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.4e-17 92.0 74 60.8
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 4.2e-17 91.3 61 63.9
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 5.4e-17 90.9 73 58.9
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 1.6e-16 89.4 74 56.8
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 3.5e-16 88.2 65 61.5
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-15 85.5 65 61.5
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 2.3e-15 85.5 74 56.8
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.0e-15 85.1 74 56.8
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.0e-15 85.1 57 70.2
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 4.3e-14 81.3 61 59.0
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.6e-13 79.3 65 60.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.6e-13 79.3 65 60.0
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 2.1e-13 79.0 58 67.2
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 2.1e-13 79.0 74 60.8
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.7e-13 77.8 91 48.4
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 6.2e-13 77.4 58 65.5
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.4e-12 76.3 69 50.7
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 2.4e-12 75.5 58 65.5
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.2e-11 73.2 65 55.4
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 2.0e-11 72.4 57 64.9
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 1.3e-10 69.7 70 50.0
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.7e-10 69.3 88 45.5
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 2.2e-10 68.9 47 63.8
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 1.4e-09 66.2 48 62.5
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 9.3e-09 63.5 42 69.0
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 9.3e-09 63.5 79 50.6
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.6e-08 62.8 57 54.4
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 1.6e-08 62.8 43 69.8
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 1.7e-07 59.3 38 73.7
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 6.6e-07 57.4 41 65.9
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 8.7e-07 57.0 45 64.4
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 2.5e-06 55.5 46 58.7
Migut.D01003 Erythranthe guttata HOM05D004473 ORTHO05D005652 3.3e-06 55.1 39 59.0
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 3.3e-06 55.1 57 47.4


User provided reference genes

Program Settings